mRNA_H-elongata_contig58578.13346.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig58578.13346.1
Unique NamemRNA_H-elongata_contig58578.13346.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: D7FXW8_ECTSI (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXW8_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 1.100e-100
Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLR--REEGEEG---ATGADDFQRLDPPQMPIRPPHES 648
            QGDITS  TA+AIIDHFRGGLAELVVCDGAPDVTGLHD+DEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRD  LLYSQL LLFERVTIAKPRSSRSSSIE+FVVCR +  P GFE SMLTP+LDH++S      NERLGPA   NL+VPFVACGDLSGFDADKSYPL   REEG++G    T    +QR+ P QMPIRPPHE+
Sbjct:  198 QGDITSVKTAEAIIDHFRGGLAELVVCDGAPDVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTIAKPRSSRSSSIEAFVVCRVYAPPEGFEASMLTPLLDHAHS----ATNERLGPA---NLIVPFVACGDLSGFDADKSYPLEEPREEGKDGDSQLTSQRGYQRIPPAQMPIRPPHET 396          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A507E4B4_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E4B4_9FUNG)

HSP 1 Score: 246 bits (629), Expect = 8.560e-79
Identity = 125/216 (57.87%), Postives = 157/216 (72.69%), Query Frame = 1
Query:    1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 648
            V L  + P       QGDIT  STA+ II HF G LA+LVVCDGAPDVTGLHDMDEY+QAQLLLAALNIT +VL PGGTF+AKIFRG+D+ LLY+Q+ + F  VT +KPRSSR+SSIE+F+VC+ +  P  + P+ML P+LD+SY    G  NE  G   +  ++VPF+ACGDLSGFD+D++Y L   EGEE       +  LDP QMPIRPP+++
Sbjct:   77 VDLQAMAPLPGVIQLQGDITKSSTAEQIISHFEGRLADLVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTNVLRPGGTFIAKIFRGKDISLLYAQMKIFFPTVTCSKPRSSRNSSIEAFIVCQNYTPPPNYTPTMLNPLLDYSY----GEGNELTG---INRVIVPFIACGDLSGFDSDQTYALGNAEGEE-------YNVLDPVQMPIRPPYQT 278          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A3Q2T1E0_FUNHE (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2T1E0_FUNHE)

HSP 1 Score: 243 bits (620), Expect = 5.170e-77
Identity = 126/200 (63.00%), Postives = 149/200 (74.50%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+DV LLYSQL + F  VT AKPRSSR+SSIE+FVVC+ +  P G+ P+M  P+LDHSY       N+  GP  V+   VPF+ACGDLS FD+D++YPL+ E G+E       +Q + P Q PIRPP+E
Sbjct:   99 QGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLRIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPEGYVPNMSNPLLDHSYDV---DFNQLEGPNRVI---VPFLACGDLSAFDSDRTYPLQLETGKE-------YQYVPPTQPPIRPPYE 285          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A0L0HEN0_SPIPD (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HEN0_SPIPD)

HSP 1 Score: 241 bits (615), Expect = 1.130e-76
Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 1
Query:    1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 648
            V L  + P       QGDIT +STA+ I+ +F G LA+LVVCDGAPDVTGLHDMDEY+QAQLLLAALNIT HVL PGGTFVAKIFRG+D+ LLY+Q+ + F  VT +KPRSSR+SSIE+F+VC+ +  P G+ P+ML P+LD +Y       NE  G   V  ++VPFVACGDLSGFD+D++YPL + +G E +T       L+P Q PIRPP+++
Sbjct:   77 VDLQAMAPLPGVIQLQGDITKRSTAEQIVSYFEGQLADLVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGKDISLLYAQMKVFFPVVTCSKPRSSRNSSIEAFIVCQDYTPPEGYIPTMLNPLLDLTYDEK----NELTG---VNRVIVPFVACGDLSGFDSDQTYPLPKGDGAEYST-------LEPVQAPIRPPYQT 278          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: UPI001CFD5BE7 (putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFD5BE7)

HSP 1 Score: 243 bits (620), Expect = 1.360e-76
Identity = 125/200 (62.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNI  HVL PGG+FVAKIFRGRDV LLYSQL + F  V  AKPRSSR+SSIE+F VCRGF  P G+ PSML P+LDHSY    G  N+  GP  V+   VPF+ACGDLS +D+D++YPL+ E       GA +++   P Q PI PP++
Sbjct:   90 QGDITKASTAQEIIGHFEGEPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPEVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLNPLLDHSYH---GDFNQLEGPTRVI---VPFLACGDLSAYDSDRTYPLQLE-------GAHEYRYTPPAQPPISPPYQ 276          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: F6Q075_MONDO (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Monodelphis domestica TaxID=13616 RepID=F6Q075_MONDO)

HSP 1 Score: 243 bits (619), Expect = 2.580e-76
Identity = 126/200 (63.00%), Postives = 147/200 (73.50%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNI  HVL PGG+FVAKIFRGRDV LLYSQL + F  V  AKPRSSR+SSIE+F VCRGF  P G+ PSML P+LDHSY    G  N+  GPA V+   VPF+ACGDLS +D+D++YPL+ E G E       ++   P Q PI PP++
Sbjct:  110 QGDITKASTAQEIIGHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPDVVCAKPRSSRNSSIEAFAVCRGFALPKGYVPSMLNPLLDHSYH---GDFNQLEGPARVI---VPFLACGDLSAYDSDRTYPLQLEGGSE-------YRYTPPTQPPISPPYQ 296          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A4Z2C911_9TELE (FtsJ domain-containing protein n=2 Tax=Takifugu TaxID=31032 RepID=A0A4Z2C911_9TELE)

HSP 1 Score: 238 bits (607), Expect = 3.380e-76
Identity = 124/200 (62.00%), Postives = 146/200 (73.00%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
            QGDIT  STA  II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL P GTFVAKIFRG+DV LLYSQL + F  VT AKPRSSR+SSIE+FVVC+ +  P GF P+M  P+LDHSY+      N+  GP  V+   VPF+ACGDLS FD+D++YPL+ E       G   ++   P Q PIRPP+E
Sbjct:   11 QGDITKVSTAQEIIRHFEGQPADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPRGTFVAKIFRGKDVTLLYSQLKIFFSSVTCAKPRSSRNSSIEAFVVCQNYSPPTGFMPNMSNPLLDHSYNV---DFNQLEGPNRVI---VPFLACGDLSAFDSDRTYPLQLE-------GDQQYEYTPPTQPPIRPPYE 197          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A261Y7Q4_9FUNG (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y7Q4_9FUNG)

HSP 1 Score: 239 bits (610), Expect = 1.030e-75
Identity = 121/216 (56.02%), Postives = 155/216 (71.76%), Query Frame = 1
Query:    1 VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHES 648
            V L  + P +     QGDIT  STA+ II +F G LA++VVCDGAPDVTGLHDMDEY+QAQLLLAALNIT HVL PGGTFVAKIFRGRD+ LLY+Q+ + F +VT  KPRSSR+SSIE+F+VC+ +  P G+ P+M  P+LD  Y+ +    NE  GP  V+   +PF+ACGDLSGFD+D++YPL    G   + G   ++ LDP Q PI  P+++
Sbjct:   81 VDLQAMAPLEGVIQLQGDITKVSTAEQIISYFEGQLADIVVCDGAPDVTGLHDMDEYIQAQLLLAALNITTHVLRPGGTFVAKIFRGRDISLLYAQMKIFFPKVTCCKPRSSRNSSIEAFIVCQNYAPPEGYVPNMSNPLLDLQYNDS----NELEGPNRVI---MPFIACGDLSGFDSDRTYPLNMS-GNRDSEGTKTYKSLDPVQAPISAPYKT 288          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A5N5SQ19_9CRUS (FtsJ domain-containing protein n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SQ19_9CRUS)

HSP 1 Score: 239 bits (610), Expect = 1.060e-75
Identity = 122/200 (61.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
            QGDIT KSTA+AII+HF+G  A+LVV DGAPDVTGLHD+DEY+QAQLLLAALNIT H+L  GGTFVAKIFRG+DV LLYSQL L F+ V + KPRSSR+SSIESFVVC+ +  P G+EP+ML P+LDHSY        + +G   +  ++VPFVACGDLS +D+DK+YPL  E G++       ++ L P Q PI P +E
Sbjct:   80 QGDITKKSTAEAIIEHFQGEPAQLVVSDGAPDVTGLHDLDEYVQAQLLLAALNITTHILKRGGTFVAKIFRGKDVTLLYSQLKLFFKEVFVTKPRSSRNSSIESFVVCKNYSPPDGYEPTMLNPLLDHSYQ---DSFQDLVG---INRVIVPFVACGDLSAYDSDKTYPLELEGGKK-------YEYLPPTQPPISPAYE 266          
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Match: A0A6P3WG56_CLUHA (Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase n=2 Tax=Clupeidae TaxID=55118 RepID=A0A6P3WG56_CLUHA)

HSP 1 Score: 240 bits (612), Expect = 1.530e-75
Identity = 123/200 (61.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query:   46 QGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTGLHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLLFERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPGGVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDFQRLDPPQMPIRPPHE 645
            QGDIT  STA+ II HF G  A+LVVCDGAPDVTGLHD+DEY+QAQLLLAALNIT HVL  GGTFVAKIFRG+DV LLYSQL + F RVT AKPRSSR+SSIE+FVVCR +  P G+ P+M  P+LDHSY       N+  GP     ++VPF+ACGDLS FD+D++YPL+ + G+E       +    P Q PI PP+E
Sbjct:   93 QGDITKLSTAEEIIKHFEGQSADLVVCDGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKTGGTFVAKIFRGKDVTLLYSQLRIFFSRVTCAKPRSSRNSSIEAFVVCRNYSPPEGYVPNMSNPLLDHSYDV---DFNQLEGPN---RIIVPFLACGDLSAFDSDRTYPLQLDSGKE-------YTYTPPTQPPIHPPYE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig58578.13346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW8_ECTSI1.100e-10078.16Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A507E4B4_9FUNG8.560e-7957.87Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A3Q2T1E0_FUNHE5.170e-7763.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A0L0HEN0_SPIPD1.130e-7657.41Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
UPI001CFD5BE71.360e-7662.50putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
F6Q075_MONDO2.580e-7663.00Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A4Z2C911_9TELE3.380e-7662.00FtsJ domain-containing protein n=2 Tax=Takifugu Ta... [more]
A0A261Y7Q4_9FUNG1.030e-7556.02Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]
A0A5N5SQ19_9CRUS1.060e-7561.00FtsJ domain-containing protein n=1 Tax=Armadillidi... [more]
A0A6P3WG56_CLUHA1.530e-7561.50Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-me... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig58578contigH-elongata_contig58578:566..2278 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score310.1
Seed ortholog evalue8.3e-82
Seed eggNOG ortholog2880.D7FXW8
KEGG koko:K02427,ko:K14820,ko:K14864
EggNOG free text desc.tRNA methyltransferase activity
EggNOG OGsCOG0293@1,KOG1099@2759
EC2.1.1.166,2.1.1.205
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-16_005130.1
Exons3
Model size648
Cds size648
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig58578.13346.1prot_H-elongata_contig58578.13346.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig58578 566..2278 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930949.624324-CDS-H-elongata_contig58578:565..7491622930949.624324-CDS-H-elongata_contig58578:565..749Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58578 566..749 -
1691679637.1652186-CDS-H-elongata_contig58578:565..7491691679637.1652186-CDS-H-elongata_contig58578:565..749Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58578 566..749 -
1622930949.6410623-CDS-H-elongata_contig58578:1533..18141622930949.6410623-CDS-H-elongata_contig58578:1533..1814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58578 1534..1814 -
1691679637.1796505-CDS-H-elongata_contig58578:1533..18141691679637.1796505-CDS-H-elongata_contig58578:1533..1814Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58578 1534..1814 -
1622930949.6614068-CDS-H-elongata_contig58578:2095..22781622930949.6614068-CDS-H-elongata_contig58578:2095..2278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58578 2096..2278 -
1691679637.1899016-CDS-H-elongata_contig58578:2095..22781691679637.1899016-CDS-H-elongata_contig58578:2095..2278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig58578 2096..2278 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig58578.13346.1

>prot_H-elongata_contig58578.13346.1 ID=prot_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp
VALVIVCPHDTECSWQGDITSKSTADAIIDHFRGGLAELVVCDGAPDVTG
LHDMDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDVGLLYSQLSLL
FERVTIAKPRSSRSSSIESFVVCRGFCAPAGFEPSMLTPMLDHSYSYAPG
GVNERLGPADVVNLVVPFVACGDLSGFDADKSYPLRREEGEEGATGADDF
QRLDPPQMPIRPPHES
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mRNA from alignment at H-elongata_contig58578:566..2278-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig58578.13346.1 ID=mRNA_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1713bp|location=Sequence derived from alignment at H-elongata_contig58578:566..2278- (Himanthalia elongata Himel1 dioecious)
GTAGCCCTCGTGATCGTTTGTCCCCATGACACTGAATGCTCGTGGCAGGG TGACATCACCTCGAAGAGCACTGCCGATGCAATCATCGACCACTTCCGAG GAGGGCTGGCTGAGCTCGTGGTTTGTGACGGTGCTCCCGATGTCACGGGA TTGCACGACATGGACGAGTATCTACAGGCTCAGGTGGGACTCCCCAGCCA ACGCGGCCTATCTTCCTAGGCGAATACTCATCAGATGTAGTGCTCATCGC CGCGGTCAGCAGTCTGCGTGCCCTAGTGCCATACGCCTCGTTTATACGTT AAATATCCTCGGTCATGACGATCTTTGCGACGTAAAATAACAAACCGAAG TAGCTGACACGATAGCTCCTCGCGCGCTCCCGCAAAAATAAATAAATAAT AATAATTTCTCCCGCCCGCGCTACTGCACTCCGTTTCACTCGCGGTGCGC CGGAAAAATCGCAGCTACTTCTGGCGGCCCTCAACATCACCGCCCATGTC TTGTCACCCGGGGGAACCTTTGTGGCAAAGATATTTCGCGGTCGGGATGT CGGCCTGCTGTACAGTCAGCTGAGCCTGCTGTTTGAGCGCGTCACGATCG CCAAGCCACGCAGCAGCCGCAGCAGCTCTATCGAGTCGTTCGTCGTGTGC CGCGGCTTCTGCGCCCCAGCCGGTTTCGAGCCCTCCATGCTCACGCCTAT GCTGGATCACAGCTACTCGTACGCGCCCGGAGGCGTGAATGAGCGGTGGG CCGAGGGGAAGGGGGGTGGAAACGTGTTCTGCTTGGAGATGTTATTATTC TACTGTATTTATTTTTCTTCTAGCTAATCGCTAATCGCTCGAGTGTTCGG ACGAGGATCATCTCCCCGCGTCCCGTCCCTTGGGTCACACTCTTGTTGTG GGTTGTGTTGGTAACGTATGCTTGCTGTGGGAAAATGTTTGGTCACACGA GAAAAGGTTGACGGCTCGGTTTCCCCCAAGTCGGTAGAGACATTGCCCTG GGTGTAAGCGACGCGAATATATTTCATATCTCACTGAATCTTGAATGTTG CGACTGACTGCAGCAGCAAACGACGCCTCGAGAAGACTGACGAAAACTGC ACACATCAAAAATATTTGACCCGCACAGAAGTAGAGTAGAGTATGAAACG AGACACTATTAATGTTATAGTTAGCCTCCTAGATCCTGTACATGCATGTC GTGTGAGACACACCGCTCACCCTATTGTAACTAATAATAAATAGTTCTCT TATCGTATATAGTAGTATATAATATAATATACTTGTATATGCTTGTAATA TATGTATATATATATATATATATATATGTAATGTAGAACATTGTAAGAAG CGACGCGCCACGAGGGTTGCTTGGAACTACTCCTACCCTACCCCTCCCTG AAGGAAGAATCGTCCCCTCCCCGAGTATAGTATAGTATAGTACCGCGTAC AGTATGTTGGAGAGTTCGAGAGGAGCTGACGGGCAAGCCATCATTTTCCA TTCCTTTCTTTGGCCCCTTTCGCCCACAGGCTGGGCCCCGCCGATGTTGT CAACCTTGTAGTGCCGTTCGTGGCGTGCGGAGACCTCAGCGGATTCGACG CCGACAAATCGTATCCGCTGCGAAGAGAGGAGGGAGAAGAAGGGGCGACG GGGGCTGATGACTTCCAACGCCTCGACCCGCCCCAGATGCCGATACGACC GCCACACGAGAGC
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Coding sequence (CDS) from alignment at H-elongata_contig58578:566..2278-

>mRNA_H-elongata_contig58578.13346.1 ID=mRNA_H-elongata_contig58578.13346.1|Name=mRNA_H-elongata_contig58578.13346.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig58578:566..2278- (Himanthalia elongata Himel1 dioecious)
GTAGCCCTCGTGATCGTTTGTCCCCATGACACTGAATGCTCGTGGCAGGG
TGACATCACCTCGAAGAGCACTGCCGATGCAATCATCGACCACTTCCGAG
GAGGGCTGGCTGAGCTCGTGGTTTGTGACGGTGCTCCCGATGTCACGGGA
TTGCACGACATGGACGAGTATCTACAGGCTCAGGTAGCCCTCGTGATCGT
TTGTCCCCATGACACTGAATGCTCGTGGCAGGGTGACATCACCTCGAAGA
GCACTGCCGATGCAATCATCGACCACTTCCGAGGAGGGCTGGCTGAGCTC
GTGGTTTGTGACGGTGCTCCCGATGTCACGGGATTGCACGACATGGACGA
GTATCTACAGGCTCAGCTACTTCTGGCGGCCCTCAACATCACCGCCCATG
TCTTGTCACCCGGGGGAACCTTTGTGGCAAAGATATTTCGCGGTCGGGAT
GTCGGCCTGCTGTACAGTCAGCTGAGCCTGCTGTTTGAGCGCGTCACGAT
CGCCAAGCCACGCAGCAGCCGCAGCAGCTCTATCGAGTCGTTCGTCGTGT
GCCGCGGCTTCTGCGCCCCAGCCGGTTTCGAGCCCTCCATGCTCACGCCT
ATGCTGGATCACAGCTACTCGTACGCGCCCGGAGGCGTGAATGAGCGCTA
CTTCTGGCGGCCCTCAACATCACCGCCCATGTCTTGTCACCCGGGGGAAC
CTTTGTGGCAAAGATATTTCGCGGTCGGGATGTCGGCCTGCTGTACAGTC
AGCTGAGCCTGCTGTTTGAGCGCGTCACGATCGCCAAGCCACGCAGCAGC
CGCAGCAGCTCTATCGAGTCGTTCGTCGTGTGCCGCGGCTTCTGCGCCCC
AGCCGGTTTCGAGCCCTCCATGCTCACGCCTATGCTGGATCACAGCTACT
CGTACGCGCCCGGAGGCGTGAATGAGCGGCTGGGCCCCGCCGATGTTGTC
AACCTTGTAGTGCCGTTCGTGGCGTGCGGAGACCTCAGCGGATTCGACGC
CGACAAATCGTATCCGCTGCGAAGAGAGGAGGGAGAAGAAGGGGCGACGG
GGGCTGATGACTTCCAACGCCTCGACCCGCCCCAGATGCCGATACGACCG
CCACACGAGAGCGCTGGGCCCCGCCGATGTTGTCAACCTTGTAGTGCCGT
TCGTGGCGTGCGGAGACCTCAGCGGATTCGACGCCGACAAATCGTATCCG
CTGCGAAGAGAGGAGGGAGAAGAAGGGGCGACGGGGGCTGATGACTTCCA
ACGCCTCGACCCGCCCCAGATGCCGATACGACCGCCACACGAGAGC
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