mRNA_H-elongata_contig61511.13706.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig61511.13706.1
Unique NamemRNA_H-elongata_contig61511.13706.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: D7FZW7_ECTSI (DUF2470 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW7_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 5.420e-119
Identity = 172/213 (80.75%), Postives = 186/213 (87.32%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMS 639
            YPSGSVVGF+LDD+GRP+FAFSSMS+HT DL +DSRVSLTVTAA FKGAADGRVS+IGDVNKVP+EDL SVREMYK KHP AYW+DFGDF LMRMDTIKAMRFVGGFAMAG V P DY+ T PD + EFS PI  HMNDDHS TT+ M+ H+ITGG EV SAQITAVDRLGMYVLVGM DGQSGKLRLPF RPAESR DVKTLIVEMT  AM+
Sbjct:   87 YPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPEEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 299          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A836CG39_9STRA (DUF2470 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG39_9STRA)

HSP 1 Score: 285 bits (728), Expect = 7.580e-94
Identity = 138/211 (65.40%), Postives = 167/211 (79.15%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEA 633
            YP+GSVVGF LDD GRP+FAFS+MS+HT DL +D R S+T+ AANFKGA+DGRV++IGDV +VP++++ +VR  YK KHP A+W+DFGDFS  RMDTIKA+RFVGGFAMAG +   DY+ATKPDPI  F+ PI+THMN DHS +T  MV+HYITGG +V SA +  VDR GM VLV MG G+SGKLRLPF  PA+ R  VK  IVEMT  A
Sbjct:   71 YPNGSVVGFGLDDAGRPLFAFSTMSAHTSDLGADGRASMTIMAANFKGASDGRVTLIGDVGRVPEDEIEAVRTSYKVKHPNAFWVDFGDFSWFRMDTIKAIRFVGGFAMAGDITSEDYLATKPDPIAGFAEPIMTHMNSDHSDSTAAMVEHYITGGAKVDSATLVGVDRKGMNVLVAMG-GESGKLRLPFPSPADDRKAVKDRIVEMTRAA 280          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S3BKG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BKG2_9EUKA)

HSP 1 Score: 242 bits (617), Expect = 1.140e-77
Identity = 127/220 (57.73%), Postives = 159/220 (72.27%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLL---SDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMSTA 645
            YPSGS+VGFALDD G P+F FS+MSSHT+DLL   S  + +L VTA  F+GAADGRV++IGDV +   E++    +RE+YK KHP A+W DFGDFS  RM+ +KA+ FVGGFA AGS++P DYM T  DPI  F+ P++ HMNDDHS +T  MVQHYI G  +V  A++  +DRLG  V      GQ+ KLRLPF R AESR DVKTLIVEMT  +++ A
Sbjct:    1 YPSGSLVGFALDDHGLPVFCFSTMSSHTKDLLASNSGGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEKDGLRELYKTKHPNAFWADFGDFSFFRMEELKAVNFVGGFARAGSIKPEDYMETSVDPIQAFAAPVMGHMNDDHSSSTIAMVQHYI-GLPQVEKAELVQLDRLGFMVQCTR-LGQTFKLRLPFPRAAESRKDVKTLIVEMTQTSLANA 218          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S4EVY0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVY0_CHRCT)

HSP 1 Score: 244 bits (624), Expect = 7.170e-77
Identity = 125/211 (59.24%), Postives = 158/211 (74.88%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSD---SRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMT 624
            +PSGSVVGFA+DD+G P+F FS MS H +DLL+    +  +LTVTA +FKGAA+GRV+++G V +VP ++   +RE+Y+AKHP A+W+DFGDFS  +MD +KA+RFVGGFA AG + P +YM  + DPI  F+ P++ HMN DHS  T  MVQHYI G  EV  A++ A+DRLGM V V    GQS KLRLPF RPAESR DVKTLIVEMT
Sbjct:  157 FPSGSVVGFAIDDKGLPIFCFSGMSGHAQDLLASPDAAPAALTVTANDFKGAAEGRVTLVGTVRRVPSDEADPLREIYRAKHPNAFWVDFGDFSWFKMDELKAVRFVGGFARAGDMTPEEYMQAEVDPIQAFAKPVMEHMNADHSDATTLMVQHYI-GLPEVEDAKVAALDRLGMTVQVTR-KGQSFKLRLPFPRPAESRKDVKTLIVEMT 365          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S4FQ63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQ63_9EUGL)

HSP 1 Score: 241 bits (614), Expect = 2.240e-75
Identity = 120/215 (55.81%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMSTA 645
            YPSGS+VG+A DD+GRP+F+FS+MSSHT+D+  D RVSLTVT   FKGAADGRVS+ GD+ +VP E+  +V  MY  KHP A+W+ FGDFS  RM+ IK +R++GGFA AGS+ P +Y AT PD I  F+TP+++HMN DH      MV HY+    +V +A I  +DRLGM ++V   +GQS KLRLPF RPA +R +VK LIVEMT  +   A
Sbjct:  156 YPSGSIVGYAPDDKGRPVFSFSTMSSHTQDIQKDPRVSLTVTVEGFKGAADGRVSLTGDLVRVPKEEKEAVAAMYLKKHPDAFWVQFGDFSWWRMENIKTIRYIGGFARAGSITPEEYEATAPDAIAAFATPVMSHMNADHGDANVAMVNHYLP--IQVEAANIVGLDRLGMDMMVTR-EGQSFKLRLPFPRPATNRKEVKDLIVEMTKASAKAA 367          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S3U682_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U682_9SPIT)

HSP 1 Score: 238 bits (606), Expect = 2.940e-74
Identity = 123/217 (56.68%), Postives = 159/217 (73.27%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSD---SRVSLTVTAANFKGAADGRVSIIGDVNKVPDED-LASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMS 639
            YPSGS+VGFA DD+G P+F FS+MSSHT+DL+ D   ++ +LTVTA  F+GAADGRV+++GDV +V DE+ L ++R+ Y+ KHP A+W+DFGDFS  RM  +KA+RFVGGFA AG + P DY A   DPI  F+ P++ HMN+DHS +T  MV HYI G  +V  A + A+DRLG  V V    GQ+ KLRLPF R AE R DVK LIV+MT E++S
Sbjct:  123 YPSGSLVGFATDDKGLPLFCFSAMSSHTQDLMRDPKGAKAALTVTATGFEGAADGRVTLVGDVARVKDEEELVTLRKTYREKHPDAFWVDFGDFSWWRMRELKAVRFVGGFARAGDIAPDDYQAATVDPIQAFAKPVMNHMNEDHSDSTIAMVMHYI-GLNQVEKASLVALDRLGFMVQVTR-LGQTFKLRLPFPRAAEDRKDVKNLIVQMTQESLS 337          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A6T8CG84_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8CG84_9EUKA)

HSP 1 Score: 227 bits (578), Expect = 4.550e-71
Identity = 116/215 (53.95%), Postives = 153/215 (71.16%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAMS 639
            YPSGS+VGFA D++G P+F FS+MS HT+DL    + +L VTA  F+GAADGRV++IGDV +   E++ +  ++E+Y+AKHP A+W+DFGDF+  RM  +KA+ FVGGFA AG+  PADYM    DPI  F+ P++ HMN DHS +T  MV HYI G  +V  A++  +DRLG  V V    GQ+ KLRLPF R AE R DVKTLIV+MT  ++S
Sbjct:   50 YPSGSLVGFATDEKGLPVFCFSAMSGHTKDLAKAGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEADGLKELYRAKHPNAFWVDFGDFTWYRMTELKAVNFVGGFARAGNPSPADYMDASVDPIQAFAAPVMGHMNADHSESTIAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTR-TGQTFKLRLPFPRAAEDRKDVKTLIVQMTQASLS 262          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A8J5XCY6_DIALT (DUF2470 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCY6_DIALT)

HSP 1 Score: 227 bits (578), Expect = 1.130e-70
Identity = 117/209 (55.98%), Postives = 149/209 (71.29%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDE-DLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMT 624
            YP+G+VVGFA    G P+F  SS+S HT+DLL+ S+ SLTVTA NF GA   RV+++GDV K+ +  D+A+ RE+Y AKH  AYWIDFGDF+  RM  ++ +RFVGGFA A  V PADY+AT PD ++ +S  + +HMNDDH  +T  MV+HY+ G + +  A I +VD LGM V V    G+S KLRLPF RPAESR DVK LIVEMT
Sbjct:  103 YPAGAVVGFAPGADGLPIFFLSSISGHTQDLLASSKASLTVTAGNFDGADSARVNLLGDVRKLTEPADVAAAREVYLAKHKDAYWIDFGDFAAFRMTELRKVRFVGGFAGAADVAPADYLATAPDAVLAYSAGVASHMNDDHRDSTAAMVRHYV-GLSGIEDAHIMSVDSLGMQVRVKRAGGESFKLRLPFPRPAESRKDVKDLIVEMT 310          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7R9ZB21_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB21_9STRA)

HSP 1 Score: 229 bits (583), Expect = 1.640e-70
Identity = 118/216 (54.63%), Postives = 149/216 (68.98%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGM-----GDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEA 633
            YP GSVVGFA D++GRP+F FS MS+HT+DLL+D R SLT+ A  FKGAADGRV+++G V+KVP E+  +++++Y  KHP A+W+ FGDF+  RMD IK +RFVGGFA AGSV P +Y   KPDPI  F + +  HMN+DH  +T  M+   I G  +V  A IT+VD LGMYV V          Q  KLRLPF R A+ R DVK +IVEMT  A
Sbjct:  168 YPGGSVVGFAPDEEGRPVFIFSGMSTHTQDLLADPRCSLTIAAKEFKGAADGRVNLMGKVSKVPPEECEALKQLYLEKHPGAFWVHFGDFNWFRMDDIKDIRFVGGFARAGSVTPQEYSEAKPDPISAFGSHVANHMNEDHMDSTIAMIADQIPG-MDVTDAVITSVDSLGMYVKVSRTPRASDQPQQFKLRLPFPRQAKDRKDVKDIIVEMTRSA 382          
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Match: A0A7S0LER7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LER7_9EUKA)

HSP 1 Score: 226 bits (575), Expect = 1.670e-69
Identity = 119/221 (53.85%), Postives = 154/221 (69.68%), Query Frame = 1
Query:    1 YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLL-------SDSRVSLTVTAANFKGAADGRVSIIGDVNKVPDEDLAS--VREMYKAKHPKAYWIDFGDFSLMRMDTIKAMRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQHYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDVKTLIVEMTNEAM 636
            YPSG++VGFA D++G P F FS+MSSHT+DL+       S  + +L VTA  F+GAADGRV++IGDV++V  E +    +RE+Y+ KHP A+W+DFGDF+  RM  +KA+ FVGGFA AGS+ P  YM    DPI  F+ P+++HMNDDHS +T  MV HYI G  +V  A++  +DRLG  V V    GQ+ KLRLPF RPA  R DVKTLIVEMT  A+
Sbjct:  133 YPSGALVGFAHDERGLPFFCFSAMSSHTKDLVAAERSCESGGKAALCVTAKGFEGAADGRVTLIGDVSRVKKEQVEEQGLRELYRQKHPNAFWVDFGDFTFYRMHELKAINFVGGFARAGSIDPEAYMNAVIDPIQAFAAPVMSHMNDDHSSSTTAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTR-LGQTFKLRLPFPRPAGDRKDVKTLIVEMTRAAL 351          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig61511.13706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW7_ECTSI5.420e-11980.75DUF2470 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CG39_9STRA7.580e-9465.40DUF2470 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S3BKG2_9EUKA1.140e-7757.73Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4EVY0_CHRCT7.170e-7759.24Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4FQ63_9EUGL2.240e-7555.81Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3U682_9SPIT2.940e-7456.68Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A6T8CG84_9EUKA4.550e-7153.95Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A8J5XCY6_DIALT1.130e-7055.98DUF2470 domain-containing protein n=1 Tax=Diacrone... [more]
A0A7R9ZB21_9STRA1.640e-7054.63Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0LER7_9EUKA1.670e-6953.85Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig61511contigH-elongata_contig61511:210..3143 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.9
Seed ortholog evalue4.3e-94
Seed eggNOG ortholog2880.D7FZW7
EggNOG free text desc.Protein of unknown function (DUF2470)
EggNOG OGs2QV7B@2759,COG0748@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFMN-binding split barrel
Ec32 orthologEc-22_003810.1
Exons5
Model size654
Cds size654
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig61511.13706.1prot_H-elongata_contig61511.13706.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig61511 210..3143 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930993.0618804-CDS-H-elongata_contig61511:209..3891622930993.0618804-CDS-H-elongata_contig61511:209..389Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 210..389 -
1691679653.9936376-CDS-H-elongata_contig61511:209..3891691679653.9936376-CDS-H-elongata_contig61511:209..389Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 210..389 -
1622930993.079199-CDS-H-elongata_contig61511:811..9361622930993.079199-CDS-H-elongata_contig61511:811..936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 812..936 -
1691679654.004569-CDS-H-elongata_contig61511:811..9361691679654.004569-CDS-H-elongata_contig61511:811..936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 812..936 -
1622930993.0922186-CDS-H-elongata_contig61511:1405..15681622930993.0922186-CDS-H-elongata_contig61511:1405..1568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 1406..1568 -
1691679654.0117595-CDS-H-elongata_contig61511:1405..15681691679654.0117595-CDS-H-elongata_contig61511:1405..1568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 1406..1568 -
1622930993.1069674-CDS-H-elongata_contig61511:2391..24361622930993.1069674-CDS-H-elongata_contig61511:2391..2436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 2392..2436 -
1691679654.01948-CDS-H-elongata_contig61511:2391..24361691679654.01948-CDS-H-elongata_contig61511:2391..2436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 2392..2436 -
1622930993.123222-CDS-H-elongata_contig61511:3002..31431622930993.123222-CDS-H-elongata_contig61511:3002..3143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 3003..3143 -
1691679654.0276346-CDS-H-elongata_contig61511:3002..31431691679654.0276346-CDS-H-elongata_contig61511:3002..3143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig61511 3003..3143 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig61511.13706.1

>prot_H-elongata_contig61511.13706.1 ID=prot_H-elongata_contig61511.13706.1|Name=mRNA_H-elongata_contig61511.13706.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
YPSGSVVGFALDDQGRPMFAFSSMSSHTRDLLSDSRVSLTVTAANFKGAA
DGRVSIIGDVNKVPDEDLASVREMYKAKHPKAYWIDFGDFSLMRMDTIKA
MRFVGGFAMAGSVQPADYMATKPDPIVEFSTPILTHMNDDHSGTTKTMVQ
HYITGGTEVASAQITAVDRLGMYVLVGMGDGQSGKLRLPFSRPAESRGDV
KTLIVEMTNEAMSTAGN*
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mRNA from alignment at H-elongata_contig61511:210..3143-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig61511.13706.1 ID=mRNA_H-elongata_contig61511.13706.1|Name=mRNA_H-elongata_contig61511.13706.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2934bp|location=Sequence derived from alignment at H-elongata_contig61511:210..3143- (Himanthalia elongata Himel1 dioecious)
TACCCGAGCGGTTCAGTTGTGGGGTTCGCGCTCGACGATCAGGGGCGGCC CATGTTCGCCTTCAGCTCGATGAGCTCGCACACCCGCGACTTACTGTCGG ACTCTCGCGTCAGCCTCACCGTCACGGCTGCCAACTTCAAGGTCGCCGCA TTGTGTTCGATACTGTCTGCACTGTACTCTGTATTATGCGAAGATAGCAG TCGTAACGCCTCCCAGGTTTTGCAGTCGTTGCCCTCCCCCCTCCCGCCGC TCCTTTACCAGCAACATTGTTTGAATCGTGAAATGGCTTCACGCGATGCT GTTTTTCTTTGCAGAATGAGTTTGCGGTTGAAAAAAGTATTTTTATATCC TGGTCCGATACTAGAGTGCAGAGAAGATTGCCGCGGAGCATGCGCCCCTT TGATGTCGAAGTGAAACATATCGTTTGCGAGTACCTCGACGACGACGACC ATTTTTTTTTTATGCGTTTGCTTTTTGGGTTATTTGATTGTTTAAAGGGG GGTGTTCCTGCAGAGTGGCCATAATGCCTAGCGACGCCTGGTGATGACGT CGGAGCATCGTGTGGGTTCTCTTACTGTATTCTACCCCCCGCGCGCGCTT ACAGGCGCAAGACGTGAAAATTGATAATTTTGCTGCTTGTTCTAGATCCT TCCCCGCCCCGCCCCGCCCCCTGCCTCCTCCGACTTCCATCTCCCACGGT GCTACAGGGGGCAGCTGACGGCCGAGTGAGCATAATCGGAGACGTGAACA AGGTGAAATCCGATTACCGAACAGTCATACGGCCTCTGTAATATCCTAGG ACTGGAAGGCACTCGTCTCGTCTCGTCTCGAGGTGGTGCGACGGTTGAAG AAATCAACCAGGATTAATTCCTGCCTAAAAACACGTTGTAGTACTATTGG TGTGTGTGTGTGTGTGTGTAATATTTCGCAGTTGTAATCGTGAGCTCGAT TCTTGCCATAAAACGTGGAGCACGGGATACATTGATGGACGAGGTGTGAG TGCCGAGCTTGCATCGCGATAAAAATAAGAAAAAACGTAGCAGGCGTTAC AACCGACCGGGGAGGGATGGATGGGTTGATGATTCCTTAGGGCCACAGAC TATGACGGGATGGAATCGGCAACCAAGCACGTTGGAAGGCAGATCAGCAA AAATTGATAATATTTGGAAGAATGTGGTTTGTCCGCGCCCCATCCTCTAG AGCTATTCCCACACCCTTTATTTTTACTTGAACATTTGAGTCCTCCGGAG AATCGGGCGCCGTTTGTGTGTGTGTATGTGTGTGTGTGTTACGACATGGC GAAGCAACCTCGGGGATGGCTGTGCGTTTGTTTTTTACTTGAAACTATTC TATTAAGAAGAGAGGCCGGAAACGGATCCGTATCCATAAATAATAGGGGT ATGGTACATATCTTTGAGATAATCGGTTCGTGCTTCGATCGAGGACCCCA TCTTCCCGAACTCTTTCCGCAAGCGCTCTTTCGACCACACTACGCCAGTC CTTCGCTATTTAACTGCACGAAAAGCGGCCGACTTGACGTTTTGCGCGGC ATGCCTTGCCTTGGTGTCTAAGTAGGTCCCCGACGAGGATCTGGCCAGCG TTCGCGAGATGTACAAGGCGAAGCACCCGAAGGCGTACTGGATCGACTTC GGCGACTTCTCGCTCATGCGCATGGACACGATCAAGGCTATGCGCTTCGT CGGGGGCTTTGCCATGGCGGGGAGCGTCCAGCCCGCCGGTAAACGAGTAG GGATAGATGCCCGAAACATCTTGTCTACATCCCTTTCAAGTTGGTGGCTT GCCTTGGACGAAGTATATCTGTGCGCATCCCGGTGGACCCGGCGATAATG GCAGGCCTAACAACGCGACAACTATGCGATAATCTATGCAGCGAAAATTG TACTACCAAGCAGTTCAGCGTACCGGTAATTGGTTTTCGACAAAATGGGG AAATAGGGGGGGGGGGGTAATATATAGATAATTTTATACTGCATATTTTT GGCGCGGAAACATGTACAAACGAGCCAATCGGTGTAGGCAAATCGTTTGT GTGGAGTTTTACCCAGGTAGCTCGCGTGGTGTCTCGAGTCTCGCTGAAGC AACTTAGGCAGTAATTCCCTGCGTGGCGCTGACGGTATGACGATGTTCAA ATCTCTCCCTGCCCCCCCTCCCCCCCCTTCCGCACTACCACATTCGTCGA ACGACAGACTACATGGCAACTAAGCCCGACCCGATAGTGGAGTTCTCGAC CCCGATCCTTACCCACATGAACGACGACCACTCCGGCACCACCAAGACCA TGGTGCAACACTACATCACTGGCGGAACCGAGGTATGTGTTTGTGTGTGT GTGTTTGGGAGGGGGGGGGAGCATCGTCATACGTATGGAGAAAGATCGCT CAGCGCGTGCATCACCAAGTTGGCCGTCTTCTGTAACACCGGTCGCCGCG GTTTCCCTCTCCTCGGCGTGCCGCTAGCACCTTGTCGAAAGCGCCGCGTC ATGAGGCGTGCGTAGAGCGTCTGGCTTGGGTAATGTCTCTGGAGTCCGGA ATTATCGTCACCAGACCACGAATTATCCATATCAGGTCTGGAATTATTCC TCTATAGACCAGTCAGCGCGGTCTGGTTGACGGTGTGGGTGATTGATTTT CGTTTTGCACACGCCCAAGCGCCTGGAATTATCGCGGTGTCTTCCTTATT CCTCCTCCTTTTGCCTATACATCTCCGTTTGTGGAAAATTGCGCGCTTGT ACAGGTGGCCTCCGCCCAGATCACTGCCGTTGACAGGCTGGGCATGTACG TGCTCGTTGGAATGGGCGACGGGCAATCGGGGAAGCTCAGGCTGCCGTTC TCGCGTCCGGCGGAAAGCCGTGGCGATGTCAAGACTTTAATCGTCGAGAT GACCAACGAGGCCATGTCGACCGCGGGAAATTGA
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Coding sequence (CDS) from alignment at H-elongata_contig61511:210..3143-

>mRNA_H-elongata_contig61511.13706.1 ID=mRNA_H-elongata_contig61511.13706.1|Name=mRNA_H-elongata_contig61511.13706.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1308bp|location=Sequence derived from alignment at H-elongata_contig61511:210..3143- (Himanthalia elongata Himel1 dioecious)
TACCCGAGCGGTTCAGTTGTGGGGTTCGCGCTCGACGATCAGGGGCGGCC
CATGTTCGCCTTCAGCTCGATGAGCTCGCACACCCGCGACTTACTGTCGG
ACTCTCGCGTCAGCCTCACCGTCACGGCTGCCAACTTCAAGTACCCGAGC
GGTTCAGTTGTGGGGTTCGCGCTCGACGATCAGGGGCGGCCCATGTTCGC
CTTCAGCTCGATGAGCTCGCACACCCGCGACTTACTGTCGGACTCTCGCG
TCAGCCTCACCGTCACGGCTGCCAACTTCAAGGGGGCAGCTGACGGCCGA
GTGAGCATAATCGGAGACGTGAACAAGGGGGCAGCTGACGGCCGAGTGAG
CATAATCGGAGACGTGAACAAGGTCCCCGACGAGGATCTGGCCAGCGTTC
GCGAGATGTACAAGGCGAAGCACCCGAAGGCGTACTGGATCGACTTCGGC
GACTTCTCGCTCATGCGCATGGACACGATCAAGGCTATGCGCTTCGTCGG
GGGCTTTGCCATGGCGGGGAGCGTCCAGCCCGCCGGTCCCCGACGAGGAT
CTGGCCAGCGTTCGCGAGATGTACAAGGCGAAGCACCCGAAGGCGTACTG
GATCGACTTCGGCGACTTCTCGCTCATGCGCATGGACACGATCAAGGCTA
TGCGCTTCGTCGGGGGCTTTGCCATGGCGGGGAGCGTCCAGCCCGCCGAC
TACATGGCAACTAAGCCCGACCCGATAGTGGAGTTCTCGACCCCGATCCT
TACCCACATGAACGACGACCACTCCGGCACCACCAAGACCATGGTGCAAC
ACTACATCACTGGCGGAACCGAGACTACATGGCAACTAAGCCCGACCCGA
TAGTGGAGTTCTCGACCCCGATCCTTACCCACATGAACGACGACCACTCC
GGCACCACCAAGACCATGGTGCAACACTACATCACTGGCGGAACCGAGGT
GGCCTCCGCCCAGATCACTGCCGTTGACAGGCTGGGCATGTACGTGCTCG
TTGGAATGGGCGACGGGCAATCGGGGAAGCTCAGGCTGCCGTTCTCGCGT
CCGGCGGAAAGCCGTGGCGATGTCAAGACTTTAATCGTCGAGATGACCAA
CGAGGCCATGTCGACCGCGGGAAATTGAGTGGCCTCCGCCCAGATCACTG
CCGTTGACAGGCTGGGCATGTACGTGCTCGTTGGAATGGGCGACGGGCAA
TCGGGGAAGCTCAGGCTGCCGTTCTCGCGTCCGGCGGAAAGCCGTGGCGA
TGTCAAGACTTTAATCGTCGAGATGACCAACGAGGCCATGTCGACCGCGG
GAAATTGA
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