mRNA_H-elongata_contig6108.13656.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig6108.13656.1
Unique NamemRNA_H-elongata_contig6108.13656.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: D8LC96_ECTSI (Peroxisomal membrane protein PEX16 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC96_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 1.350e-144
Identity = 263/506 (51.98%), Postives = 330/506 (65.22%), Query Frame = 2
Query:   74 EHQHSQHVAGDGWSYAKFVRRNPIGARSLESLLQYAGFFAPTRWADRDLAIESGYAAASLASLMHSLILLNDRLGDGLGPDGPD------------QIHSQSGTPGSTI--EHCSKPRTSSSTTFAERMRVILAMITNVQVVLEKLSRQHGGERRRRQAIIYVEALKAVSRLLLLAFTGEMMLAGGVYVPG-KPRSPQCRDRAKRATCREVNLAERSTNAQHFLE--ADSLPST-LRSPEIYTGRRSGVRFVIPPRASFVWRGRGRSSR-GCVGRQAISGEA---SYSQRKPKGPCTACQTSSDSFTELHETEQESWTPETNGRVDGGDTCYEENPQQRQTRLSSRYDGGGKSEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGG--GKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            + Q     + +GW YA FVR NP  AR++E+LL+Y+GFFAP R+ADRDL+IESGYA +SLA+L H  IL++ + G GLG  G D            Q+H+    PGS+I  +  ++ R SS+T  A+RMRV LAMI NVQ+V+EKL+ QHGG RRR+QAI+Y+E LKA++RLLLLA T EM++ GG YV G   R+P   +R K    REV+L     N     E   D  PS     PE+YTG+RSGV+ ++PPRAS VW GRGRS+R G V R A +  +     S+R   G      +SS SF                G  +GG         +  +  S  +    +++ G  QAWLMAGEV HILRPL YSY C +TGERSWRPWL+SLGMD  A+ACTARAGG  G +A L P+       GVP+LP+LD E+AAEL+RRK+LWFLYLMRSPAF+LL EP+SRGAAGVFEGVP+LGGM  YA+NMLLYVQRHHFY SAS
Sbjct:    3 QQQRDPRASEEGWCYANFVRHNPTAARTVETLLRYSGFFAPARFADRDLSIESGYALSSLAALAHDQILIHGQ-GGGLGRGGQDGGAANDDGLDGGQVHALGIAPGSSIRLDPKNRERPSSTTVVAQRMRVALAMIANVQIVVEKLAAQHGGPRRRQQAIVYLETLKALARLLLLACTREMVVGGGSYVSGGNRRTPPLGNRNKAGAWREVDLNGARLNQAQSSEFAVDRPPSPPCPPPEVYTGKRSGVKLIVPPRASVVWSGRGRSNRSGGVSRLAATASSPSCGSSRRSADGVFQNDSSSSSSFR---------------GCANGGQGIGTGGSMEAASDESCVWRQRREAQGG--QAWLMAGEVIHILRPLAYSYGCAATGERSWRPWLISLGMDAAAFACTARAGGSSGAMALLTPIGE-AGSSGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A835Z8Q5_9STRA (Peroxisomal membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q5_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.740e-59
Identity = 162/470 (34.47%), Postives = 226/470 (48.09%), Query Frame = 2
Query:  116 YAKFVRRNPIGARSLESLLQYAGFFAPTRWADRDLAIESGYAAASLASLMHSLILLNDRLGDGLGPDGPDQIHSQSGTPGSTIEHCSKPRTSSSTTFAERMRVILAMITNVQVVLEKLSRQHGGERRRRQAIIYVEALKAVSRLLLLAFTGEMMLAGGVYVPGKP--RSPQCRDRAKRATCREVNLA--ERSTNAQHFLEADSLPSTLRSPEIYTGRRSGVRFVIPPRAS----------FVWRGRGRSSRGCVGRQAISGEASYSQRKPKGPCTACQTSSDSFTELHETEQESWTPETNGRVDGGDTCYEENPQQRQTRLSSRYDGGGKSEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLL 1483
            Y+ FV+ NP  A  LES+L+Y+GF AP ++ +R+L +E+GYAA+SLA L+H          DG+  + P Q H Q  T G                    +R  L ++ +++VV EK++   GG  RRRQ I  +E  KAV RL +LA T EM+LAGG + PG P  R      R        V L   +R+ N               +P +Y G+R G ++ +P RA               G   +  GC   Q      S++       C   Q ++                   G  DG     EE+      R       G    P   +AWL+ GE  H +RP  YS +CG  GE +W PWL+S+ +DV + ACTARA        + VR G  G G  + P    E+ AEL+RRK+ W LYL+R+PAF+LL+ P + GAAG F GVP+LGG+ +YA+ MLL
Sbjct:   10 YSAFVKANPGTANLLESVLRYSGFLAPAQFGERELLVEAGYAASSLAGLLH----------DGI--NAPQQQHQQRSTGGHEEG------------VVATLRTALVVLAHIEVVAEKVAAASGGAVRRRQLITAIEVAKAVMRLTILALTREMLLAGGHHAPGAPPLRGQTIAGRVGSRVLSTVGLGLEDRAENGTGH-------GPPPAPVMYQGKRCGRKYALPARAQARHGSAPGLRLGANGSAPALNGCSSAQ----NGSHTDMYGAASCCGLQHAACG----------------GGHGDGAGWMAEEDEDGELERHRRWLHAGRAPAPPPPKAWLLLGEGLHAIRPAAYSAACGRLGEAAWAPWLLSMSVDVASRACTARA--------VEVRGG-RGNGGALTP----EQRAELRRRKVQWVLYLLRTPAFELLLGPAATGAAGAFGGVPVLGGLASYALQMLL 415          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A7S2SSB6_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSB6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.900e-25
Identity = 127/468 (27.14%), Postives = 195/468 (41.67%), Query Frame = 2
Query:  113 SYAKFVRRNPIGARSLESLLQYAGFFAPTRWADRDLAIESGYAAASLASLMHSLILLNDRLGDGLGPDGPDQIHSQSGTPGSTIEHCSKPRTSSSTTFAERMRVILAMITNVQVVLEKLSRQHGGERRRRQAIIYVEALKAVSRLLLLAFTGEMMLAGGVYVPGKPRSPQCRDRAKRATCREVNLAERSTNAQHFLEA-DSLPSTLRSPEIYTGRRSGVRFVIPPRASFVWRGRGRSSRGCVGRQAISGEASYSQRKPKGPCTACQTSSDSFTELHETEQESWTPETNGRVDGGDTCYEEN--PQQRQTRLSSRYDGGGKSEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFY 1507
            SYA FVRR     + LE+ +  A ++ P+R++  +   E GYA ++L  L+H  IL                  S S +P   ++ CS     +S        + LA+ +N+QV+LE+LSR+  GE  R+  II +E LK + RL+L+     +++ GG Y+P     P  +  A  AT  E         A     A D L +T+R   +Y GRR G    +   A            G     + +G+   +        T    S DS       + E   P   G + G D   E    P     R +   +          + W+MA E  +  RPLV          R WR  +V+L +D+ +  C  RA          +R G           L  E   E +RRKL++  YL+R+P +  L  P++      F  +P+ GG+  Y  + + Y+QRHHFY
Sbjct:   16 SYAAFVRRREPWVKMLETAIANASYYFPSRFSSTEELSELGYAVSNLLGLVHDTILA-----------------SPSASP-LELQGCS-----ASEQITLGAEIALAVTSNIQVLLEQLSRRVQGEEGRQTIIIRIETLKFLLRLVLIFRRQTLLVDGGNYMPPLRAGPN-QTAALDATSSEAXXXXXEERAAAEANAVDDLLTTVRQRHVYVGRRCGKSMHLGDVA------------GAQCEMSTAGDNGLA-------ATPVWLSEDS-------DGEDTLP---GTISGRDGQAEAPIVPPHAPHRTNEEAE-------SLRRRWIMASEALYFSRPLV-QVLLTYRARRRWRALVVALLIDILSLWCWFRAE--------KLRRGA----------LSLEVCEERRRRKLMYAYYLLRAPLWDSLSRPVADTVHSSFASIPVAGGIANYLYSFVDYLQRHHFY 404          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A1W0AC00_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC00_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.740e-16
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 2
Query: 1094 MAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAV-NMLLYVQRHHFYISAS 1519
            +AGEV HILRP++Y+  C    E+SW P+L S   ++   AC++   G + ++ L V               D   A EL+RRK+   LYL+R+P F    +PL+   A   + VPLLG ++ +A+ N L Y QR HFY SAS
Sbjct:  192 LAGEVLHILRPVIYAILCQRKTEQSWIPFLASFSTEILGIACSSA--GLEHSNKLSV---------------DPLVAEELRRRKMCLLLYLLRNPFFSSATQPLADNVANATKPVPLLGRLLQFAIDNGLHYYQRRHFYTSAS 317          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: W7TST8_9STRA (Peroxisomal membrane protein PEX16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST8_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.970e-16
Identity = 133/538 (24.72%), Postives = 208/538 (38.66%), Query Frame = 2
Query:  113 SYAKFVRRNPIGARSLESLLQYAGFFAPTRWADR---DLAIESGYAAASLASLMHSLILLNDRLGDGLGPDGPDQIHSQSGTPGSTIEHCSKPRTSSSTTFAERMRVILAMITNVQVVLEKLSRQHGGERRRRQAIIYVEALKAVSRLLLLAFTGE-------MMLAGGVYVPGKPRSPQCRDRAKRATCREVNLAERSTNAQHFLEADS---------LPSTLRSP---------EIYTGRRSGVRFVIPPRASFVWRGRGRSSRGCVGRQAISGEASY-SQRKPKGPCTACQ----------TSSDSFTELHETEQES--WTPETNGRVDGGDTCYEENPQQRQTRLSSRYDGGGKSEPGFSQAWLMAGEVSHILRPLVY-------------------------SYSCGSTGERSWRPWLVSLG--MDVFAYACTARA-GGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            SY  FVR + +  R LE L++   FF P+R+ +    ++  E   AA+++ +L++ L+LL  R                  TP    E              +R+ + L +I++ +V+ EK+S    G+      ++++EALK + RL L++   +       ++L GG  +P   R  +    +        +L  +++ A   +E D          LP  +  P         E   GRR+G +F       F               ++ +G+  Y S R   G  T C           +S+ S TE   +   S   T +  G   G +   EE P+  Q R                   L+AGE+ HILRPLV                          S   G     +    LV L   MD+ +Y CT  A  GG  A                   L      EL+RRK LW LYL+R+P F+ L  P++R   G    +PL+GG+ +Y+   L+Y+QRH    S S
Sbjct:    6 SYISFVRNHALFVRPLEGLIRTVTFFLPSRFYENGNGEIVSEGALAASNVMTLVNDLVLLGPR-----------------NTPLLPKEE-------------DRLGLTLLLISHTEVLAEKIS-MRLGDGTDHLVVLWLEALKVLLRLRLVSLQQQHGGNANVVLLDGGRAIPTFHRPVESARPSSSTPGETSSLGVKNSGATSGVEEDQEDEEVLLRVLPEEVARPKRAECREGQEWKRGRRTGRKFRY-----FS--------------ESYNGDDDYGSNRHLIGDLTRCNARWTLSSPSPSSASSSTESGASTSPSAPTTGDCEGVAVGIEWTREERPEVAQARARL----------------LLAGEILHILRPLVLASLRWALARRRRVKGRAVAAPPMGRSLRRGPLHSAAPESLLVLLPALMDLVSYQCTTGALNGGDNA-------------------LKQSCEDELRRRKNLWLLYLLRTPVFEGLTHPVTRAVDGSLVRLPLVGGLASYSYQALIYIQRHFTLTSGS 458          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A4D8XZS9_SALSN (Peroxisomal membrane protein PEX16 n=7 Tax=Salvia TaxID=21880 RepID=A0A4D8XZS9_SALSN)

HSP 1 Score: 87.0 bits (214), Expect = 1.640e-14
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 2
Query: 1064 SEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPV-RSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            SE G      + GEV +ILRPL+Y       G RSW PWL SLG+D+         G G ++ +  +  + +D +       L + E  ELKRRKLLW LYLMR P F         GA  + E +P++G +    + +L+  Q  + Y+S S
Sbjct:  234 SEKGMPGGLFLTGEVMYILRPLIYVLLVRKYGARSWFPWLTSLGVDL--------VGSGVISFVTTLWHNSIDFR-------LSNNEKNELKRRKLLWALYLMRDPFFTKHTRQRLDGAQKLLEPIPIVGLLSEKVIELLVGAQTRYTYMSGS 371          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: UPI00077282A9 (peroxisome biogenesis protein 16 isoform X2 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI00077282A9)

HSP 1 Score: 84.0 bits (206), Expect = 2.060e-14
Identity = 56/152 (36.84%), Postives = 71/152 (46.71%), Query Frame = 2
Query: 1064 SEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            SE GF  A  + GEV  I RPL+Y       G RSW PW +SL +D        +            +S  DG+G   L   DSE+  ELKRRKLLW LYLMR P F             V E VP++G +    V ++   Q  + Y+S S
Sbjct:   91 SERGFHGALFVMGEVLFITRPLIYVLFIRKYGIRSWIPWFLSLAVDFIGIGLLTQV----------TKSRHDGKGQQ-LSLTDSEKD-ELKRRKLLWALYLMRDPFFNKYTRQRLESTEKVLEPVPIIGLITAKIVELVTGAQTRYTYMSGS 230          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A2P2KGJ9_RHIMU (Peroxisomal membrane protein PEX16 n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2KGJ9_RHIMU)

HSP 1 Score: 86.3 bits (212), Expect = 2.890e-14
Identity = 57/152 (37.50%), Postives = 71/152 (46.71%), Query Frame = 2
Query: 1064 SEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            SE G   A  + GE   I RPL+Y       G RSW PW +SLG+D          G G +A L+  R G  GQ       L   E  ELKRRKLLW LYLMR P F             + E VP++G +    V +L+  Q  + Y+S S
Sbjct:  230 SEKGIHGALFVMGEFLFITRPLIYVLFIRRYGIRSWIPWFLSLGVDFI--------GTGILAQLIKSRYGGKGQKF----HLTVSEQDELKRRKLLWALYLMRDPFFSKYTRKRLESTQKLLEPVPIVGFLTEKIVELLIGAQSRYTYMSGS 369          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A6N2AK06_SOLCI (Peroxisomal membrane protein PEX16 (Fragment) n=7 Tax=Solanum TaxID=4107 RepID=A0A6N2AK06_SOLCI)

HSP 1 Score: 85.5 bits (210), Expect = 4.650e-14
Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 2
Query: 1064 SEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            S+ G    + + GE+  I+RPLVY       G RSW PW VSL +D+   +  +        +L+   SG + Q    L F DSE+  ELKRR++LW LYLMR P F             + + +P+LG +    + +L+ VQ  + YIS S
Sbjct:  220 SDKGVPGGFFVTGEILFIIRPLVYVLLMRKYGTRSWFPWCVSLAVDLIGNSILS-------VTLMSQHSGKNQQ----LQFSDSEKD-ELKRRRMLWALYLMRDPLFTKYTRQRLESTQRLVQPIPILGFVAEKIIEILIGVQTRYTYISGS 359          
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Match: A0A1R3I7X7_COCAP (Peroxisomal membrane protein PEX16 n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I7X7_COCAP)

HSP 1 Score: 85.1 bits (209), Expect = 5.690e-14
Identity = 54/152 (35.53%), Postives = 77/152 (50.66%), Query Frame = 2
Query: 1064 SEPGFSQAWLMAGEVSHILRPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRSGVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAAGVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS 1519
            SE GF+ A  + GEV  I RPL+Y       G RSW+PW +SL +D          G G ++ ++  +SG  G+       L + E  E+KRRKLLW LYLMR P F+            + E VPL+G +    V +++  Q  + Y+S S
Sbjct:  212 SEKGFNGALFVLGEVLFITRPLIYVLFIRRYGLRSWKPWFISLAVDFI--------GVGFISHVM--QSGKGGREQRFN--LSASEKDEVKRRKLLWALYLMREPFFEKYTRRKLESTEKILEPVPLIGTLAGKIVELVVGAQSRYTYMSGS 351          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6108.13656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC96_ECTSI1.350e-14451.98Peroxisomal membrane protein PEX16 n=2 Tax=Ectocar... [more]
A0A835Z8Q5_9STRA1.740e-5934.47Peroxisomal membrane protein-domain-containing pro... [more]
A0A7S2SSB6_9STRA1.900e-2527.14Peroxisomal membrane protein PEX16 n=1 Tax=Rhizoch... [more]
A0A1W0AC00_9STRA1.740e-1638.46Peroxisomal membrane protein PEX16 n=1 Tax=Thraust... [more]
W7TST8_9STRA1.970e-1624.72Peroxisomal membrane protein PEX16 n=2 Tax=Monodop... [more]
A0A4D8XZS9_SALSN1.640e-1435.29Peroxisomal membrane protein PEX16 n=7 Tax=Salvia ... [more]
UPI00077282A92.060e-1436.84peroxisome biogenesis protein 16 isoform X2 n=1 Ta... [more]
A0A2P2KGJ9_RHIMU2.890e-1437.50Peroxisomal membrane protein PEX16 n=4 Tax=Rhizoph... [more]
A0A6N2AK06_SOLCI4.650e-1434.87Peroxisomal membrane protein PEX16 (Fragment) n=7 ... [more]
A0A1R3I7X7_COCAP5.690e-1435.53Peroxisomal membrane protein PEX16 n=1 Tax=Corchor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6108contigH-elongata_contig6108:6348..10204 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score451.8
Seed ortholog evalue4e-124
Seed eggNOG ortholog2880.D8LC96
Preferred namePEX16
KEGG koko:K13335
KEGG TC3.A.20.1,9.A.17.1
KEGG Pathwayko04146,map04146
GOsGO:0000003,GO:0000038,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005783,GO:0005789,GO:0006082,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007276,GO:0007283,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016557,GO:0016558,GO:0017038,GO:0019752,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0022615,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0031984,GO:0032501,GO:0032504,GO:0032581,GO:0032787,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042579,GO:0042760,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045046,GO:0045184,GO:0046394,GO:0046395,GO:0046907,GO:0048137,GO:0048232,GO:0048609,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072330,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0098588,GO:0098805,GO:0098827,GO:0106101,GO:1901575,GO:1901576
EggNOG free text desc.ER-dependent peroxisome localization
EggNOG OGsKOG4546@1,KOG4546@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeroxisome membrane protein, Pex16
Ec32 orthologEc-14_005580.1
Exons4
Model size2562
Cds size1452
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6108.13656.1prot_H-elongata_contig6108.13656.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig6108 7388..10134 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930985.9313798-UTR-H-elongata_contig6108:6347..73871622930985.9313798-UTR-H-elongata_contig6108:6347..7387Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6108 6348..7387 -
1691679651.413439-UTR-H-elongata_contig6108:6347..73871691679651.413439-UTR-H-elongata_contig6108:6347..7387Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6108 6348..7387 -
1622930986.0173922-UTR-H-elongata_contig6108:10134..102041622930986.0173922-UTR-H-elongata_contig6108:10134..10204Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6108 10135..10204 -
1691679651.4735236-UTR-H-elongata_contig6108:10134..102041691679651.4735236-UTR-H-elongata_contig6108:10134..10204Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig6108 10135..10204 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930985.9478855-CDS-H-elongata_contig6108:7387..83171622930985.9478855-CDS-H-elongata_contig6108:7387..8317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 7388..8317 -
1691679651.424106-CDS-H-elongata_contig6108:7387..83171691679651.424106-CDS-H-elongata_contig6108:7387..8317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 7388..8317 -
1622930985.9670413-CDS-H-elongata_contig6108:9065..92731622930985.9670413-CDS-H-elongata_contig6108:9065..9273Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 9066..9273 -
1691679651.4327412-CDS-H-elongata_contig6108:9065..92731691679651.4327412-CDS-H-elongata_contig6108:9065..9273Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 9066..9273 -
1622930985.9831176-CDS-H-elongata_contig6108:9577..97651622930985.9831176-CDS-H-elongata_contig6108:9577..9765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 9578..9765 -
1691679651.4516594-CDS-H-elongata_contig6108:9577..97651691679651.4516594-CDS-H-elongata_contig6108:9577..9765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 9578..9765 -
1622930986.0022566-CDS-H-elongata_contig6108:10008..101341622930986.0022566-CDS-H-elongata_contig6108:10008..10134Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 10009..10134 -
1691679651.4634001-CDS-H-elongata_contig6108:10008..101341691679651.4634001-CDS-H-elongata_contig6108:10008..10134Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig6108 10009..10134 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig6108.13656.1

>prot_H-elongata_contig6108.13656.1 ID=prot_H-elongata_contig6108.13656.1|Name=mRNA_H-elongata_contig6108.13656.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=484bp
MEHQHSQHVAGDGWSYAKFVRRNPIGARSLESLLQYAGFFAPTRWADRDL
AIESGYAAASLASLMHSLILLNDRLGDGLGPDGPDQIHSQSGTPGSTIEH
CSKPRTSSSTTFAERMRVILAMITNVQVVLEKLSRQHGGERRRRQAIIYV
EALKAVSRLLLLAFTGEMMLAGGVYVPGKPRSPQCRDRAKRATCREVNLA
ERSTNAQHFLEADSLPSTLRSPEIYTGRRSGVRFVIPPRASFVWRGRGRS
SRGCVGRQAISGEASYSQRKPKGPCTACQTSSDSFTELHETEQESWTPET
NGRVDGGDTCYEENPQQRQTRLSSRYDGGGKSEPGFSQAWLMAGEVSHIL
RPLVYSYSCGSTGERSWRPWLVSLGMDVFAYACTARAGGGKVASLLPVRS
GVDGQGVPILPFLDSEEAAELKRRKLLWFLYLMRSPAFQLLVEPLSRGAA
GVFEGVPLLGGMVTYAVNMLLYVQRHHFYISAS*
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mRNA from alignment at H-elongata_contig6108:6348..10204-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig6108.13656.1 ID=mRNA_H-elongata_contig6108.13656.1|Name=mRNA_H-elongata_contig6108.13656.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3857bp|location=Sequence derived from alignment at H-elongata_contig6108:6348..10204- (Himanthalia elongata Himel1 dioecious)
GTATGATTGCAGTCCGACTGAGCAAGCCTTTTGCTGGTATCGTTCTTCCA CAGGATATTAATTGGCCACGATGGAGCATCAACACAGCCAGCATGTTGCG GGAGATGGATGGTCCTACGCTAAATTTGTCCGGCGCAATCCAATTGGAGC ACGATCTCTAGAGAGTCTCCTTCAATATGCTGGCTTCTTCGCACCGGTGA GATGCTCACCACAACTCATTTGTGAAATATTGTGAAATATTGCAGCCTGG CGGCTTATATTCGTTATTCTGATCGTTGGCGTGCTTAGCTTTCGTGGGAG TAGATTCAATGACATTCCGTCGAAGGTAGTTTTTCGCTTTTCGTAGAGGC AGGCCCAAGGGGGGCATCAAAGAATCGGTGTATCATTAAACCATGAACAC CATCCTCTGTACTCTTTAACCTGCTCCTATCTCATCCAGACTCGTTGGGC CGACCGAGATCTGGCTATTGAATCGGGTTACGCTGCGGCGAGTCTTGCCT CCCTGATGCACAGCCTTATCTTACTAAATGACCGCCTCGGTGATGGATTG GGCCCGGACGGCCCGGATCAAATCCATTCACAGAGTGGCACACCTGGATC GACCATCGAACATTGCTCCAAGCCCAGGTAATCTCGCCCTTGAAAATGTG TTGCCGAGCTACCATGTTACTATTATCAATGGATGACGGGCATCGTTGTA GCCGCCACTCATATATAATCTAAACCTAAGCATCGTCGCTTCAAGTCGTG GACCAACTGGTTACAGCACAATCATTTGCATGTTAGTTGATAAATGAATC TACAGGCTAGGAAAATTCACAAAATGCCATCTTGCTTGGTACGAAACTTC CGATAAGCTATATTGGTAGGCCACTCGATATATATCTCTAAGTTCCTCGT GTCTTGCGCCTTTCTTGTCTGTGTGCAACAGAACTTCTTCTTCAACTACG TTCGCCGAGCGGATGCGTGTCATCCTCGCCATGATCACCAACGTGCAGGT CGTGTTGGAGAAGTTGTCGAGGCAGCATGGGGGGGAACGAAGAAGGCGAC AAGCGATCATCTATGTCGAGGCGCTCAAGGCTGTAAGCCGACTCCTGCTA CTTGCATTCACGGGAGAAATGATGCTCGCCGGTGGTGTGGTAAGTGATGT ACTGACTGTAGCCTTTTAGGCCTTCCATCTGTTTCTATTCAACCGTCATG CCCACTCTACCCATAGTGGGTGTGGGAAAATAGAGGCGTACATTGATTGG TCAATGGGGTTACCTGAGTATACTGCACCCGTTACTCAAGCTACCTTGAG GACTATTGGCTCAGTGCCGGCGGACTCTCGGTAGTAAATGCCATCGGTAC GCCATTGCGTGGCCTGATGAAATCAGGATTGACCCAATGGCGGTTGACGG TAGAGATGGACGGCGTCGCGGAAGACGGGAGGATTCAGAGGATCCCAGGA GTAAGCACCAGATTCAGCCTGAGTTGAGAGAATGAGCGGGCTGACGCGGG ACGGGACGGCGGAACCCATCTCGCGAGACTAAAATCTGAGGCGTGAACGG GGACAGGGAAAATTATTTTCCCTGTTCAGCTGACCACGAGCAGAATGAAA CCAAATCCGGTTGATACATACATACATACTACATAGTCCATTGGATTTAT CAGATATTGAAAGGGTAACATGACTTGCATCCGTTCACTTGAGACTTACA TTCGAAATAGTGGAAGTGTCTCCTATCTTAGATTCGTCTTGATGACCGCC AAATTTGCAACCCTTGAGGTATGCTCTTGTTGCATACTACACCTCTCCCT TTCTCATGCCTTCGGCAAAATAATCACAGCTTTACGTCCACCTCTCTGTC TGAACGATCGTGAAATTCATTTCCGATGTCAACACAGTACGTGCCTGGAA AACCAAGATCCCCTCAATGCCGAGACCGGGCAAAGCGAGCAACTTGTAGA GAAGTCAACTTAGCCGAGCGCAGCACGAATGCGCAACACTTCCTCGAGGC GGATTCTCTCCCTTCCACCTTACGTTCTCCAGAGATCTACACGGGCAGGC GCAGCGGCGTGCGATTTGTAATCCCGCCACGAGCGAGTTTCGTGTGGAGG GGACGAGGGCGCTCGAGTCGGGGTTGTGTCGGCAGGCAGGCGATCTCGGG CGAAGCTTCGTATTCCCAACGGAAGCCGAAAGGACCTTGCACGGCGTGCC AGACGAGCAGTGATAGTTTTACGGAACTTCATGAAACCGAGCAGGAGAGT TGGACGCCAGAGACCAATGGAAGAGTCGATGGAGGGGACACCTGCTACGA GGAAAACCCTCAACAACGACAGACGCGGCTTTCGTCAAGATATGACGGCG GTGGCAAAAGCGAACCAGGGTTCTCGCAAGCTTGGCTAATGGCGGGCGAG GTTTCGCATATACTGCGACCGCTGGTGTACAGCTACAGCTGCGGGTCCAC GGGAGAGCGATCGTGGCGTCCTTGGCTTGTTTCCCTGGGGATGGACGTTT TCGCATACGCTTGCACCGCTCGAGCAGGCGGCGGCAAGGTTGCATCACTT CTACCCGTCAGATCTGGTGTTGATGGGCAAGGTGTTCCGATATTGCCATT CTTGGACAGCGAGGAAGCAGCTGAGCTGAAGCGACGAAAGTTATTGTGGT TCTTGTACTTGATGCGCTCCCCCGCGTTCCAGTTGCTGGTGGAGCCGCTC AGCAGAGGTGCCGCAGGCGTCTTCGAGGGAGTGCCGCTCTTGGGTGGCAT GGTGACCTACGCGGTCAACATGCTGCTCTATGTGCAAAGGCACCACTTCT ACATATCAGCGTCTTAATCAGCGTTCACGAGGAAGCCAGGTCATGCACCG ATGATTTATATCGTTATTTAAGTTCCATGAGTAATCATACCCTTGCCCCG ATTATCGCCCAAGTTGATGATTTTCTCTCTCAAGAAGCTATCATCCTTGA AAGCGTGTTGGAATCCGGTGGAGTGTAAGTTGAAGTTATATCTGATAAGA ACCCAGTGGGTTGCATTTTTCTGGTCTCAATGTCGTTCGCCGCAGGGCGA CTTCGCGGTTTATCTACGTTCATGTTGAAACCCTTGCGTACCACGAACCC GCGTGTCAACAGCAACCTGCATTCAAGCATGAACGTACAGTGGATCGTTG CTGCAGAAGCTGCGCAGAACGTGTCGGGGAACACGAAGCCGCAGAAAAAT ACCCACCATGTTTTCGAAACGAGGTGTTTAACTCTTAAATCTCATGTTCA TATATTATTTATCTTGACAGTAGAGACCACGCTTGTTTGTTAGGTTAGGT TTTGCTTTGTTTGTCATCGCTACGTTGTGTGCAGCAGGTAGGGGAATTGG ACGAAACTTTGGCCGGTGGCGTATGATGACATGCAAAAAAATATTGAGAG AAATGGCGTGTAGTCTGAGCGTCAGCAAGCCGGTGTCACCTAACAAGCGA CTTCCAGGGATTCTTCGAAATCCGTCCAATGAGGCCATCGAAAACTTTGT AGAGGCGGGACTAGAGGAGGACGAGGGTTAGCATATACATTTTCAATACT AAGTATTGGGCTGCAGAGAAGTCGAACCGGTGTATGGACATAATTTGACA AAGCTTAATCGGAAACTGATCAGTATGTTGAAGAGTCGAGTGATAACCTT TTCACTTTTCACCGAAGGCGTTTTAAGCAAAACGCAATAATAGCGGAAGA TCTCCCTTTTGGAACTAGATTTCAAGTTTTATTATACATTTAGTATGTAA AAAACAGATCGAGTTCCCTAGGGTTAAGTTACCCAGCAAAAACTGGTACT CGCTGCATACCTCATGGATTATGTGTAAGCGATACTATTTTAATGCGTAT TAATCAC
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Coding sequence (CDS) from alignment at H-elongata_contig6108:6348..10204-

>mRNA_H-elongata_contig6108.13656.1 ID=mRNA_H-elongata_contig6108.13656.1|Name=mRNA_H-elongata_contig6108.13656.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2904bp|location=Sequence derived from alignment at H-elongata_contig6108:6348..10204- (Himanthalia elongata Himel1 dioecious)
ATGGAGCATCAACACAGCCAGCATGTTGCGGGAGATGGATGGTCCTACGC
TAAATTTGTCCGGCGCAATCCAATTGGAGCACGATCTCTAGAGAGTCTCC
TTCAATATGCTGGCTTCTTCGCACCGATGGAGCATCAACACAGCCAGCAT
GTTGCGGGAGATGGATGGTCCTACGCTAAATTTGTCCGGCGCAATCCAAT
TGGAGCACGATCTCTAGAGAGTCTCCTTCAATATGCTGGCTTCTTCGCAC
CGACTCGTTGGGCCGACCGAGATCTGGCTATTGAATCGGGTTACGCTGCG
GCGAGTCTTGCCTCCCTGATGCACAGCCTTATCTTACTAAATGACCGCCT
CGGTGATGGATTGGGCCCGGACGGCCCGGATCAAATCCATTCACAGAGTG
GCACACCTGGATCGACCATCGAACATTGCTCCAAGCCCAGACTCGTTGGG
CCGACCGAGATCTGGCTATTGAATCGGGTTACGCTGCGGCGAGTCTTGCC
TCCCTGATGCACAGCCTTATCTTACTAAATGACCGCCTCGGTGATGGATT
GGGCCCGGACGGCCCGGATCAAATCCATTCACAGAGTGGCACACCTGGAT
CGACCATCGAACATTGCTCCAAGCCCAGAACTTCTTCTTCAACTACGTTC
GCCGAGCGGATGCGTGTCATCCTCGCCATGATCACCAACGTGCAGGTCGT
GTTGGAGAAGTTGTCGAGGCAGCATGGGGGGGAACGAAGAAGGCGACAAG
CGATCATCTATGTCGAGGCGCTCAAGGCTGTAAGCCGACTCCTGCTACTT
GCATTCACGGGAGAAATGATGCTCGCCGGTGGTGTGAACTTCTTCTTCAA
CTACGTTCGCCGAGCGGATGCGTGTCATCCTCGCCATGATCACCAACGTG
CAGGTCGTGTTGGAGAAGTTGTCGAGGCAGCATGGGGGGGAACGAAGAAG
GCGACAAGCGATCATCTATGTCGAGGCGCTCAAGGCTGTAAGCCGACTCC
TGCTACTTGCATTCACGGGAGAAATGATGCTCGCCGGTGGTGTGTACGTG
CCTGGAAAACCAAGATCCCCTCAATGCCGAGACCGGGCAAAGCGAGCAAC
TTGTAGAGAAGTCAACTTAGCCGAGCGCAGCACGAATGCGCAACACTTCC
TCGAGGCGGATTCTCTCCCTTCCACCTTACGTTCTCCAGAGATCTACACG
GGCAGGCGCAGCGGCGTGCGATTTGTAATCCCGCCACGAGCGAGTTTCGT
GTGGAGGGGACGAGGGCGCTCGAGTCGGGGTTGTGTCGGCAGGCAGGCGA
TCTCGGGCGAAGCTTCGTATTCCCAACGGAAGCCGAAAGGACCTTGCACG
GCGTGCCAGACGAGCAGTGATAGTTTTACGGAACTTCATGAAACCGAGCA
GGAGAGTTGGACGCCAGAGACCAATGGAAGAGTCGATGGAGGGGACACCT
GCTACGAGGAAAACCCTCAACAACGACAGACGCGGCTTTCGTCAAGATAT
GACGGCGGTGGCAAAAGCGAACCAGGGTTCTCGCAAGCTTGGCTAATGGC
GGGCGAGGTTTCGCATATACTGCGACCGCTGGTGTACAGCTACAGCTGCG
GGTCCACGGGAGAGCGATCGTGGCGTCCTTGGCTTGTTTCCCTGGGGATG
GACGTTTTCGCATACGCTTGCACCGCTCGAGCAGGCGGCGGCAAGGTTGC
ATCACTTCTACCCGTCAGATCTGGTGTTGATGGGCAAGGTGTTCCGATAT
TGCCATTCTTGGACAGCGAGGAAGCAGCTGAGCTGAAGCGACGAAAGTTA
TTGTGGTTCTTGTACTTGATGCGCTCCCCCGCGTTCCAGTTGCTGGTGGA
GCCGCTCAGCAGAGGTGCCGCAGGCGTCTTCGAGGGAGTGCCGCTCTTGG
GTGGCATGGTGACCTACGCGGTCAACATGCTGCTCTATGTGCAAAGGCAC
CACTTCTACATATCAGCGTCTTAATACGTGCCTGGAAAACCAAGATCCCC
TCAATGCCGAGACCGGGCAAAGCGAGCAACTTGTAGAGAAGTCAACTTAG
CCGAGCGCAGCACGAATGCGCAACACTTCCTCGAGGCGGATTCTCTCCCT
TCCACCTTACGTTCTCCAGAGATCTACACGGGCAGGCGCAGCGGCGTGCG
ATTTGTAATCCCGCCACGAGCGAGTTTCGTGTGGAGGGGACGAGGGCGCT
CGAGTCGGGGTTGTGTCGGCAGGCAGGCGATCTCGGGCGAAGCTTCGTAT
TCCCAACGGAAGCCGAAAGGACCTTGCACGGCGTGCCAGACGAGCAGTGA
TAGTTTTACGGAACTTCATGAAACCGAGCAGGAGAGTTGGACGCCAGAGA
CCAATGGAAGAGTCGATGGAGGGGACACCTGCTACGAGGAAAACCCTCAA
CAACGACAGACGCGGCTTTCGTCAAGATATGACGGCGGTGGCAAAAGCGA
ACCAGGGTTCTCGCAAGCTTGGCTAATGGCGGGCGAGGTTTCGCATATAC
TGCGACCGCTGGTGTACAGCTACAGCTGCGGGTCCACGGGAGAGCGATCG
TGGCGTCCTTGGCTTGTTTCCCTGGGGATGGACGTTTTCGCATACGCTTG
CACCGCTCGAGCAGGCGGCGGCAAGGTTGCATCACTTCTACCCGTCAGAT
CTGGTGTTGATGGGCAAGGTGTTCCGATATTGCCATTCTTGGACAGCGAG
GAAGCAGCTGAGCTGAAGCGACGAAAGTTATTGTGGTTCTTGTACTTGAT
GCGCTCCCCCGCGTTCCAGTTGCTGGTGGAGCCGCTCAGCAGAGGTGCCG
CAGGCGTCTTCGAGGGAGTGCCGCTCTTGGGTGGCATGGTGACCTACGCG
GTCAACATGCTGCTCTATGTGCAAAGGCACCACTTCTACATATCAGCGTC
TTAA
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