mRNA_H-elongata_contig59481.13462.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig59481.13462.1
Unique NamemRNA_H-elongata_contig59481.13462.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE)

HSP 1 Score: 609 bits (1571), Expect = 8.040e-212
Identity = 343/483 (71.01%), Postives = 351/483 (72.67%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGK-------------------------------------------------------QAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            HDET AKENDDGSNQW+SVLKGAAIKKKGEGRAAHISDIIGVDRG                                                             G D +AVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVG HQDGYWNCARMLEQIPGLIAIHELTSEPHRQL+MVFDNSTGHSAFG GALVGEHVALRPGGAQG LRNFEDDEGN VHTTFRVGDKLRF TNVFAPKTEEELEAEKKAAEEAEEKGLPVKK+KKNGKNLGK                                                       QAITAFNRGGEGRQQVVDNT QGEE+GG  XXXXXXXXXXXXX R RCCV+RVLSELKAFREELNMVEKLFKA GHLC+FLPKYHPELN IERYWGYIKHLLRLHCEYSLRHMLQ+L GALSGVPARFIRAWSRVTWLYIEAYDEGL
Sbjct:  215 HDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPTDGEAPMHWVFPGRYERSGIYFGRKEGEGNDGYAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLWEGEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGL 697          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 3.270e-136
Identity = 245/489 (50.10%), Postives = 278/489 (56.85%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLG---------------------------------------------------------KQAITAFNRGGEGRQQVVDNTAQ-----GEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            HDET AKENDDG  QWMS+ KGAAIKKKGEGRA H+SDIIGVDRG                                                            G D HAVK VQDAV+LLK +P  C V KT+NDPST AVIMTVG +QDG+WN  RM +QIPGLIAIHELTSEPHR L+MVFDNSTGH+A+   ALV  H+   PGG Q  L +F DDEGN V TTFR GDKL F   V+A KT E+L+AE     E E K  P  K  +NG NLG                                                         + AIT+FNRGGEGRQQ +D+ A+     GE  G                 R RCC+ RV +ELKAF+ ELN +EK+FK  GH+CIFL KYHPELN IERYWGY+KHLLRLHCEYSL+HML+IL GALSGVP RF+R WSRVTWLY+EAYDEGL
Sbjct:  790 HDETTAKENDDGGCQWMSIEKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQEDMDVLEDVVDLVEVEPATEDGEAPKHGASTLYNGRSGIYFGRQEGDGVDGHAVKFVQDAVKLLKAMPDDCGVTKTENDPSTGAVIMTVGQNQDGFWNNERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAE-----EEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSRVTWLYLEAYDEGL 1273          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 6.380e-135
Identity = 237/486 (48.77%), Postives = 279/486 (57.41%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK------------------------------------------GL-------PVK----KAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXX-----RHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            HDET AKENDDG  QWM   KGAAIKKKGEGRA H+SDIIGVDRG                                                             G+D HAVK VQDAVELLK +P  C V KTKNDP T AVIMTVG + DGYW   RM +QIPGLIAIHELTSEPHR ++MVFDNSTGH+A+ +GALV  H+  +PGG Q  L +F DD+GN VH TFR GD + F T+V+A KT E+LE E++ A + + K                                          GL       P++    KA K  +   K AITAFNRGGE RQQ +D+ A+ +++GG                     R RCC+ +V +ELKAF+ ELN +EK+FK  GH+CIFL KYHPELN IERYWGY+KHLLRL CEYSL HML+IL GALSGVP  F+R WSRVTWLY+EAYDEGL
Sbjct:  379 HDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQEDKSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGL 864          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5KH16_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH16_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 5.070e-130
Identity = 208/281 (74.02%), Postives = 212/281 (75.44%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGK 660
            HDET AKENDDGSNQW+SVLKGAAIKKKGEGRAAHISDIIGVDRG                                                             GKD HAVKLVQDAVELLKGIPGACQVKKTKND STAAVIMTVG +QDGYWNCARMLEQIPGLIAIHELTSEPHRQL+MVFDNSTGHSAFG GALVGEHVALRPGGAQG LRNFEDDEGN VHTTFRVGDKLRF TNVFAPKTEEELEAEKKAAEEAEEKGLPVKK+KKNGKNLGK
Sbjct:   42 HDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRYERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDSSTAAVIMTVGQYQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGK 322          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 7.890e-122
Identity = 199/380 (52.37%), Postives = 240/380 (63.16%), Query Frame = 1
Query:  136 GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK------------------------------------------GL-------PVK----KAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXX-----RHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            G+D HAVK VQDAVELLK +P  C V KTKNDP T AVIMTVG + DGYW   RM +QIPGLIAIHELTSEPHR ++MVFDNSTGH+A+ +GALV  H+  +PGG Q  L +F DD+GN VH TFR GD + F T+V+A KT E+LE E++ A + + K                                          GL       P++    KA K  +   K AITAFNRGGE RQQ +D+ A+ +++GG                     R RCC+ +V +ELKAF+ ELN +EK+FK  GH+CIFL KYHPELN IERYWGY KH+LRL CEYSL HML+IL GALSGVP  F+R WSRVTWLY+EAYDEGL
Sbjct:   52 GEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGDFNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGL 431          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 6.460e-119
Identity = 207/441 (46.94%), Postives = 255/441 (57.82%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG---------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEE-----------LEAEKKAAEEAEEKGLPVKKAKKNGKNL------------------------------GKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            HDET AKENDDG +QW+S  KGAA+K KGEGRAAHISD+IGVD G                                 G+D H VK +QDAV++LK     C+V KT NDP TAAVIMTVG   DGYW   RM  Q+P  IA+ EL++ PHRQ + +FDNSTGH+A+ D AL+   ++L PGG +  LR FEDD G TVH TF+VGD L     +F PKTE +           L+ +K         G P+    K G+ +                               +QAI AFN+GGE R++V++   Q   E                  R RCC+ RV S+L AF+ +LN V+++FK  GH+CIFLPKYHPELN IERYWGY+KH+LRLHCEYSL HML+IL  ALSGVP   IRAWSRV WLYIEAYD+G+
Sbjct:  384 HDETTAKENDDGDHQWLSADKGAAMKVKGEGRAAHISDVIGVDLGQLQISEEVWGMMQEDKDAGTERSGKYFGRTEGEGEDSHKVKEIQDAVKVLKKAAADCEVLKTANDPRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNKGGEQRERVLE---QARREQQSSPAEGPAAEGRAAARRQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRVVWLYIEAYDDGM 821          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JVL6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVL6_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 1.170e-103
Identity = 163/176 (92.61%), Postives = 167/176 (94.89%), Query Frame = 1
Query:  136 GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEG-NTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGK 660
            GKD HAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVG HQDGYWNCARMLE+IPGLIAIHELTSEPHRQL MVFDNSTG+SAFG GALVGEH+ALRPGGAQG LRN EDDEG N VHTTFRVGDKLRF TNVFAPKTEEELEAEKKAAEEAEEKGLPVKK+KKNGKNLGK
Sbjct:  193 GKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLERIPGLIAIHELTSEPHRQLFMVFDNSTGYSAFGAGALVGEHIALRPGGAQGALRNCEDDEGKNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGK 368          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5KS65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS65_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 8.080e-103
Identity = 171/243 (70.37%), Postives = 173/243 (71.19%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNV 546
            HDET AKENDDGSNQW+SVLKGAAI KKGEGRAAHISDIIGVDRG                                                             GKD HAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVG HQDGYWNCARMLEQIPGLIAIHELTSEPHRQL+MVFDNSTGHSAFG G LVGEHVALRPGGAQG LRNFEDDEGN VHTTFRVGDKLRF TNV
Sbjct:  197 HDETTAKENDDGSNQWVSVLKGAAINKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRYERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGTLVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNV 439          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 6.000e-97
Identity = 190/439 (43.28%), Postives = 236/439 (53.76%), Query Frame = 1
Query:    1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG--------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK-----------------------------GLPVKKAKKNGKNLG-----------KQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            HDET AKENDD  +QWMS  KGAA+K   E RAAHISD+IGVD G                                G   H VK VQDAVE+LK     C+  K  NDP TAAVIM VG   DGYW    M  Q+P +IA+ ELTS PHRQ + +FDNSTGH+ +   AL+  ++ L PGG +  LR FED +G  V+ TF++GD L     +F PKTEE+ + +K+ +  A +K                             GL   + +K G   G           +QAI AFN+GGE R++V++     +++                    R C              LN VE++FK  GH+CIFLPKYHPELN IERYWG IKH+LRLHCE SL HML+IL GA+SGVP   IRAWSRV WLY+EAYD+GL
Sbjct:  252 HDETTAKENDDEDHQWMSAEKGAAMKVNREVRAAHISDVIGVDLGQLQISQEAWGMMQEDKDVTTGRSGKYFGRKGEGVKGHEVKEVQDAVEVLKAAAADCEELKMANDPQTAAVIMPVGQQHDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEKRGLVKGCNKCKADNAAARQAIAAFNKGGEERERVLEQAWWEQQK----------FFHRGSRGSGRGCWKEAA---------LNKVEQIFKEAGHVCIFLPKYHPELNAIERYWGSIKHVLRLHCEISLTHMLEILRGAMSGVPLDHIRAWSRVVWLYVEAYDDGL 671          
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5KZJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ0_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 2.390e-93
Identity = 187/323 (57.89%), Postives = 195/323 (60.37%), Query Frame = 1
Query:  136 GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGY-WNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
            GKD HAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVI+TV  HQD + W+   +    PG            R                                                         R               AEK A                      +QAITAFN GGEGRQQVVDNT QGEE+GG  XXXXXXXXXXXXX R RCCV+RVLSELKAFREELNMVEKLFKA GHLCIFLPKYHPELN IERYWGYIKHLLRLHCEYSLRHMLQ+L GALSGVPARFIRAWSRVTWLYIEAYDEGL
Sbjct:   52 GKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVILTVAQHQDSWSWSSTTL----PGT----------RRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSACR---------------AEKAAT---------------------RQAITAFNSGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGL 324          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L669_9PHAE8.040e-21271.01Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ42_9PHAE3.270e-13650.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K659_9PHAE6.380e-13548.77Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH16_9PHAE5.070e-13074.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JT56_9PHAE7.890e-12252.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJM4_9PHAE6.460e-11946.94Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVL6_9PHAE1.170e-10392.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KS65_9PHAE8.080e-10370.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD27_9PHAE6.000e-9743.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZJ0_9PHAE2.390e-9357.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig59481contigH-elongata_contig59481:1667..3114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score112.5
Seed ortholog evalue4.3e-22
Seed eggNOG ortholog5346.XP_001838612.1
EggNOG OGs22BGZ@155619,29JY0@1,2RT6R@2759,39VBJ@33154,3P12S@4751,3V3WY@5204,3W9QD@5338
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1101
Cds size1089
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig59481.13462.1prot_H-elongata_contig59481.13462.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig59481 1679..3114 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930963.7665715-UTR-H-elongata_contig59481:1666..16781622930963.7665715-UTR-H-elongata_contig59481:1666..1678Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig59481 1667..1678 +
1691679642.569847-UTR-H-elongata_contig59481:1666..16781691679642.569847-UTR-H-elongata_contig59481:1666..1678Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig59481 1667..1678 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930963.7836738-CDS-H-elongata_contig59481:1678..18011622930963.7836738-CDS-H-elongata_contig59481:1678..1801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59481 1679..1801 +
1691679642.5829866-CDS-H-elongata_contig59481:1678..18011691679642.5829866-CDS-H-elongata_contig59481:1678..1801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59481 1679..1801 +
1622930963.8037534-CDS-H-elongata_contig59481:1983..25071622930963.8037534-CDS-H-elongata_contig59481:1983..2507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59481 1984..2507 +
1691679642.596135-CDS-H-elongata_contig59481:1983..25071691679642.596135-CDS-H-elongata_contig59481:1983..2507Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59481 1984..2507 +
1622930963.8205044-CDS-H-elongata_contig59481:2672..31141622930963.8205044-CDS-H-elongata_contig59481:2672..3114Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59481 2673..3114 +
1691679642.6094859-CDS-H-elongata_contig59481:2672..31141691679642.6094859-CDS-H-elongata_contig59481:2672..3114Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig59481 2673..3114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig59481.13462.1

>prot_H-elongata_contig59481.13462.1 ID=prot_H-elongata_contig59481.13462.1|Name=mRNA_H-elongata_contig59481.13462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=363bp
MAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRGGKDDHAVKL
VQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQI
PGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGT
LRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK
GLPVKKAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGEGGDSG
GRGAAGEAGERHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKY
HPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSR
VTWLYIEAYDEGL
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mRNA from alignment at H-elongata_contig59481:1667..3114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig59481.13462.1 ID=mRNA_H-elongata_contig59481.13462.1|Name=mRNA_H-elongata_contig59481.13462.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1448bp|location=Sequence derived from alignment at H-elongata_contig59481:1667..3114+ (Himanthalia elongata Himel1 dioecious)
CACGACGAGACCATGGCGAAGGAGAACGACGACGGCAGCAACCAGTGGAT GTCGGTGTTGAAGGGTGCCGCCATCAAGAAGAAGGGGGAAGGACGCGCCG CACACATCTCTGACATCATTGGGGTGGATAGAGGGGTGGCAGCATAGGGA AGGAGGCCTGGGGCATGATGCAGGAAGACATGAACGTGGTCGAAGATAAG GAGAACCCGGTTGAGGTCGCGCGGCCGGCTCTCAAGGACGGAGAGGAGCC GACGCATTGGGTGTTTCCCGGACGCTACGAGCGTTCCGGGATCAACTTCG GCAGGAAAGAGGGCGAGGGGAAGGACGACCATGCCGTGAAGCTCGTGCAG GATGCCGTCGAGCTGCTGAAAGGGATTCCCGGCGCCTGCCAGGTGAAGAA AACGAAGAACGACCCTTCCACGGCGGCAGTCATCATGACTGTTGGGGTAC ACCAGGACGGGTACTGGAACTGCGCACGGATGTTGGAGCAAATTCCGGGG CTCATTGCCATCCACGAGCTGACAAGCGAGCCACACCGGCAGCTGATCAT GGTCTTCGACAACTCGACCGGGCACTCGGCGTTCGGCGACGGCGCATTGG TGGGTGAGCACGTTGCCCTGAGGCCAGGGGGAGCGCAGGGCACTCTTCGC AATTTCGAGGACGACGAGGGGAACACCGTTCACACCACCTTCAGGGTCGG CGACAAGCTCCGTTTTCCCACGAACGTGTTTGCCCCAAAAACGGAGGAGG AGCTCGAGGCGGAAAAGAAAGCGGCAGAGGAGGCGGAGGAGAAGGGGTTG CCGGTGAAGAAAGCCAAAAAGAACGGAAAGAACCTCGGGAAGTTCAAGAA GGGCGACGAGGTCAAGGCGACTGGCCCCACCTCCGCTCTTATCGGCCTGA CGAAAGGAGGAAAGCAGCTGCTCATGGAGATGGGGCTGTGGGAAGGCGAG ACAACCCTACGCCTTCACGAGTGCAGCGCGTGCAAGGTGGAAAAGGCGGC AACAAGGCAAGCCATTACCGCCTTCAACCGCGGTGGAGAGGGGCGGCAGC AGGTGGTGGACAACACGGCGCAGGGAGAGGAGGAGGGCGGAGAAGGCGGG GACTCGGGTGGGAGGGGGGCAGCTGGTGAAGCAGGCGAGAGGCATCGCTG CTGCGTCCTGCGCGTTCTGTCTGAGCTCAAGGCGTTCAGGGAGGAGCTCA ATATGGTTGAGAAGCTCTTCAAGGCACAGGGGCACCTGTGCATCTTCTTG CCGAAGTACCACCCAGAGCTCAACGTAATCGAGCGATACTGGGGGTACAT CAAGCACCTCCTCCGCCTCCACTGCGAGTATTCCCTTCGCCACATGCTTC AGATCTTGACCGGCGCCTTGAGCGGCGTACCCGCACGGTTTATCCGCGCG TGGAGCAGGGTGACGTGGCTGTACATCGAAGCCTACGACGAGGGCCTG
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Coding sequence (CDS) from alignment at H-elongata_contig59481:1667..3114+

>mRNA_H-elongata_contig59481.13462.1 ID=mRNA_H-elongata_contig59481.13462.1|Name=mRNA_H-elongata_contig59481.13462.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2178bp|location=Sequence derived from alignment at H-elongata_contig59481:1667..3114+ (Himanthalia elongata Himel1 dioecious)
ATGGCGAAGGAGAACGACGACGGCAGCAACCAGTGGATGTCGGTGTTGAA
GGGTGCCGCCATCAAGAAGAAGGGGGAAGGACGCGCCGCACACATCTCTG
ACATCATTGGGGTGGATAGAGGGATGGCGAAGGAGAACGACGACGGCAGC
AACCAGTGGATGTCGGTGTTGAAGGGTGCCGCCATCAAGAAGAAGGGGGA
AGGACGCGCCGCACACATCTCTGACATCATTGGGGTGGATAGAGGGGGGA
AGGACGACCATGCCGTGAAGCTCGTGCAGGATGCCGTCGAGCTGCTGAAA
GGGATTCCCGGCGCCTGCCAGGTGAAGAAAACGAAGAACGACCCTTCCAC
GGCGGCAGTCATCATGACTGTTGGGGTACACCAGGACGGGTACTGGAACT
GCGCACGGATGTTGGAGCAAATTCCGGGGCTCATTGCCATCCACGAGCTG
ACAAGCGAGCCACACCGGCAGCTGATCATGGTCTTCGACAACTCGACCGG
GCACTCGGCGTTCGGCGACGGCGCATTGGTGGGTGAGCACGTTGCCCTGA
GGCCAGGGGGAGCGCAGGGCACTCTTCGCAATTTCGAGGACGACGAGGGG
AACACCGTTCACACCACCTTCAGGGTCGGCGACAAGCTCCGTTTTCCCAC
GAACGTGTTTGCCCCAAAAACGGAGGAGGAGCTCGAGGCGGAAAAGAAAG
CGGCAGAGGAGGCGGAGGAGAAGGGGTTGCCGGTGAAGAAAGCCAAAAAG
AACGGAAAGAACCTCGGGAAGGGAAGGACGACCATGCCGTGAAGCTCGTG
CAGGATGCCGTCGAGCTGCTGAAAGGGATTCCCGGCGCCTGCCAGGTGAA
GAAAACGAAGAACGACCCTTCCACGGCGGCAGTCATCATGACTGTTGGGG
TACACCAGGACGGGTACTGGAACTGCGCACGGATGTTGGAGCAAATTCCG
GGGCTCATTGCCATCCACGAGCTGACAAGCGAGCCACACCGGCAGCTGAT
CATGGTCTTCGACAACTCGACCGGGCACTCGGCGTTCGGCGACGGCGCAT
TGGTGGGTGAGCACGTTGCCCTGAGGCCAGGGGGAGCGCAGGGCACTCTT
CGCAATTTCGAGGACGACGAGGGGAACACCGTTCACACCACCTTCAGGGT
CGGCGACAAGCTCCGTTTTCCCACGAACGTGTTTGCCCCAAAAACGGAGG
AGGAGCTCGAGGCGGAAAAGAAAGCGGCAGAGGAGGCGGAGGAGAAGGGG
TTGCCGGTGAAGAAAGCCAAAAAGAACGGAAAGAACCTCGGGAAGCAAGC
CATTACCGCCTTCAACCGCGGTGGAGAGGGGCGGCAGCAGGTGGTGGACA
ACACGGCGCAGGGAGAGGAGGAGGGCGGAGAAGGCGGGGACTCGGGTGGG
AGGGGGGCAGCTGGTGAAGCAGGCGAGAGGCATCGCTGCTGCGTCCTGCG
CGTTCTGTCTGAGCTCAAGGCGTTCAGGGAGGAGCTCAATATGGTTGAGA
AGCTCTTCAAGGCACAGGGGCACCTGTGCATCTTCTTGCCGAAGTACCAC
CCAGAGCTCAACGTAATCGAGCGATACTGGGGGTACATCAAGCACCTCCT
CCGCCTCCACTGCGAGTATTCCCTTCGCCACATGCTTCAGATCTTGACCG
GCGCCTTGAGCGGCGTACCCGCACGGTTTATCCGCGCGTGGAGCAGGGTG
ACGTGGCTGTACATCGAAGCCTACGACGAGGGCCTGGCAAGCCATTACCG
CCTTCAACCGCGGTGGAGAGGGGCGGCAGCAGGTGGTGGACAACACGGCG
CAGGGAGAGGAGGAGGGCGGAGAAGGCGGGGACTCGGGTGGGAGGGGGGC
AGCTGGTGAAGCAGGCGAGAGGCATCGCTGCTGCGTCCTGCGCGTTCTGT
CTGAGCTCAAGGCGTTCAGGGAGGAGCTCAATATGGTTGAGAAGCTCTTC
AAGGCACAGGGGCACCTGTGCATCTTCTTGCCGAAGTACCACCCAGAGCT
CAACGTAATCGAGCGATACTGGGGGTACATCAAGCACCTCCTCCGCCTCC
ACTGCGAGTATTCCCTTCGCCACATGCTTCAGATCTTGACCGGCGCCTTG
AGCGGCGTACCCGCACGGTTTATCCGCGCGTGGAGCAGGGTGACGTGGCT
GTACATCGAAGCCTACGACGAGGGCCTG
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