mRNA_H-elongata_contig58578.13346.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: D7FXW8_ECTSI (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXW8_ECTSI) HSP 1 Score: 306 bits (784), Expect = 1.100e-100 Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLR--REEGEEG---ATGADDFQRLDPPQMPIRPPHES 648
QGDITS TA+AIIDHFRGGLAELVVCDGAPDVTGLHD+DEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRD LLYSQL LLFERVTIAKPRSSRSSSIE+FVVCR + P GFE SMLTP+LDH++S NERLGPA NL+VPFVACGDLSGFDADKSYPL REEG++G T +QR+ P QMPIRPPHE+
Sbjct: 198 QGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAHS----ATNERLGPA---NLIVPFVACGDLSGFDADKSYPLEEPREEGKDGDSQLTSQRGYQRIPPAQMPIRPPHET 396
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A507E4B4_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E4B4_9FUNG) HSP 1 Score: 246 bits (629), Expect = 8.560e-79 Identity = 125/216 (57.87%), Postives = 157/216 (72.69%), Query Frame = 1
Query: 1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 648
V L + P QGDIT STA+ II HF G LA+LVVCDGAPDVTGLHDMDEY+QAQLLLAALNIT +VL PGGTF+AKIFRG+D+ LLY+Q+ + F VT +KPRSSR+SSIE+F+VC+ + P + P+ML P+LD+SY G NE G + ++VPF+ACGDLSGFD+D++Y L EGEE + LDP QMPIRPP+++
Sbjct: 77 VDLQAMAPLPGVIQLQGDITKSSTAEQIISHFEGRLADLVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTNVLRPGGTFIAKIFRGKDISLLYAQMKIFFPTVTCSKPRSSRNSSIEAFIVCQNYTPPPNYTPTMLNPLLDYSY----GEGNELTG---INRVIVPFIACGDLSGFDSDQTYALGNAEGEE-------YNVLDPVQMPIRPPYQT 278
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A3Q2T1E0_FUNHE (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2T1E0_FUNHE) HSP 1 Score: 243 bits (620), Expect = 5.170e-77 Identity = 126/200 (63.00%), Postives = 149/200 (74.50%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
QGDIT STA II HF G A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+DV LLYSQL + F VT AKPRSSR+SSIE+FVVC+ + P G+ P+M P+LDHSY N+ GP V+ VPF+ACGDLS FD+D++YPL+ E G+E +Q + P Q PIRPP+E
Sbjct: 99 QGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLRIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSYDV---DFNQLEGPNRVI---VPFLACGDLSAFDSDRTYPLQLETGKE-------YQYVPPTQPPIRPPYE 285
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A0L0HEN0_SPIPD (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HEN0_SPIPD) HSP 1 Score: 241 bits (615), Expect = 1.130e-76 Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 1
Query: 1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 648
V L + P QGDIT +STA+ I+ +F G LA+LVVCDGAPDVTGLHDMDEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D+ LLY+Q+ + F VT +KPRSSR+SSIE+F+VC+ + P G+ P+ML P+LD +Y NE G V ++VPFVACGDLSGFD+D++YPL + +G E +T L+P Q PIRPP+++
Sbjct: 77 VDLQAMAPLPGVIQLQGDITKRSTAEQIVSYFEGQLADLVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGKDISLLYAQMKVFFPVVTCSKPRSSRNSSIEAFIVCQDYTPPEGYIPTMLNPLLDLTYDEK----NELTG---VNRVIVPFVACGDLSGFDSDQTYPLPKGDGAEYST-------LEPVQAPIRPPYQT 278
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: UPI001CFD5BE7 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFD5BE7) HSP 1 Score: 243 bits (620), Expect = 1.360e-76 Identity = 125/200 (62.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
QGDIT STA II HF G A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNI HVL PGG+FVAKIFRGRDV LLYSQL + F V AKPRSSR+SSIE+F VCRGF P G+ PSML P+LDHSY G N+ GP V+ VPF+ACGDLS +D+D++YPL+ E GA +++ P Q PI PP++
Sbjct: 90 QGDITKASTAQEIIGHFEGEPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPEVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLNPLLDHSYH---GDFNQLEGPTRVI---VPFLACGDLSAYDSDRTYPLQLE-------GAHEYRYTPPAQPPISPPYQ 276
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: F6Q075_MONDO (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Monodelphis domestica TaxID=13616 RepID=F6Q075_MONDO) HSP 1 Score: 243 bits (619), Expect = 2.580e-76 Identity = 126/200 (63.00%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
QGDIT STA II HF G A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNI HVL PGG+FVAKIFRGRDV LLYSQL + F V AKPRSSR+SSIE+F VCRGF P G+ PSML P+LDHSY G N+ GPA V+ VPF+ACGDLS +D+D++YPL+ E G E ++ P Q PI PP++
Sbjct: 110 QGDITKASTAQEIIGHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPDVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLNPLLDHSYH---GDFNQLEGPARVI---VPFLACGDLSAYDSDRTYPLQLEGGSE-------YRYTPPTQPPISPPYQ 296
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A4Z2C911_9TELE (FtsJ domain-containing protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A4Z2C911_9TELE) HSP 1 Score: 238 bits (607), Expect = 3.380e-76 Identity = 124/200 (62.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
QGDIT STA II HF G A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL P GTFVAKIFRG+DV LLYSQL + F VT AKPRSSR+SSIE+FVVC+ + P GF P+M P+LDHSY+ N+ GP V+ VPF+ACGDLS FD+D++YPL+ E G ++ P Q PIRPP+E
Sbjct: 11 QGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPRGTFVAKIFRGKDVTLLYSQLKIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPTGFMPNMSNPLLDHSYNV---DFNQLEGPNRVI---VPFLACGDLSAFDSDRTYPLQLE-------GDQQYEYTPPTQPPIRPPYE 197
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A261Y7Q4_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y7Q4_9FUNG) HSP 1 Score: 239 bits (610), Expect = 1.030e-75 Identity = 121/216 (56.02%), Postives = 155/216 (71.76%), Query Frame = 1
Query: 1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 648
V L + P + QGDIT STA+ II +F G LA++VVCDGAPDVTGLHDMDEY+QAQLLLAALNIT HVL PGGTFVAKIFRGRD+ LLY+Q+ + F +VT KPRSSR+SSIE+F+VC+ + P G+ P+M P+LD Y+ + NE GP V+ +PF+ACGDLSGFD+D++YPL G + G ++ LDP Q PI P+++
Sbjct: 81 VDLQAMAPLEGVIQLQGDITKVSTAEQIISYFEGQLADIVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGRDISLLYAQMKIFFPKVTCCKPRSSRNSSIEAFIVCQNYAPPEGYVPNMSNPLLDLQYNDS----NELEGPNRVI---MPFIACGDLSGFDSDRTYPLNMS-GNRDSEGTKTYKSLDPVQAPISAPYKT 288
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A5N5SQ19_9CRUS (FtsJ domain-containing protein n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SQ19_9CRUS) HSP 1 Score: 239 bits (610), Expect = 1.060e-75 Identity = 122/200 (61.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
QGDIT KSTA+AII+HF+G A+LVV DGAPDVTGLHD+DEY+QAQLLLAALNIT H+L GGTFVAKIFRG+DV LLYSQL L F+ V + KPRSSR+SSIESFVVC+ + P G+EP+ML P+LDHSY + +G + ++VPFVACGDLS +D+DK+YPL E G++ ++ L P Q PI P +E
Sbjct: 80 QGDITKKSTAEAIIEHFQGEPAQLVVSDGAPDVTGLHDLDEYVQAQLLLAALNITTHILKRGGTFVAKIFRGKDVTLLYSQLKLFFKEVFVTKPRSSRNSSIESFVVCKNYSPPDGYEPTMLNPLLDHSYQ---DSFQDLVG---INRVIVPFVACGDLSAYDSDKTYPLELEGGKK-------YEYLPPTQPPISPAYE 266
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A6P3WG56_CLUHA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3WG56_CLUHA) HSP 1 Score: 240 bits (612), Expect = 1.530e-75 Identity = 123/200 (61.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
QGDIT STA+ II HF G A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL GGTFVAKIFRG+DV LLYSQL + F RVT AKPRSSR+SSIE+FVVCR + P G+ P+M P+LDHSY N+ GP ++VPF+ACGDLS FD+D++YPL+ + G+E + P Q PI PP+E
Sbjct: 93 QGDITKLSTAEEIIKHFEGQSADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKTGGTFVAKIFRGKDVTLLYSQLRIFFSRVTCAKPRSSRNSSIEAFVVCRNYSPPEGYVPNMSNPLLDHSYDV---DFNQLEGPN---RIIVPFLACGDLSAFDSDRTYPLQLDSGKE-------YTYTPPTQPPIHPPYE 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig58578.13346.1 >prot_H-elongata_contig58578.13346.1 ID=prot_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGback to top mRNA from alignment at H-elongata_contig58578:566..2278- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig58578.13346.1 ID=mRNA_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1713bp|location=Sequence derived from alignment at H-elongata_contig58578:566..2278- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig58578:566..2278- >mRNA_H-elongata_contig58578.13346.1 ID=mRNA_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig58578:566..2278- (Himanthalia elongata Himel1 dioecious)back to top |