mRNA_H-elongata_contig57299.13196.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A6H5KNZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ6_9PHAE) HSP 1 Score: 312 bits (800), Expect = 3.050e-96 Identity = 199/385 (51.69%), Postives = 229/385 (59.48%), Query Frame = 1
Query: 1 ISQVADKVRMLFAGIASPGVPGAIRAYPIPYGG---------------------------ELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEIDAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLK-----TKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
+ QVAD V+MLFAGIA PG+PG IRAYPI G ELS FQEYGCLSLA+SCM LNHDGSLLFVGGEDGVLAMY VA+D AE+K R E DA+EYMEE+LVTK DI QS+Q++ LK AVDEL LNNEYQLR+KD+NY EK R++TDKFT+EV+ DRR Y +LLD +KNMELTYEE IAQL DQHA+ ER+ LE QH+NKI+ EINRYQAMVQEKE+L AAF N K LVEEDAD E ++K TK + KLA+EKEATL+LKGENGIMKKKF +LSK
Sbjct: 31 VLQVADTVKMLFAGIAQPGIPGGIRAYPIGQGASAGSGPAGXXXXXXXXXXXXXXXXXXXELSGNFQEYGCLSLAVSCMVLNHDGSLLFVGGEDGVLAMYCVAEDPKTAERKAR-----------------ERDAVEYMEEILVTKTDIKVQSKQMQGLKNAVDELMLNNEYQLRLKDMNYKEKTREITDKFTVEVEMDRRCYGELLDERKNMELTYEERIAQLQDQHAE-------ERTGLEAQHRNKINAEINRYQAMVQEKEELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXAAFDNLKNLVEEDADTETEYIKAILAQTKFMAKLAAEKEATLRLKGENGIMKKKFSRLSK 381
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: D7FKX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX6_ECTSI) HSP 1 Score: 276 bits (707), Expect = 2.650e-80 Identity = 178/353 (50.42%), Postives = 207/353 (58.64%), Query Frame = 1
Query: 1 ISQVADKVRMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEIDAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
+ QVADKV+MLFAGIA PG+PG IRAYPI G EYGCLSLA+SCM LNHDGSLLFVGGEDGVLAMY VA+D AE+K R E DA+EYMEE+LVTK DI QS+Q++ LK AVDEL LNNEYQLR+KD+NY EK R++TDKFT+EV+ DRR Y +LLD +KNMELTYEE IAQL DQHA+ ER+ LE QH+NKI+ EINRYQAM A T ++KTK + KLA+EKEATL+LKGENGIMKKKF +LSK
Sbjct: 582 VLQVADKVKMLFAGIAQPGMPGGIRAYPIGQG--------EYGCLSLAVSCMVLNHDGSLLFVGGEDGVLAMYCVAEDPKTAERKAR-----------------ERDAVEYMEEILVTKTDIKVQSKQMQGLKNAVDELMLNNEYQLRLKDMNYKEKTREITDKFTVEVEMDRRCYGELLDERKNMELTYEERIAQLQDQHAE-------ERTGLEAQHRNKINAEINRYQAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXT----------EYVKTKFMAKLAAEKEATLRLKGENGIMKKKFSRLSK 892
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: G5AB45_PHYSP (Uncharacterized protein n=23 Tax=Phytophthora TaxID=4783 RepID=G5AB45_PHYSP) HSP 1 Score: 176 bits (445), Expect = 3.720e-45 Identity = 125/361 (34.63%), Postives = 193/361 (53.46%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDA---TAAEKKERIYYI-------------YAHIHTNTHILAGEIDAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R+LF A P PGAIRA+ P GE +E + CLS ++ + ++ D LF GEDG + ++ V D T K+ + Y H H G + A + EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ YE L ++K ++E+ YEE I QL + H + + E ++ KI E+ RYQ ++ ++E W E Q LV H V V E++++++ ++ ++++ ++K+++ + VE D D E LKTK KL +E+EATL+ KGENGIMKKKF L K
Sbjct: 619 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRTTGKDGDISLSAASVGGGFAGGSYHHDGFGGH--GGSMAA--FSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEATYQQKIMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIEALKTKYEDKLQAEREATLRFKGENGIMKKKFSALQK 954
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A3F2RUX9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUX9_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.880e-45 Identity = 123/357 (34.45%), Postives = 192/357 (53.78%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADD------ATAAEKKERIYYIYAHIHTNTHILAGEIDAME------YMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R+LF A P PGAIRA+ P GE +E + C S I+ + L+ D LF GEDG + ++ V D ATA + + T++ + G + EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ YE L ++K ++E+ YEE I QL + H + + E ++ KI E+ RYQ ++ ++E S W E Q L+ H V V E++++++ ++ ++++ ++K+++ + VE D D E LK K KL +E+EATL+ KGENGIMKKKF L K
Sbjct: 881 RLLFGAGAEPDRPGAIRAFKFPLTGESAE----FQCSSGPITRLRLSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRATAKDGES----------TSSVSIGGGFXXXXXXGMAAFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEASYQQKIMKEVERYQEVLTQREAQSVHWKNE----------QQRLLTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIEVLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 1206
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A6G0QJM9_9STRA (Cilia-and flagella-associated protein 57 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QJM9_9STRA) HSP 1 Score: 174 bits (440), Expect = 9.260e-45 Identity = 123/358 (34.36%), Postives = 193/358 (53.91%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVAD-----------DATAAEKKERIYYIYAHIHTNTHI-LAGEIDAME-YMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R+LF A P PGAIRA+ P GE +E + CLS ++ + ++ D LF GEDG + ++ V D D + + +A + H L G +M + EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ YE L ++K ++E+ YEE I QL + H + + E ++ KI E+ RYQ ++ ++E W E Q LV H V V E++++++ ++ ++++ ++K+++ + VE D D E LK K KL +E+EATL+ KGENGIMKKKF L K
Sbjct: 149 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRTTGKDGEISLSAASVGGGFAGGSSYHHDGLGGHGGSMATFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAYQQKIMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 485
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: H3GPP5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPP5_PHYRM) HSP 1 Score: 174 bits (440), Expect = 1.730e-44 Identity = 124/363 (34.16%), Postives = 191/363 (52.62%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDA---TAAEKKERIYYIYAHIHTNTHILAGEIDAMEY---------------MEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R+LF A P PGAIRA+ P GE +E + CLS ++ + ++ D LF GEDG + ++ V D T + KE + + I G Y EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ YE L ++K ++E+ YEE I QL + H + + E ++ KI E+ RYQ ++ ++E W E Q LV H V V E++++++ ++ ++++ ++KE++ + + VE D D E LK K KL +E+EATL+ KGENGIMKKKF L K
Sbjct: 664 RLLFGAGAEPERPGAIRAFKFPLTGESTE----FQCLSGPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRSTGKEGDISLSVASVGSAAISGGFAGGSSYHHEGLGGHGGSMASFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAYQQKIMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKEELGREYRETVSQVEADVDEEIEALKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 1005
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: D0N9R4_PHYIT (WD domain-containing protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N9R4_PHYIT) HSP 1 Score: 173 bits (439), Expect = 2.310e-44 Identity = 124/363 (34.16%), Postives = 194/363 (53.44%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADD----------------ATAAEKKERIYYIYAHIHTNTHI-LAGEIDAM-EYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R+LF A P PGAIRA+ P GE +E + CLS I+ + ++ D LF GEDG + ++ V D + ++ I YA + H G +M + EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ YE L ++K ++E+ YEE I QL + H + + E + KI E+ +YQ ++ ++E S+ W E Q LV H V V E++++++ ++ +I++ ++K+++ + VE D D E LK K K+ +E+EATL+ KGENGIMKKKF L K
Sbjct: 589 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPITRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPSRNTGRDGDISLSASSVAAAAISGGYAGTSSYHHEGYGGHGGSMASFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAFQQKIMKEVEQYQEVLTQREAQSQHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRIQMEEEKDELGREYRETVAQVEADVDEEIEALKKKYEDKVQAEREATLRFKGENGIMKKKFSALQK 930
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A6A3I5X4_9STRA (Cilia-and flagella-associated protein 57 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I5X4_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.400e-43 Identity = 122/358 (34.08%), Postives = 192/358 (53.63%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVAD-----------DATAAEKKERIYYIYAHIHTNTHI-LAGEIDAME-YMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R+LF A P PGAIRA+ P GE +E + CLS ++ + ++ D LF GEDG + ++ V D D + + +A + H L G +M + EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ YE L ++K ++E+ YEE I QL + H + + E ++ K E+ RYQ ++ ++E W E Q LV H V V E++++++ ++ ++++ ++K+++ + VE D D E LK K KL +E+EATL+ KGENGIMKKKF L K
Sbjct: 453 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRTTGKDGEISLSAASVGGGFAGGSSYHHDGLGGHGGSMATFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAYQQKNMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 789
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A5D6XNB2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNB2_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.070e-42 Identity = 118/353 (33.43%), Postives = 188/353 (53.26%), Query Frame = 1
Query: 10 VADKVRMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEI--DAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKW-DEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
+A R+LF A P PGA+RA+ P GE E CLS + + L+ D + LF GEDG + ++ + D K A G A + EE+LVTK D+ ++ + ELK VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++ +E L ++K ++E+ +E+ + L ++H Q + + QH+ I E+ RYQ ++ ++E S +W E+AR LV H V V E++ +++ ++ +++L + +++T +A VE D D E + + KL +E+EATL+ KGENGIMKKKF L K
Sbjct: 655 LAGSQRVLFGATAEPERPGAVRAFKFPLTGESVE----VQCLSAPATRLRLSVDDAFLFAAGEDGAVCVFEIRDKEGRPRAKA------AXXXXXXXXXGGSEFHHAGHFSEEILVTKSDLEEKNALMAELKNKVDELMLHNEYQLRLKDMTYNESLKDLTEKFTHEIELEKNKFELLREDKNDLEMAFEDKLKALEERHL-----QRLQEAEAAFQHR--IMTEVERYQDVLAQREAQSARWRSEQAR-----------LVSTHARYVADVAEDFAQRLSEDRQLRVQLEDETDELTREYAETVAQVEADVDDEVAGARRRYEDKLQAEREATLRFKGENGIMKKKFAALQK 979
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A0P1AHD8_PLAHL (WD40/YVTN repeat-like-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHD8_PLAHL) HSP 1 Score: 157 bits (397), Expect = 8.570e-39 Identity = 117/357 (32.77%), Postives = 179/357 (50.14%), Query Frame = 1
Query: 25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVAD----------DATAAEKKERIYYIYAHIHTNTHILAGEIDA--MEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
R LF A PGAIRA+ +P G+ +E + CLS ++ + L+ D LF GEDG + ++ + D D A + A + + H G + + EEVLVTK D+ ++ + ELKT VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT +++ ++ YE L ++K ++E+ YEE I QL + + + + +A Q W E LV AH V +V E+++K++ ++ + ++ ++K + + VE D D E LK K KL +E+EATL+LKGENGIMKKKFL L K
Sbjct: 676 RFLFGAGAEADCPGAIRAFKVPLTGDSTE----FQCLSSPVTRLRLSFDDQFLFATGEDGAVCIFEIRDKEGRLRHTGMDGNLASMNGAVEGSIAGVPLHNHESNGRHGGSMILFSEEVLVTKSDLEEKNTLMLELKTKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHQIELEKSKYEILREDKNDIEMEYEEKIKQLEEHYLQQMQESXXXXXXXXXXXXXXXXXXXTQREAQCQH-------WKNE----------QNRLVIAHDNYVAEVTEDFEKRLNEDRQLRTQIEEEKRDLDREYYETVAQVEADVDEEIEALKKKYEDKLQAEREATLRLKGENGIMKKKFLALQK 1011 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig57299.13196.1 >prot_H-elongata_contig57299.13196.1 ID=prot_H-elongata_contig57299.13196.1|Name=mRNA_H-elongata_contig57299.13196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp MLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSback to top mRNA from alignment at H-elongata_contig57299:102..3596- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig57299.13196.1 ID=mRNA_H-elongata_contig57299.13196.1|Name=mRNA_H-elongata_contig57299.13196.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3495bp|location=Sequence derived from alignment at H-elongata_contig57299:102..3596- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig57299:102..3596- >mRNA_H-elongata_contig57299.13196.1 ID=mRNA_H-elongata_contig57299.13196.1|Name=mRNA_H-elongata_contig57299.13196.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at H-elongata_contig57299:102..3596- (Himanthalia elongata Himel1 dioecious)back to top |