mRNA_H-elongata_contig6079.13616.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: D7G782_ECTSI (Globin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G782_ECTSI) HSP 1 Score: 203 bits (516), Expect = 1.390e-64 Identity = 98/144 (68.06%), Postives = 116/144 (80.56%), Query Frame = 1
Query: 1 SEAVKDVEAYKAEIRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAAKEVNP 432
+E DVE YKAEIRRTF LV+PIS +AA IFYPTLWE+D TK LF+DTDMDKQG KLMK LG+AV+ L+KMD L PIL NLG++HV YGVT MYPSV +ALL+TF+KGLG+ECT T +AW+WV +IS+ICI AA EV P
Sbjct: 11 AEGEVDVEGYKAEIRRTFALVEPISVQAAGIFYPTLWEVDTSTKPLFKDTDMDKQGEKLMKTLGVAVAMLNKMDTLKPILENLGRKHVDYGVTPEMYPSVGKALLITFEKGLGEECTPLTTKAWTWVFGIISSICIAAASEVKP 154
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: D7FYD1_ECTSI (GLOBIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD1_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.460e-56 Identity = 86/134 (64.18%), Postives = 110/134 (82.09%), Query Frame = 1
Query: 22 EAYKAEIRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAAKE 423
E+YKAE+RRT L+KPI EAA+IFYPTL+E+DP TK LF+D DM+KQGAKLMK++G+AV LDKMD+ P+L LGK+HV+YGVT MYPSV ALL+T +KGLG+EC TK+AW+WV+ I+A+CI AA+E
Sbjct: 10 ESYKAEVRRTHALLKPIQIEAAAIFYPTLFEVDPSTKPLFKDVDMEKQGAKLMKVIGVAVMMLDKMDQFKPMLVKLGKKHVTYGVTDDMYPSVVSALLITLEKGLGEECHQLTKDAWAWVMNSIAAVCIAAARE 143
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: A0A5C6AX78_9BACT (Flavohemoprotein n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6AX78_9BACT) HSP 1 Score: 129 bits (323), Expect = 1.580e-35 Identity = 65/132 (49.24%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 40 IRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAAKEVNPS 435
++ ++ VKPIS +AA +FY L+ELDP K LF+ DM +QG KLM +L LAV+SL K+D +VP +++LG+RHV YGV Y +V EALL T DKGLG+ T + KEAW+ +S + +DAA E P+
Sbjct: 9 VQSSWEQVKPISEQAAELFYGRLFELDPSLKPLFKG-DMKEQGKKLMAMLNLAVTSLTKLDAIVPAVQDLGRRHVQYGVPDESYQTVGEALLWTLDKGLGEAFTEDVKEAWTQTYVTLSTVMLDAAHESEPA 139
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: A0A1B4V7H3_9GAMM (Hemin receptor n=1 Tax=Sulfurifustis variabilis TaxID=1675686 RepID=A0A1B4V7H3_9GAMM) HSP 1 Score: 128 bits (321), Expect = 3.670e-35 Identity = 66/129 (51.16%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 31 KAEIRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAA 417
K ++ TF V PI+ +AA++FY L+ELDP K LFR DM +QGAKLM+++ +AV+ LD+M +LVP++++LG+RHV+YGVTAA Y +V ALL T +GLG T E +EAW V V++ IDAA
Sbjct: 6 KLLVQATFTQVAPIADQAAALFYRRLFELDPSLKALFRG-DMREQGAKLMRMIAMAVNGLDRMSELVPVVQDLGRRHVAYGVTAAHYETVGAALLWTLGQGLGPSFTPEVREAWGAVYGVLAQTMIDAA 133
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: UPI0016852984 (globin domain-containing protein n=1 Tax=Spongiibacter pelagi TaxID=2760804 RepID=UPI0016852984) HSP 1 Score: 123 bits (308), Expect = 2.620e-33 Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 1
Query: 31 KAEIRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAAKEVN 429
K ++ +F+ V+PI+ AA IFY L+ELDP K LF DM +QG KLM +LG AV +LD ++ LVP+++ LG+RHVSYGV AA Y +V +ALL T KGLG + T E KEAW V V+S+ I AA V
Sbjct: 6 KELVQSSFDKVEPIADVAAEIFYARLFELDPSLKPLFSG-DMAEQGKKLMTMLGTAVRALDNLEALVPVVQRLGERHVSYGVEAAHYATVGQALLDTLAKGLGDDFTPEVKEAWGVVYGVLSSTMIAAADAVK 137
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: A0A5M6CWU7_9BACT (Hemin receptor n=1 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6CWU7_9BACT) HSP 1 Score: 123 bits (308), Expect = 3.130e-33 Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 1
Query: 40 IRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAAKEVNPS 435
++ ++N VKPIS +AA +FY L+ELDP + LF+ DM +QG KLM L LAV SL K+D+++P ++ LG+RHV YGV Y +V EALL T +GLG+ T E KEAW+ +S + +DAA E P+
Sbjct: 9 VQSSWNQVKPISEQAAELFYGRLFELDPSLRPLFKG-DMKEQGKKLMATLNLAVMSLTKLDEILPAVQELGRRHVKYGVPDESYKTVGEALLWTLQQGLGEGFTDEVKEAWTITYVTLSNVMLDAAHEDQPA 139
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: A0A5C6FKM8_9PLAN (Bacterial hemoglobin n=2 Tax=Crateriforma conspicua TaxID=2527996 RepID=A0A5C6FKM8_9PLAN) HSP 1 Score: 122 bits (307), Expect = 3.830e-33 Identity = 62/128 (48.44%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 40 IRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTDMDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAAKE 423
++ ++ VKPIS +AA +FY L+ELDP K LF+ DM +QG KLM L LAV+SL K+D L+P L++LG+RHV YGV Y +V +ALL T ++GLG+ T++ KEAW+ +S + +DAA E
Sbjct: 9 VQSSWEQVKPISEQAAELFYGKLFELDPSLKPLFKG-DMKEQGKKLMATLSLAVASLTKLDSLLPALKDLGRRHVEYGVPDQSYQTVGQALLWTLEQGLGEAFTADVKEAWTETYVTLSTVMLDAAHE 135
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: A0A5C4SH89_9FLAO (Hemin receptor n=1 Tax=Tamlana fucoidanivorans TaxID=2583814 RepID=A0A5C4SH89_9FLAO) HSP 1 Score: 122 bits (305), Expect = 7.470e-33 Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 40 IRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTD--MDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAA 417
++ +F VKPI+ AA IFY L+ELDP K LF +++ M QG KLM +LG AV+ L+ +D L+P+L++LGKRHV Y V A Y +V EALL T + GLG + TSE KEAW+ V +S++ I+AA
Sbjct: 9 VQESFEKVKPIAPAAAEIFYSKLFELDPQLKPLFPNSEEAMKVQGNKLMSMLGAAVAGLNNLDALIPVLKDLGKRHVEYKVEAFHYDTVGEALLGTLEAGLGDDFTSEVKEAWASVYGTMSSVMIEAA 136
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: UPI00146AFC23 (globin domain-containing protein n=1 Tax=Flavivirga algicola TaxID=2729136 RepID=UPI00146AFC23) HSP 1 Score: 121 bits (303), Expect = 1.500e-32 Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 40 IRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTD--MDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAA 417
++ +F VKPI+ AA IFY L++LDP K LF ++D M +QG KLM +LG AV+ L +D L+PIL++LGKRHV Y V A Y +V EALL T + GLG + T + KEAW+ V +S + IDAA
Sbjct: 9 VQESFEKVKPIAPTAAKIFYEKLFDLDPQLKPLFPNSDDAMKEQGNKLMSMLGAAVAGLSNLDSLIPILKDLGKRHVEYKVEAFHYDTVGEALLGTLEVGLGDDFTPDVKEAWTTVYGTMSNVMIDAA 136
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Match: A0A4Q9FS97_9FLAO (Hemin receptor n=1 Tax=Hyunsoonleella pacifica TaxID=1080224 RepID=A0A4Q9FS97_9FLAO) HSP 1 Score: 120 bits (301), Expect = 3.010e-32 Identity = 65/128 (50.78%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 40 IRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTD--MDKQGAKLMKILGLAVSSLDKMDKLVPILRNLGKRHVSYGVTAAMYPSVSEALLLTFDKGLGQECTSETKEAWSWVLEVISAICIDAA 417
++ +F VKPI+ +AA IFY L+ELDP K LF +D M QG KLM +L AV+ L+ +D LVP+L+NLGKRHV Y V A+ Y +V ALL T + GLG E T E K AW+ V V+S + I+AA
Sbjct: 9 VQESFEKVKPIAPQAAEIFYAKLFELDPKLKPLFPSSDDAMKTQGNKLMSMLAAAVAGLNNLDALVPVLQNLGKRHVDYNVEASHYHTVGAALLGTLEAGLGDEFTPEVKTAWTDVYGVMSNVMIEAA 136 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6079.13616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig6079.13616.1 >prot_H-elongata_contig6079.13616.1 ID=prot_H-elongata_contig6079.13616.1|Name=mRNA_H-elongata_contig6079.13616.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp SEAVKDVEAYKAEIRRTFNLVKPISAEAASIFYPTLWELDPPTKELFRDTback to top mRNA from alignment at H-elongata_contig6079:8716..9422- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig6079.13616.1 ID=mRNA_H-elongata_contig6079.13616.1|Name=mRNA_H-elongata_contig6079.13616.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=707bp|location=Sequence derived from alignment at H-elongata_contig6079:8716..9422- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig6079:8716..9422- >mRNA_H-elongata_contig6079.13616.1 ID=mRNA_H-elongata_contig6079.13616.1|Name=mRNA_H-elongata_contig6079.13616.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at H-elongata_contig6079:8716..9422- (Himanthalia elongata Himel1 dioecious)back to top |