mRNA_H-elongata_contig63043.13882.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A6H5L6P2_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6P2_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.820e-28 Identity = 49/62 (79.03%), Postives = 55/62 (88.71%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREV 186
VL CNPNAGYYESMV+AG+G RNWVSFY S GCDVF+FNYRGY RSGG+ SP+ INKDVRE+
Sbjct: 488 VLFCNPNAGYYESMVLAGEGGRNWVSFYTSVGCDVFLFNYRGYGRSGGKASPANINKDVREI 549
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A835YTB0_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 4.980e-16 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVM-AGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQHYK 201
VL CNPNAG+YE M + AG R+W S+Y + GC VF+FNYRG+ RS G P+P+++ D E Q+ +
Sbjct: 334 VLFCNPNAGFYEGMCLGAGTEHRDWASYYSAIGCHVFLFNYRGFGRSQGVPTPARLQADACEAVQYLR 401
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A7S1AQK0_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AQK0_NOCSC) HSP 1 Score: 72.8 bits (177), Expect = 2.550e-13 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKD 174
++ CNPNAGYYES+V+ +W++FY S GC+VF+FNY G+ RS G PSPS + D
Sbjct: 330 IIWCNPNAGYYESLVVES----HWLNFYLSCGCNVFVFNYSGFGRSTGSPSPSSLAAD 383
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A8J1ZLQ9_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZLQ9_9DINO) HSP 1 Score: 72.8 bits (177), Expect = 2.570e-13 Identity = 33/64 (51.56%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQ 192
V++CNPNAGYYES GD WV FY S C V +FNYRG+ RS G P + D R V Q
Sbjct: 353 VIMCNPNAGYYESTAFQGD----WVDFYLSLNCSVVLFNYRGFARSTGAVHPENVRADGRAVYQ 412
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A7S2RNC6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RNC6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.490e-13 Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQ 192
V+ CNPNAG YE A S +W+ FY GC V ++NYRGY RS G PSP+ N D+ E+ Q
Sbjct: 336 VIFCNPNAGLYEC-ANASPKSSDWIQFYTEMGCQVIVWNYRGYGRSTGLPSPASNNADIAELVQ 398
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A0V0QQS5_PSEPJ (Hydrolase_4 domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QQS5_PSEPJ) HSP 1 Score: 67.8 bits (164), Expect = 1.480e-11 Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQHYKLFF 210
++ CNPNAGYYE + + WV FY+ G ++ ++NYRGY RS G P+P +I KD ++ + + F
Sbjct: 302 LIYCNPNAGYYECLYYDSE----WVEFYQKLGMNIVLWNYRGYGRSEGNPTPQRIQKDSEQLVDYVRNEF 367
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A485LBE7_9STRA (Aste57867_18394 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBE7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.750e-11 Identity = 33/67 (49.25%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQHYK 201
VL+CNPN G YE D W+ FY G +VF+FNYRGY R G PSPS N D V H K
Sbjct: 382 VLLCNPNCGLYEFHHFQSD----WIQFYTKYGVNVFVFNYRGYGRCKGYPSPSANNMDGMAVVAHLK 444
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: F0WL56_9STRA (Uncharacterized protein AlNc14C141G7244 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL56_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.750e-11 Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQHYK 201
+L+CNPN G YE + D WV FY GCDV ++NYRGY R+ G P P+ N D + H K
Sbjct: 324 ILLCNPNGGLYEFHHIQTD----WVRFYIERGCDVLVYNYRGYGRNKGHPQPALNNADALAIIAHIK 386
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A6G0WU86_9STRA (AB hydrolase-1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU86_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 7.000e-11 Identity = 31/67 (46.27%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQHYK 201
VL+CNPN G YE D W+ FY G +VF+FNYRGY R G PSP N D + +H K
Sbjct: 374 VLLCNPNCGLYEFHHFQSD----WIQFYTKFGINVFVFNYRGYGRCKGYPSPHANNMDGMAIIEHLK 436
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Match: A0A7S2DCA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCA1_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 7.980e-11 Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 1
Query: 1 VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPSPSKINKDVREVSQHYK 201
VL CNPNAG YE + + +WV Y + G V FNYRGY RS G PSP++ + D ++ H +
Sbjct: 3 VLFCNPNAGLYECAASSTKAT-DWVQLYTALGFHVVFFNYRGYGRSTGIPSPTRNSADGAAIALHLR 68 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig63043.13882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig63043.13882.1 >prot_H-elongata_contig63043.13882.1 ID=prot_H-elongata_contig63043.13882.1|Name=mRNA_H-elongata_contig63043.13882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp VLICNPNAGYYESMVMAGDGSRNWVSFYKSAGCDVFMFNYRGYCRSGGRPback to top mRNA from alignment at H-elongata_contig63043:457..965- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig63043.13882.1 ID=mRNA_H-elongata_contig63043.13882.1|Name=mRNA_H-elongata_contig63043.13882.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=509bp|location=Sequence derived from alignment at H-elongata_contig63043:457..965- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig63043:457..965- >mRNA_H-elongata_contig63043.13882.1 ID=mRNA_H-elongata_contig63043.13882.1|Name=mRNA_H-elongata_contig63043.13882.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at H-elongata_contig63043:457..965- (Himanthalia elongata Himel1 dioecious)back to top |