mRNA_H-elongata_contig61511.13706.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: D7FZW7_ECTSI (DUF2470 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW7_ECTSI) HSP 1 Score: 349 bits (895), Expect = 5.420e-119 Identity = 172/213 (80.75%), Postives = 186/213 (87.32%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMS 639
YPSGSVVGF+LDD+GRP+FAFSSMS+HT DL +DSRVSLTVTAA FKGAADGRVS+IGDVNKVP+EDL SVREMYK KHP AYW+DFGDF LMRMDTIKAMRFVGGFAMAG V P DY+ T PD + EFS PI HMNDDHS TT+ M+ H+ITGG EV SAQITAVDRLGMYVLVGM DGQSGKLRLPF RPAESR DVKTLIVEMT AM+
Sbjct: 87 YPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPEEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 299
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A836CG39_9STRA (DUF2470 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG39_9STRA) HSP 1 Score: 285 bits (728), Expect = 7.580e-94 Identity = 138/211 (65.40%), Postives = 167/211 (79.15%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEA 633
YP+GSVVGF LDD GRP+FAFS+MS+HT DL +D R S+T+ AANFKGA+DGRV++IGDV +VP++++ +VR YK KHP A+W+DFGDFS RMDTIKA+RFVGGFAMAG + DY+ATKPDPI F+ PI+THMN DHS +T MV+HYITGG +V SA + VDR GM VLV MG G+SGKLRLPF PA+ R VK IVEMT A
Sbjct: 71 YPNGSVVGFGLDDAGRPLFAFSTMSAHTSDLGADGRASMTIMAANFKGASDGRVTLIGDVGRVPEDEIEAVRTSYKVKHPNAFWVDFGDFSWFRMDTIKAIRFVGGFAMAGDITSEDYLATKPDPIAGFAEPIMTHMNSDHSDSTAAMVEHYITGGAKVDSATLVGVDRKGMNVLVAMG-GESGKLRLPFPSPADDRKAVKDRIVEMTRAA 280
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S3BKG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BKG2_9EUKA) HSP 1 Score: 242 bits (617), Expect = 1.140e-77 Identity = 127/220 (57.73%), Postives = 159/220 (72.27%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLL---SDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMSTA 645
YPSGS+VGFALDD G P+F FS+MSSHT+DLL S + +L VTA F+GAADGRV++IGDV + E++ +RE+YK KHP A+W DFGDFS RM+ +KA+ FVGGFA AGS++P DYM T DPI F+ P++ HMNDDHS +T MVQHYI G +V A++ +DRLG V GQ+ KLRLPF R AESR DVKTLIVEMT +++ A
Sbjct: 1 YPSGSLVGFALDDHGLPVFCFSTMSSHTKDLLASNSGGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEKDGLRELYKTKHPNAFWADFGDFSFFRMEELKAVNFVGGFARAGSIKPEDYMETSVDPIQAFAAPVMGHMNDDHSSSTIAMVQHYI-GLPQVEKAELVQLDRLGFMVQCTR-LGQTFKLRLPFPRAAESRKDVKTLIVEMTQTSLANA 218
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S4EVY0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVY0_CHRCT) HSP 1 Score: 244 bits (624), Expect = 7.170e-77 Identity = 125/211 (59.24%), Postives = 158/211 (74.88%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSD---SRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMT 624
+PSGSVVGFA+DD+G P+F FS MS H +DLL+ + +LTVTA +FKGAA+GRV+++G V +VP ++ +RE+Y+AKHP A+W+DFGDFS +MD +KA+RFVGGFA AG + P +YM + DPI F+ P++ HMN DHS T MVQHYI G EV A++ A+DRLGM V V GQS KLRLPF RPAESR DVKTLIVEMT
Sbjct: 157 FPSGSVVGFAIDDKGLPIFCFSGMSGHAQDLLASPDAAPAALTVTANDFKGAAEGRVTLVGTVRRVPSDEADPLREIYRAKHPNAFWVDFGDFSWFKMDELKAVRFVGGFARAGDMTPEEYMQAEVDPIQAFAKPVMEHMNADHSDATTLMVQHYI-GLPEVEDAKVAALDRLGMTVQVTR-KGQSFKLRLPFPRPAESRKDVKTLIVEMT 365
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S4FQ63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQ63_9EUGL) HSP 1 Score: 241 bits (614), Expect = 2.240e-75 Identity = 120/215 (55.81%), Postives = 155/215 (72.09%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMSTA 645
YPSGS+VG+A DD+GRP+F+FS+MSSHT+D+ D RVSLTVT FKGAADGRVS+ GD+ +VP E+ +V MY KHP A+W+ FGDFS RM+ IK +R++GGFA AGS+ P +Y AT PD I F+TP+++HMN DH MV HY+ +V +A I +DRLGM ++V +GQS KLRLPF RPA +R +VK LIVEMT + A
Sbjct: 156 YPSGSIVGYAPDDKGRPVFSFSTMSSHTQDIQKDPRVSLTVTVEGFKGAADGRVSLTGDLVRVPKEEKEAVAAMYLKKHPDAFWVQFGDFSWWRMENIKTIRYIGGFARAGSITPEEYEATAPDAIAAFATPVMSHMNADHGDANVAMVNHYLP--IQVEAANIVGLDRLGMDMMVTR-EGQSFKLRLPFPRPATNRKEVKDLIVEMTKASAKAA 367
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S3U682_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U682_9SPIT) HSP 1 Score: 238 bits (606), Expect = 2.940e-74 Identity = 123/217 (56.68%), Postives = 159/217 (73.27%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSD---SRVSLTVTAANFKGAADGRVSIIGDVNKVPDED-LASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMS 639
YPSGS+VGFA DD+G P+F FS+MSSHT+DL+ D ++ +LTVTA F+GAADGRV+++GDV +V DE+ L ++R+ Y+ KHP A+W+DFGDFS RM +KA+RFVGGFA AG + P DY A DPI F+ P++ HMN+DHS +T MV HYI G +V A + A+DRLG V V GQ+ KLRLPF R AE R DVK LIV+MT E++S
Sbjct: 123 YPSGSLVGFATDDKGLPLFCFSAMSSHTQDLMRDPKGAKAALTVTATGFEGAADGRVTLVGDVARVKDEEELVTLRKTYREKHPDAFWVDFGDFSWWRMRELKAVRFVGGFARAGDIAPDDYQAATVDPIQAFAKPVMNHMNEDHSDSTIAMVMHYI-GLNQVEKASLVALDRLGFMVQVTR-LGQTFKLRLPFPRAAEDRKDVKNLIVQMTQESLS 337
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A6T8CG84_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8CG84_9EUKA) HSP 1 Score: 227 bits (578), Expect = 4.550e-71 Identity = 116/215 (53.95%), Postives = 153/215 (71.16%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMS 639
YPSGS+VGFA D++G P+F FS+MS HT+DL + +L VTA F+GAADGRV++IGDV + E++ + ++E+Y+AKHP A+W+DFGDF+ RM +KA+ FVGGFA AG+ PADYM DPI F+ P++ HMN DHS +T MV HYI G +V A++ +DRLG V V GQ+ KLRLPF R AE R DVKTLIV+MT ++S
Sbjct: 50 YPSGSLVGFATDEKGLPVFCFSAMSGHTKDLAKAGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEADGLKELYRAKHPNAFWVDFGDFTWYRMTELKAVNFVGGFARAGNPSPADYMDASVDPIQAFAAPVMGHMNADHSESTIAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTR-TGQTFKLRLPFPRAAEDRKDVKTLIVQMTQASLS 262
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A8J5XCY6_DIALT (DUF2470 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCY6_DIALT) HSP 1 Score: 227 bits (578), Expect = 1.130e-70 Identity = 117/209 (55.98%), Postives = 149/209 (71.29%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDE-DLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMT 624
YP+G+VVGFA G P+F SS+S HT+DLL+ S+ SLTVTA NF GA RV+++GDV K+ + D+A+ RE+Y AKH AYWIDFGDF+ RM ++ +RFVGGFA A V PADY+AT PD ++ +S + +HMNDDH +T MV+HY+ G + + A I +VD LGM V V G+S KLRLPF RPAESR DVK LIVEMT
Sbjct: 103 YPAGAVVGFAPGADGLPIFFLSSISGHTQDLLASSKASLTVTAGNFDGADSARVNLLGDVRKLTEPADVAAAREVYLAKHKDAYWIDFGDFAAFRMTELRKVRFVGGFAGAADVAPADYLATAPDAVLAYSAGVASHMNDDHRDSTAAMVRHYV-GLSGIEDAHIMSVDSLGMQVRVKRAGGESFKLRLPFPRPAESRKDVKDLIVEMT 310
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7R9ZB21_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB21_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.640e-70 Identity = 118/216 (54.63%), Postives = 149/216 (68.98%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGM-----GDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEA 633
YP GSVVGFA D++GRP+F FS MS+HT+DLL+D R SLT+ A FKGAADGRV+++G V+KVP E+ +++++Y KHP A+W+ FGDF+ RMD IK +RFVGGFA AGSV P +Y KPDPI F + + HMN+DH +T M+ I G +V A IT+VD LGMYV V Q KLRLPF R A+ R DVK +IVEMT A
Sbjct: 168 YPGGSVVGFAPDEEGRPVFIFSGMSTHTQDLLADPRCSLTIAAKEFKGAADGRVNLMGKVSKVPPEECEALKQLYLEKHPGAFWVHFGDFNWFRMDDIKDIRFVGGFARAGSVTPQEYSEAKPDPISAFGSHVANHMNEDHMDSTIAMIADQIPG-MDVTDAVITSVDSLGMYVKVSRTPRASDQPQQFKLRLPFPRQAKDRKDVKDIIVEMTRSA 382
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S0LER7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LER7_9EUKA) HSP 1 Score: 226 bits (575), Expect = 1.670e-69 Identity = 119/221 (53.85%), Postives = 154/221 (69.68%), Query Frame = 1
Query: 1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLL-------SDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAM 636
YPSG++VGFA D++G P F FS+MSSHT+DL+ S + +L VTA F+GAADGRV++IGDV++V E + +RE+Y+ KHP A+W+DFGDF+ RM +KA+ FVGGFA AGS+ P YM DPI F+ P+++HMNDDHS +T MV HYI G +V A++ +DRLG V V GQ+ KLRLPF RPA R DVKTLIVEMT A+
Sbjct: 133 YPSGALVGFAHDERGLPFFCFSAMSSHTKDLVAAERSCESGGKAALCVTAKGFEGAADGRVTLIGDVSRVKKEQVEEQGLRELYRQKHPNAFWVDFGDFTFYRMHELKAINFVGGFARAGSIDPEAYMNAVIDPIQAFAAPVMSHMNDDHSSSTTAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTR-LGQTFKLRLPFPRPAGDRKDVKTLIVEMTRAAL 351 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig61511.13706.1 >prot_H-elongata_contig61511.13706.1 ID=prot_H-elongata_contig61511.13706.1|Name=mRNA_H-elongata_contig61511.13706.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAAback to top mRNA from alignment at H-elongata_contig61511:210..3143- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig61511.13706.1 ID=mRNA_H-elongata_contig61511.13706.1|Name=mRNA_H-elongata_contig61511.13706.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2934bp|location=Sequence derived from alignment at H-elongata_contig61511:210..3143- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig61511:210..3143- >mRNA_H-elongata_contig61511.13706.1 ID=mRNA_H-elongata_contig61511.13706.1|Name=mRNA_H-elongata_contig61511.13706.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1308bp|location=Sequence derived from alignment at H-elongata_contig61511:210..3143- (Himanthalia elongata Himel1 dioecious)back to top |