mRNA_H-elongata_contig61557.13708.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A6H5KST8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST8_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.760e-40 Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
YVS NLHHWIDLIFGYKQRGPAA++AHNVFYYLTY GAVDLA IQDEGLRRATELQIAHFGQCPAQLF RPHPAR
Sbjct: 1984 YVSQNLHHWIDLIFGYKQRGPAAEKAHNVFYYLTYSGAVDLANIQDEGLRRATELQIAHFGQCPAQLFGRPHPAR 2058
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A835ZH49_9STRA (BEACH domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH49_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.090e-36 Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
+VS NLHHWIDLIFG+KQ+G AA +AHNVFYYLTYYGA+DL KI+D+ LRRATELQIAHFGQCP QLF+RPHP R
Sbjct: 282 HVSENLHHWIDLIFGHKQQGQAAVDAHNVFYYLTYYGAIDLTKIRDDALRRATELQIAHFGQCPMQLFSRPHPPR 356
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A7S2WRZ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRZ9_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.430e-32 Identity = 56/75 (74.67%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
+VS+ LHHWIDLIFGY+QRG AA +AHNVFYYLTY G VD+++I+D +RRATELQIAHFGQCP QLF RPHP R
Sbjct: 695 HVSSQLHHWIDLIFGYQQRGQAAVQAHNVFYYLTYAGCVDISQIEDPVMRRATELQIAHFGQCPQQLFTRPHPTR 769
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A7S1ZT33_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZT33_TRICV) HSP 1 Score: 117 bits (293), Expect = 8.310e-32 Identity = 54/74 (72.97%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 4 VSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
SA+L WIDLIFG KQ+GP + EAHNVF+YLTYYG+VD+A I+DEGLRR+TE QIAHFGQCP QLF RPH A+
Sbjct: 71 ASASLPRWIDLIFGRKQQGPESVEAHNVFFYLTYYGSVDVASIEDEGLRRSTEDQIAHFGQCPMQLFWRPHVAK 144
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A7S3MHR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHR3_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.580e-31 Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
YV+ +LH WIDLIFGYKQRGP A EA+NVFYYLTYYG+V+ I+DE LRRATELQIAHFGQ P QLF PHPAR
Sbjct: 137 YVTTHLHEWIDLIFGYKQRGPDAVEANNVFYYLTYYGSVNHYMIKDESLRRATELQIAHFGQTPMQLFKVPHPAR 211
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A7S0NBQ1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0NBQ1_9CRYP) HSP 1 Score: 114 bits (285), Expect = 3.000e-31 Identity = 54/75 (72.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
+VSANLHHWIDLIFG KQRGPAA+EA NVFYYLTY G DL I D GLRR+ E QI FGQ P QLF +PHP R
Sbjct: 15 FVSANLHHWIDLIFGCKQRGPAAEEAVNVFYYLTYEGGADLDAIADPGLRRSAEAQIRSFGQTPRQLFTKPHPQR 89
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A482SZ90_9ARCH (DUF4704 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZ90_9ARCH) HSP 1 Score: 124 bits (310), Expect = 3.040e-31 Identity = 59/75 (78.67%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
YV+ +LH WIDLIFGYKQRGP A EA NVFYYLTYYGAVD I+DE LRRATELQIAHFGQ P QLF PHPAR
Sbjct: 1939 YVTEHLHEWIDLIFGYKQRGPDAVEAKNVFYYLTYYGAVDHYMIEDETLRRATELQIAHFGQVPMQLFKTPHPAR 2013
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: M4BVS8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVS8_HYAAE) HSP 1 Score: 122 bits (305), Expect = 1.430e-30 Identity = 56/75 (74.67%), Postives = 63/75 (84.00%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
YVS++LH WIDLIFGYKQRG AA +A+NVFYYLTYYG VDL K++D LR + ELQIAHFGQCP QLF PHPAR
Sbjct: 1150 YVSSHLHSWIDLIFGYKQRGRAALQANNVFYYLTYYGVVDLDKVEDPCLRESMELQIAHFGQCPMQLFAAPHPAR 1224
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A7S2AUL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AUL0_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.080e-30 Identity = 56/75 (74.67%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
+VS NLH WIDLIFG KQRGP+A +A NVFYYLTYYG+VDLA I D +R A E+QIAHFGQCP QLF RPHPAR
Sbjct: 275 HVSRNLHKWIDLIFGEKQRGPSAVKADNVFYYLTYYGSVDLASITDSTMRLAYEMQIAHFGQCPMQLFTRPHPAR 349
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Match: A0A3M6VIH4_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIH4_9STRA) HSP 1 Score: 120 bits (301), Expect = 4.990e-30 Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 1 YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRRATELQIAHFGQCPAQLFNRPHPAR 225
YVS++LH WIDLIFGYKQRG A+ +A+NVFYYLTYYG VDL K++D LR + ELQIAHFGQCP QLF PHP R
Sbjct: 2185 YVSSHLHSWIDLIFGYKQRGRASLQANNVFYYLTYYGVVDLDKVEDSSLRESMELQIAHFGQCPMQLFAAPHPKR 2259 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61557.13708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61557.13708.1 >prot_H-elongata_contig61557.13708.1 ID=prot_H-elongata_contig61557.13708.1|Name=mRNA_H-elongata_contig61557.13708.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp YVSANLHHWIDLIFGYKQRGPAAKEAHNVFYYLTYYGAVDLAKIQDEGLRback to top mRNA from alignment at H-elongata_contig61557:1327..2492+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61557.13708.1 ID=mRNA_H-elongata_contig61557.13708.1|Name=mRNA_H-elongata_contig61557.13708.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1166bp|location=Sequence derived from alignment at H-elongata_contig61557:1327..2492+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61557:1327..2492+ >mRNA_H-elongata_contig61557.13708.1 ID=mRNA_H-elongata_contig61557.13708.1|Name=mRNA_H-elongata_contig61557.13708.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig61557:1327..2492+ (Himanthalia elongata Himel1 dioecious)back to top |