mRNA_H-elongata_contig59481.13462.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 609 bits (1571), Expect = 8.040e-212 Identity = 343/483 (71.01%), Postives = 351/483 (72.67%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGK-------------------------------------------------------QAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
HDET AKENDDGSNQW+SVLKGAAIKKKGEGRAAHISDIIGVDRG G D +AVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVG HQDGYWNCARMLEQIPGLIAIHELTSEPHRQL+MVFDNSTGHSAFG GALVGEHVALRPGGAQG LRNFEDDEGN VHTTFRVGDKLRF TNVFAPKTEEELEAEKKAAEEAEEKGLPVKK+KKNGKNLGK QAITAFNRGGEGRQQVVDNT QGEE+GG XXXXXXXXXXXXX R RCCV+RVLSELKAFREELNMVEKLFKA GHLC+FLPKYHPELN IERYWGYIKHLLRLHCEYSLRHMLQ+L GALSGVPARFIRAWSRVTWLYIEAYDEGL
Sbjct: 215 HDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPTDGEAPMHWVFPGRYERSGIYFGRKEGEGNDGYAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGKFKKDDEVKATGPTAVLIGLPKGGKQLLMEMGLWEGEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGL 697
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 430 bits (1105), Expect = 3.270e-136 Identity = 245/489 (50.10%), Postives = 278/489 (56.85%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLG---------------------------------------------------------KQAITAFNRGGEGRQQVVDNTAQ-----GEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
HDET AKENDDG QWMS+ KGAAIKKKGEGRA H+SDIIGVDRG G D HAVK VQDAV+LLK +P C V KT+NDPST AVIMTVG +QDG+WN RM +QIPGLIAIHELTSEPHR L+MVFDNSTGH+A+ ALV H+ PGG Q L +F DDEGN V TTFR GDKL F V+A KT E+L+AE E E K P K +NG NLG + AIT+FNRGGEGRQQ +D+ A+ GE G R RCC+ RV +ELKAF+ ELN +EK+FK GH+CIFL KYHPELN IERYWGY+KHLLRLHCEYSL+HML+IL GALSGVP RF+R WSRVTWLY+EAYDEGL
Sbjct: 790 HDETTAKENDDGGCQWMSIEKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQEDMDVLEDVVDLVEVEPATEDGEAPKHGASTLYNGRSGIYFGRQEGDGVDGHAVKFVQDAVKLLKAMPDDCGVTKTENDPSTGAVIMTVGQNQDGFWNNERMCKQIPGLIAIHELTSEPHRPLVMVFDNSTGHAAYETSALVASHINKGPGGGQAILDDFLDDEGNLVRTTFRAGDKLLFKAQVYAAKTPEQLKAE-----EEELKRNPKYKKPRNGDNLGEFAAGTEIRASGRTSRLIGQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSRVTWLYLEAYDEGL 1273
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 6.380e-135 Identity = 237/486 (48.77%), Postives = 279/486 (57.41%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK------------------------------------------GL-------PVK----KAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXX-----RHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
HDET AKENDDG QWM KGAAIKKKGEGRA H+SDIIGVDRG G+D HAVK VQDAVELLK +P C V KTKNDP T AVIMTVG + DGYW RM +QIPGLIAIHELTSEPHR ++MVFDNSTGH+A+ +GALV H+ +PGG Q L +F DD+GN VH TFR GD + F T+V+A KT E+LE E++ A + + K GL P++ KA K + K AITAFNRGGE RQQ +D+ A+ +++GG R RCC+ +V +ELKAF+ ELN +EK+FK GH+CIFL KYHPELN IERYWGY+KHLLRL CEYSL HML+IL GALSGVP F+R WSRVTWLY+EAYDEGL
Sbjct: 379 HDETTAKENDDGGCQWMDGQKGAAIKKKGEGRAVHVSDIIGVDRGVAVIGKEAWGMMQEDKSVGYAPAVEVIAQGPATGDGDVPECFVVRQRYERSGIYFGRKEGDGEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGL 864
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5KH16_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH16_9PHAE) HSP 1 Score: 385 bits (988), Expect = 5.070e-130 Identity = 208/281 (74.02%), Postives = 212/281 (75.44%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGK 660
HDET AKENDDGSNQW+SVLKGAAIKKKGEGRAAHISDIIGVDRG GKD HAVKLVQDAVELLKGIPGACQVKKTKND STAAVIMTVG +QDGYWNCARMLEQIPGLIAIHELTSEPHRQL+MVFDNSTGHSAFG GALVGEHVALRPGGAQG LRNFEDDEGN VHTTFRVGDKLRF TNVFAPKTEEELEAEKKAAEEAEEKGLPVKK+KKNGKNLGK
Sbjct: 42 HDETTAKENDDGSNQWVSVLKGAAIKKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRYERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDSSTAAVIMTVGQYQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGALVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGK 322
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 371 bits (952), Expect = 7.890e-122 Identity = 199/380 (52.37%), Postives = 240/380 (63.16%), Query Frame = 1
Query: 136 GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK------------------------------------------GL-------PVK----KAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXX-----RHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
G+D HAVK VQDAVELLK +P C V KTKNDP T AVIMTVG + DGYW RM +QIPGLIAIHELTSEPHR ++MVFDNSTGH+A+ +GALV H+ +PGG Q L +F DD+GN VH TFR GD + F T+V+A KT E+LE E++ A + + K GL P++ KA K + K AITAFNRGGE RQQ +D+ A+ +++GG R RCC+ +V +ELKAF+ ELN +EK+FK GH+CIFL KYHPELN IERYWGY KH+LRL CEYSL HML+IL GALSGVP F+R WSRVTWLY+EAYDEGL
Sbjct: 52 GEDGHAVKFVQDAVELLKAMPADCGVTKTKNDPRTGAVIMTVGQNSDGYWTNDRMCKQIPGLIAIHELTSEPHRPMVMVFDNSTGHAAYEEGALVASHIQKKPGGGQVILDDFLDDQGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGDFNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGL 431
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 374 bits (961), Expect = 6.460e-119 Identity = 207/441 (46.94%), Postives = 255/441 (57.82%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG---------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEE-----------LEAEKKAAEEAEEKGLPVKKAKKNGKNL------------------------------GKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
HDET AKENDDG +QW+S KGAA+K KGEGRAAHISD+IGVD G G+D H VK +QDAV++LK C+V KT NDP TAAVIMTVG DGYW RM Q+P IA+ EL++ PHRQ + +FDNSTGH+A+ D AL+ ++L PGG + LR FEDD G TVH TF+VGD L +F PKTE + L+ +K G P+ K G+ + +QAI AFN+GGE R++V++ Q E R RCC+ RV S+L AF+ +LN V+++FK GH+CIFLPKYHPELN IERYWGY+KH+LRLHCEYSL HML+IL ALSGVP IRAWSRV WLYIEAYD+G+
Sbjct: 384 HDETTAKENDDGDHQWLSADKGAAMKVKGEGRAAHISDVIGVDLGQLQISEEVWGMMQEDKDAGTERSGKYFGRTEGEGEDSHKVKEIQDAVKVLKKAAADCEVLKTANDPRTAAVIMTVGKQHDGYWTSDRMCAQLPAAIAMFELSNGPHRQGVFIFDNSTGHNAYDDDALLAHKISLAPGGEKAALRVFEDDNGKTVHPTFQVGDTLLTDKKIFLPKTEAQKKMKGRKFGTGLDKKKYPVGTRVTSGSPLLGLNKGGEQMLKEMGLWRLDGERAKGLVKCCNKCKADNAASRQAIAAFNKGGEQRERVLE---QARREQQSSPAEGPAAEGRAAARRQRCCMERVFSDLGAFKAQLNKVQQIFKDAGHVCIFLPKYHPELNAIERYWGYVKHVLRLHCEYSLTHMLKILPRALSGVPLEHIRAWSRVVWLYIEAYDDGM 821
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JVL6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVL6_9PHAE) HSP 1 Score: 321 bits (822), Expect = 1.170e-103 Identity = 163/176 (92.61%), Postives = 167/176 (94.89%), Query Frame = 1
Query: 136 GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEG-NTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGK 660
GKD HAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVG HQDGYWNCARMLE+IPGLIAIHELTSEPHRQL MVFDNSTG+SAFG GALVGEH+ALRPGGAQG LRN EDDEG N VHTTFRVGDKLRF TNVFAPKTEEELEAEKKAAEEAEEKGLPVKK+KKNGKNLGK
Sbjct: 193 GKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLERIPGLIAIHELTSEPHRQLFMVFDNSTGYSAFGAGALVGEHIALRPGGAQGALRNCEDDEGKNPVHTTFRVGDKLRFTTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKSKKNGKNLGK 368
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5KS65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS65_9PHAE) HSP 1 Score: 321 bits (822), Expect = 8.080e-103 Identity = 171/243 (70.37%), Postives = 173/243 (71.19%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG-------------------------------------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNV 546
HDET AKENDDGSNQW+SVLKGAAI KKGEGRAAHISDIIGVDRG GKD HAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVG HQDGYWNCARMLEQIPGLIAIHELTSEPHRQL+MVFDNSTGHSAFG G LVGEHVALRPGGAQG LRNFEDDEGN VHTTFRVGDKLRF TNV
Sbjct: 197 HDETTAKENDDGSNQWVSVLKGAAINKKGEGRAAHISDIIGVDRGVAAIGKEAWGMMQEDMNVVEDKENPVEVARPAPKDGEAPTHRVFPGRYERSGIYFGRKEGEGKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGQHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLVMVFDNSTGHSAFGAGTLVGEHVALRPGGAQGALRNFEDDEGNPVHTTFRVGDKLRFTTNV 439
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5JD27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD27_9PHAE) HSP 1 Score: 313 bits (802), Expect = 6.000e-97 Identity = 190/439 (43.28%), Postives = 236/439 (53.76%), Query Frame = 1
Query: 1 HDETMAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRG--------------------------------GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGYWNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEK-----------------------------GLPVKKAKKNGKNLG-----------KQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
HDET AKENDD +QWMS KGAA+K E RAAHISD+IGVD G G H VK VQDAVE+LK C+ K NDP TAAVIM VG DGYW M Q+P +IA+ ELTS PHRQ + +FDNSTGH+ + AL+ ++ L PGG + LR FED +G V+ TF++GD L +F PKTEE+ + +K+ + A +K GL + +K G G +QAI AFN+GGE R++V++ +++ R C LN VE++FK GH+CIFLPKYHPELN IERYWG IKH+LRLHCE SL HML+IL GA+SGVP IRAWSRV WLY+EAYD+GL
Sbjct: 252 HDETTAKENDDEDHQWMSAEKGAAMKVNREVRAAHISDVIGVDLGQLQISQEAWGMMQEDKDVTTGRSGKYFGRKGEGVKGHEVKEVQDAVEVLKAAAADCEELKMANDPQTAAVIMPVGQQHDGYWTSDDMCAQLPAIIAMAELTSGPHRQGVFIFDNSTGHNPYDADALLAHNINLAPGGEKVALRVFEDVDGKKVYPTFQLGDTLLTDRKIFLPKTEEQKKNKKRKSGTALDKDKFPVGTKVVLRSPLLGLNKGGEQMLREMGLWRLRGEKRGLVKGCNKCKADNAAARQAIAAFNKGGEERERVLEQAWWEQQK----------FFHRGSRGSGRGCWKEAA---------LNKVEQIFKEAGHVCIFLPKYHPELNAIERYWGSIKHVLRLHCEISLTHMLEILRGAMSGVPLDHIRAWSRVVWLYVEAYDDGL 671
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Match: A0A6H5KZJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ0_9PHAE) HSP 1 Score: 294 bits (753), Expect = 2.390e-93 Identity = 187/323 (57.89%), Postives = 195/323 (60.37%), Query Frame = 1
Query: 136 GKDDHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVIMTVGVHQDGY-WNCARMLEQIPGLIAIHELTSEPHRQLIMVFDNSTGHSAFGDGALVGEHVALRPGGAQGTLRNFEDDEGNTVHTTFRVGDKLRFPTNVFAPKTEEELEAEKKAAEEAEEKGLPVKKAKKNGKNLGKQAITAFNRGGEGRQQVVDNTAQGEEEGGXXXXXXXXXXXXXXXXRHRCCVLRVLSELKAFREELNMVEKLFKAQGHLCIFLPKYHPELNVIERYWGYIKHLLRLHCEYSLRHMLQILTGALSGVPARFIRAWSRVTWLYIEAYDEGL 1101
GKD HAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVI+TV HQD + W+ + PG R R AEK A +QAITAFN GGEGRQQVVDNT QGEE+GG XXXXXXXXXXXXX R RCCV+RVLSELKAFREELNMVEKLFKA GHLCIFLPKYHPELN IERYWGYIKHLLRLHCEYSLRHMLQ+L GALSGVPARFIRAWSRVTWLYIEAYDEGL
Sbjct: 52 GKDGHAVKLVQDAVELLKGIPGACQVKKTKNDPSTAAVILTVAQHQDSWSWSSTTL----PGT----------RRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSACR---------------AEKAAT---------------------RQAITAFNSGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGL 324 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig59481.13462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig59481.13462.1 >prot_H-elongata_contig59481.13462.1 ID=prot_H-elongata_contig59481.13462.1|Name=mRNA_H-elongata_contig59481.13462.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=363bp MAKENDDGSNQWMSVLKGAAIKKKGEGRAAHISDIIGVDRGGKDDHAVKLback to top mRNA from alignment at H-elongata_contig59481:1667..3114+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig59481.13462.1 ID=mRNA_H-elongata_contig59481.13462.1|Name=mRNA_H-elongata_contig59481.13462.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1448bp|location=Sequence derived from alignment at H-elongata_contig59481:1667..3114+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig59481:1667..3114+ >mRNA_H-elongata_contig59481.13462.1 ID=mRNA_H-elongata_contig59481.13462.1|Name=mRNA_H-elongata_contig59481.13462.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2178bp|location=Sequence derived from alignment at H-elongata_contig59481:1667..3114+ (Himanthalia elongata Himel1 dioecious)back to top |