mRNA_H-elongata_contig60286.13569.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: D8LLX9_ECTSI (Cilia- and flagella-associated protein 36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX9_ECTSI) HSP 1 Score: 211 bits (538), Expect = 6.540e-63 Identity = 103/134 (76.87%), Postives = 117/134 (87.31%), Query Frame = 1
Query: 10 GPDEGVTDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQGLP 411
G +D +WLF+FLLS+ KSP WD +VMGFIDENCAVFDT+EENKLSYT+LHRQFKDLVETLC +SLAEVGV V DFVD LE SR SQDIS +VY+QL+ALDDFVTFKKLMVKRNVELELEAV AL++QG+P
Sbjct: 7 GGGRDASDTEWLFDFLLSVFKSPSWDLAVMGFIDENCAVFDTEEENKLSYTTLHRQFKDLVETLCANSLAEVGVAVGDFVDALEASRFSQDISTAVYQQLLALDDFVTFKKLMVKRNVELELEAVHALQKQGVP 140
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A8K1CJL2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJL2_PYTOL) HSP 1 Score: 160 bits (405), Expect = 2.390e-45 Identity = 74/131 (56.49%), Postives = 103/131 (78.63%), Query Frame = 1
Query: 19 EGVTDK-DWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQGL 408
E TD+ DW+F+++++L +SP W+ +M FIDENCA FDT EENK YT LH QF+++VET+ S+LAE+G+T DF ++ E +R + DIS V Q++A+DDFVTFKKLMVKRN+ELELEA++AL+E+ L
Sbjct: 2 EFTTDESDWVFDYVMTLFRSPAWEVPIMCFIDENCASFDTGEENKFIYTDLHAQFREVVETVLCSNLAEIGLTASDFAEICERARTASDISMEVVNQILAMDDFVTFKKLMVKRNLELELEAIKALREETL 132
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: K3XC66_GLOUD (Cilia- and flagella-associated protein 36 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC66_GLOUD) HSP 1 Score: 157 bits (396), Expect = 6.880e-44 Identity = 69/126 (54.76%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 31 DKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQGL 408
+ DW+F++++++ +SP W+ +M FIDENCA FDT +ENK YT LH+QF+D+VE + SSLAE+G+T DF ++ E SR DIS V Q++A+DDF+TFKKLMVKRN+ELELEA++AL+E+ +
Sbjct: 10 ESDWVFDYVMNIFRSPAWEVPIMCFIDENCASFDTGDENKFVYTDLHQQFRDVVEGVLGSSLAEIGITSSDFAEICERSRSVSDISMEVVNQILAMDDFLTFKKLMVKRNLELELEAIKALREEAI 135
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A7S1G6Y0_9STRA (Cilia- and flagella-associated protein 36 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6Y0_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.020e-43 Identity = 65/126 (51.59%), Postives = 100/126 (79.37%), Query Frame = 1
Query: 28 TDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQG 405
T+ DWLF++++++ K+P W+ +M FID+NC VFD D+ENK +Y+ LH +FK+LV+TL + L E+GV EDFV++ +R +D+++ V++Q++A+DDF+TFKKLM KRN+ELELEAV+ALK +
Sbjct: 12 TEHDWLFDYIMNVFKAPTWEVPIMSFIDDNCVVFDNDDENKFAYSELHDKFKELVDTLLETHLTEIGVAPEDFVEICSQARDGRDVNRMVFDQIMAVDDFMTFKKLMQKRNMELELEAVKALKSRA 137
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A6S9FTJ7_HETAK (Cilia- and flagella-associated protein 36 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FTJ7_HETAK) HSP 1 Score: 151 bits (381), Expect = 4.180e-43 Identity = 68/131 (51.91%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 19 EGVTDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQGLP 411
E + DW+F++++S+ KSP WD +VMG ID+NC VF +EEN+ YT +H FK VE L LAE+GV+ + F++ E +R S+DI++ VY+Q++A++DF+TFKKLMVKRN+ELELEAVR L+++G+P
Sbjct: 6 ESFGEYDWIFDYVMSVFKSPLWDLTVMGIIDDNCIVFSNEEENRFEYTDIHNLFKLQVEQLLTQHLAELGVSEDMFLEACERARSSRDINQEVYDQIVAMEDFLTFKKLMVKRNMELELEAVRELQKEGVP 136
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A5D6XY03_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY03_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.850e-43 Identity = 68/126 (53.97%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 31 DKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQGL 408
+ DW+F++++++ +SP W+ +M FIDENCA FDT +ENK YT LH+QF+ +VE + SSLAE+G++ DF D+ E R S DIS V Q++A+DDF+TFKKLM+KRN+ELELEA++AL+E+ L
Sbjct: 10 ESDWVFDYVMNIFRSPAWEVPIMCFIDENCASFDTSDENKFVYTELHQQFRQVVEEVLGSSLAEIGISPSDFADICERGRHSSDISMEVVHQVLAMDDFLTFKKLMIKRNLELELEAIKALREETL 135
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A6G0WLL1_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLL1_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.150e-42 Identity = 66/128 (51.56%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 16 DEGVTDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKE 399
D D +W+F+F+++L +SP W+ +MGFID+NCA FDTD+ENK YT LH QF+D V+ + ++LAE+G+T DF D+ R S D+S +V Q++A+DDF+TFKKLMVKRN+EL+LE + A++E
Sbjct: 3 DLAQRDSEWVFDFVMNLFQSPAWEVPIMGFIDDNCASFDTDDENKFIYTDLHSQFRDTVDGVLTANLAEIGITASDFADICTKCRHSTDVSMAVINQILAIDDFLTFKKLMVKRNLELDLEVITAVRE 130
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A1V9ZWG9_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWG9_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.460e-42 Identity = 68/127 (53.54%), Postives = 99/127 (77.95%), Query Frame = 1
Query: 22 GVTDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQ 402
G+ D +W+F+F+++L +SP W+ +M FIDENCA FDTDEENK Y+ LH+QF+D+V+ + ++LAE+G+T DF D+ R S +IS +V Q++A+DDFVTFKKLMVKRN+ELELE + A+++Q
Sbjct: 97 GIADSEWVFDFVMNLFQSPAWEVPIMCFIDENCASFDTDEENKFIYSDLHQQFRDVVDGVLTANLAEIGITPTDFADICVQCRNSTEISMAVINQILAIDDFVTFKKLMVKRNLELELEVITAVRDQ 223
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: A0A2D4BMY6_PYTIN (Cilia- and flagella-associated protein 36 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMY6_PYTIN) HSP 1 Score: 151 bits (381), Expect = 9.360e-42 Identity = 67/129 (51.94%), Postives = 96/129 (74.42%), Query Frame = 1
Query: 16 DEGVTDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQ 402
D + DW+F++++ L +SP W+ +M FIDENCA FDT +ENK YT LH QF+D+VE + +LAE+G+T DF ++ E R S DIS V Q++A+DDF+TFKKLMVKRN+ELELEA++A++++
Sbjct: 5 DFSSDESDWVFDYVMHLFRSPAWEVPIMCFIDENCASFDTGDENKFVYTDLHXQFRDVVEGVLCDNLAEIGLTAADFAEICERGRYSTDISLEVVNQILAMDDFLTFKKLMVKRNLELELEAIKAMRDE 133
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Match: T0R0R9_SAPDV (Cilia- and flagella-associated protein 36 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R0R9_SAPDV) HSP 1 Score: 150 bits (380), Expect = 2.090e-41 Identity = 65/124 (52.42%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 31 DKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKLSYTSLHRQFKDLVETLCFSSLAEVGVTVEDFVDVLEGSRLSQDISKSVYEQLIALDDFVTFKKLMVKRNVELELEAVRALKEQ 402
D +W+F+F+++L +SP W+ +M FIDENCA FDTD+ENK YT LH+QF+D+V+ + ++LAE+G++ DF D+ R S +IS +V Q++A+DDF+TFKKLMVKRN+ELELE + A+++Q
Sbjct: 8 DSEWVFDFIMNLFQSPAWEVPIMSFIDENCASFDTDDENKFIYTDLHQQFRDVVDGVLTANLAEIGISAADFADICVQCRNSTEISMAVVNQILAIDDFLTFKKLMVKRNLELELEVITAVRDQ 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig60286.13569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig60286.13569.1 >prot_H-elongata_contig60286.13569.1 ID=prot_H-elongata_contig60286.13569.1|Name=mRNA_H-elongata_contig60286.13569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp MNYGPDEGVTDKDWLFEFLLSLLKSPQWDASVMGFIDENCAVFDTDEENKback to top mRNA from alignment at H-elongata_contig60286:586..1607- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig60286.13569.1 ID=mRNA_H-elongata_contig60286.13569.1|Name=mRNA_H-elongata_contig60286.13569.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1022bp|location=Sequence derived from alignment at H-elongata_contig60286:586..1607- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig60286:586..1607- >mRNA_H-elongata_contig60286.13569.1 ID=mRNA_H-elongata_contig60286.13569.1|Name=mRNA_H-elongata_contig60286.13569.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at H-elongata_contig60286:586..1607- (Himanthalia elongata Himel1 dioecious)back to top |