mRNA_H-elongata_contig57299.13196.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig57299.13196.1
Unique NamemRNA_H-elongata_contig57299.13196.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A6H5KNZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ6_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 3.050e-96
Identity = 199/385 (51.69%), Postives = 229/385 (59.48%), Query Frame = 1
Query:    1 ISQVADKVRMLFAGIASPGVPGAIRAYPIPYGG---------------------------ELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEIDAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLK-----TKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            + QVAD V+MLFAGIA PG+PG IRAYPI  G                            ELS  FQEYGCLSLA+SCM LNHDGSLLFVGGEDGVLAMY VA+D   AE+K R                 E DA+EYMEE+LVTK DI  QS+Q++ LK AVDEL LNNEYQLR+KD+NY EK R++TDKFT+EV+ DRR Y +LLD +KNMELTYEE IAQL DQHA+       ER+ LE QH+NKI+ EINRYQAMVQEKE+L                                                          AAF N K LVEEDAD E  ++K     TK + KLA+EKEATL+LKGENGIMKKKF +LSK
Sbjct:   31 VLQVADTVKMLFAGIAQPGIPGGIRAYPIGQGASAGSGPAGXXXXXXXXXXXXXXXXXXXELSGNFQEYGCLSLAVSCMVLNHDGSLLFVGGEDGVLAMYCVAEDPKTAERKAR-----------------ERDAVEYMEEILVTKTDIKVQSKQMQGLKNAVDELMLNNEYQLRLKDMNYKEKTREITDKFTVEVEMDRRCYGELLDERKNMELTYEERIAQLQDQHAE-------ERTGLEAQHRNKINAEINRYQAMVQEKEELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXAAFDNLKNLVEEDADTETEYIKAILAQTKFMAKLAAEKEATLRLKGENGIMKKKFSRLSK 381          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: D7FKX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKX6_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 2.650e-80
Identity = 178/353 (50.42%), Postives = 207/353 (58.64%), Query Frame = 1
Query:    1 ISQVADKVRMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEIDAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            + QVADKV+MLFAGIA PG+PG IRAYPI  G        EYGCLSLA+SCM LNHDGSLLFVGGEDGVLAMY VA+D   AE+K R                 E DA+EYMEE+LVTK DI  QS+Q++ LK AVDEL LNNEYQLR+KD+NY EK R++TDKFT+EV+ DRR Y +LLD +KNMELTYEE IAQL DQHA+       ER+ LE QH+NKI+ EINRYQAM                                                                    A   T           ++KTK + KLA+EKEATL+LKGENGIMKKKF +LSK
Sbjct:  582 VLQVADKVKMLFAGIAQPGMPGGIRAYPIGQG--------EYGCLSLAVSCMVLNHDGSLLFVGGEDGVLAMYCVAEDPKTAERKAR-----------------ERDAVEYMEEILVTKTDIKVQSKQMQGLKNAVDELMLNNEYQLRLKDMNYKEKTREITDKFTVEVEMDRRCYGELLDERKNMELTYEERIAQLQDQHAE-------ERTGLEAQHRNKINAEINRYQAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXT----------EYVKTKFMAKLAAEKEATLRLKGENGIMKKKFSRLSK 892          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: G5AB45_PHYSP (Uncharacterized protein n=23 Tax=Phytophthora TaxID=4783 RepID=G5AB45_PHYSP)

HSP 1 Score: 176 bits (445), Expect = 3.720e-45
Identity = 125/361 (34.63%), Postives = 193/361 (53.46%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDA---TAAEKKERIYYI-------------YAHIHTNTHILAGEIDAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R+LF   A P  PGAIRA+  P  GE +E    + CLS  ++ + ++ D   LF  GEDG + ++ V D     T    K+    +             Y H     H   G + A  + EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  YE L ++K ++E+ YEE I QL + H +       +    E  ++ KI  E+ RYQ ++ ++E     W  E           Q LV  H   V  V E++++++  ++  ++++ ++K+++   +      VE D D E   LKTK   KL +E+EATL+ KGENGIMKKKF  L K
Sbjct:  619 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRTTGKDGDISLSAASVGGGFAGGSYHHDGFGGH--GGSMAA--FSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEATYQQKIMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIEALKTKYEDKLQAEREATLRFKGENGIMKKKFSALQK 954          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A3F2RUX9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUX9_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.880e-45
Identity = 123/357 (34.45%), Postives = 192/357 (53.78%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADD------ATAAEKKERIYYIYAHIHTNTHILAGEIDAME------YMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R+LF   A P  PGAIRA+  P  GE +E    + C S  I+ + L+ D   LF  GEDG + ++ V D       ATA + +           T++  + G            + EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  YE L ++K ++E+ YEE I QL + H +       +    E  ++ KI  E+ RYQ ++ ++E  S  W  E           Q L+  H   V  V E++++++  ++  ++++ ++K+++   +      VE D D E   LK K   KL +E+EATL+ KGENGIMKKKF  L K
Sbjct:  881 RLLFGAGAEPDRPGAIRAFKFPLTGESAE----FQCSSGPITRLRLSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRATAKDGES----------TSSVSIGGGFXXXXXXGMAAFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEASYQQKIMKEVERYQEVLTQREAQSVHWKNE----------QQRLLTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIEVLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 1206          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A6G0QJM9_9STRA (Cilia-and flagella-associated protein 57 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QJM9_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.260e-45
Identity = 123/358 (34.36%), Postives = 193/358 (53.91%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVAD-----------DATAAEKKERIYYIYAHIHTNTHI-LAGEIDAME-YMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R+LF   A P  PGAIRA+  P  GE +E    + CLS  ++ + ++ D   LF  GEDG + ++ V D           D   +     +   +A   +  H  L G   +M  + EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  YE L ++K ++E+ YEE I QL + H +       +    E  ++ KI  E+ RYQ ++ ++E     W  E           Q LV  H   V  V E++++++  ++  ++++ ++K+++   +      VE D D E   LK K   KL +E+EATL+ KGENGIMKKKF  L K
Sbjct:  149 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRTTGKDGEISLSAASVGGGFAGGSSYHHDGLGGHGGSMATFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAYQQKIMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 485          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: H3GPP5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPP5_PHYRM)

HSP 1 Score: 174 bits (440), Expect = 1.730e-44
Identity = 124/363 (34.16%), Postives = 191/363 (52.62%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDA---TAAEKKERIYYIYAHIHTNTHILAGEIDAMEY---------------MEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R+LF   A P  PGAIRA+  P  GE +E    + CLS  ++ + ++ D   LF  GEDG + ++ V D     T +  KE    +      +  I  G      Y                EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  YE L ++K ++E+ YEE I QL + H +       +    E  ++ KI  E+ RYQ ++ ++E     W  E           Q LV  H   V  V E++++++  ++  ++++ ++KE++   +    + VE D D E   LK K   KL +E+EATL+ KGENGIMKKKF  L K
Sbjct:  664 RLLFGAGAEPERPGAIRAFKFPLTGESTE----FQCLSGPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRSTGKEGDISLSVASVGSAAISGGFAGGSSYHHEGLGGHGGSMASFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAYQQKIMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKEELGREYRETVSQVEADVDEEIEALKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 1005          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: D0N9R4_PHYIT (WD domain-containing protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N9R4_PHYIT)

HSP 1 Score: 173 bits (439), Expect = 2.310e-44
Identity = 124/363 (34.16%), Postives = 194/363 (53.44%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADD----------------ATAAEKKERIYYIYAHIHTNTHI-LAGEIDAM-EYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R+LF   A P  PGAIRA+  P  GE +E    + CLS  I+ + ++ D   LF  GEDG + ++ V D                 + ++     I   YA   +  H    G   +M  + EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  YE L ++K ++E+ YEE I QL + H +       +    E   + KI  E+ +YQ ++ ++E  S+ W  E           Q LV  H   V  V E++++++  ++  +I++ ++K+++   +      VE D D E   LK K   K+ +E+EATL+ KGENGIMKKKF  L K
Sbjct:  589 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPITRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPSRNTGRDGDISLSASSVAAAAISGGYAGTSSYHHEGYGGHGGSMASFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAFQQKIMKEVEQYQEVLTQREAQSQHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRIQMEEEKDELGREYRETVAQVEADVDEEIEALKKKYEDKVQAEREATLRFKGENGIMKKKFSALQK 930          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A6A3I5X4_9STRA (Cilia-and flagella-associated protein 57 n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I5X4_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.400e-43
Identity = 122/358 (34.08%), Postives = 192/358 (53.63%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVAD-----------DATAAEKKERIYYIYAHIHTNTHI-LAGEIDAME-YMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R+LF   A P  PGAIRA+  P  GE +E    + CLS  ++ + ++ D   LF  GEDG + ++ V D           D   +     +   +A   +  H  L G   +M  + EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  YE L ++K ++E+ YEE I QL + H +       +    E  ++ K   E+ RYQ ++ ++E     W  E           Q LV  H   V  V E++++++  ++  ++++ ++K+++   +      VE D D E   LK K   KL +E+EATL+ KGENGIMKKKF  L K
Sbjct:  453 RLLFGAGAEPDRPGAIRAFKFPLTGESTE----FQCLSAPVTRLRVSFDDQFLFAAGEDGAVCIFEVRDKEGRPTRTTGKDGEISLSAASVGGGFAGGSSYHHDGLGGHGGSMATFSEEILVTKSDLEEKNTLMLELKNKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHEIELEKNKYELLREDKNDIEMEYEEKIKQLEEHHLQ-------QMQETEAAYQQKNMKEVERYQEVLTQREAQCLHWKSE----------QQRLVTTHDKYVADVTEDFEQRLNEDRQLRMQMEEEKDELGREYRETVAQVEADVDEEIETLKKKYEDKLQAEREATLRFKGENGIMKKKFSALQK 789          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A5D6XNB2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNB2_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.070e-42
Identity = 118/353 (33.43%), Postives = 188/353 (53.26%), Query Frame = 1
Query:   10 VADKVRMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEI--DAMEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKW-DEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            +A   R+LF   A P  PGA+RA+  P  GE  E      CLS   + + L+ D + LF  GEDG + ++ + D       K       A          G     A  + EE+LVTK D+  ++  + ELK  VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT E++ ++  +E L ++K ++E+ +E+ +  L ++H      Q  + +    QH+  I  E+ RYQ ++ ++E  S +W  E+AR           LV  H   V  V E++ +++  ++  +++L  + +++T  +A     VE D D E    + +   KL +E+EATL+ KGENGIMKKKF  L K
Sbjct:  655 LAGSQRVLFGATAEPERPGAVRAFKFPLTGESVE----VQCLSAPATRLRLSVDDAFLFAAGEDGAVCVFEIRDKEGRPRAKA------AXXXXXXXXXGGSEFHHAGHFSEEILVTKSDLEEKNALMAELKNKVDELMLHNEYQLRLKDMTYNESLKDLTEKFTHEIELEKNKFELLREDKNDLEMAFEDKLKALEERHL-----QRLQEAEAAFQHR--IMTEVERYQDVLAQREAQSARWRSEQAR-----------LVSTHARYVADVAEDFAQRLSEDRQLRVQLEDETDELTREYAETVAQVEADVDDEVAGARRRYEDKLQAEREATLRFKGENGIMKKKFAALQK 979          
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Match: A0A0P1AHD8_PLAHL (WD40/YVTN repeat-like-containing domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHD8_PLAHL)

HSP 1 Score: 157 bits (397), Expect = 8.570e-39
Identity = 117/357 (32.77%), Postives = 179/357 (50.14%), Query Frame = 1
Query:   25 RMLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGSLLFVGGEDGVLAMYYVAD----------DATAAEKKERIYYIYAHIHTNTHILAGEIDA--MEYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIRDLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQAAERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*RHTILAINQNLVDAHTAAVQKVIEEYDKKVEGEQSEQIELTQQKEKMTAAFANRKTLVEEDADAEATFLKTKLITKLASEKEATLKLKGENGIMKKKFLQLSK 1059
            R LF   A    PGAIRA+ +P  G+ +E    + CLS  ++ + L+ D   LF  GEDG + ++ + D          D   A     +    A +  + H   G      + + EEVLVTK D+  ++  + ELKT VDEL L+NEYQLR+KD+ Y+E ++DLT+KFT +++ ++  YE L ++K ++E+ YEE I QL + + +                         + +A  Q        W  E             LV AH   V +V E+++K++  ++  + ++ ++K  +   +      VE D D E   LK K   KL +E+EATL+LKGENGIMKKKFL L K
Sbjct:  676 RFLFGAGAEADCPGAIRAFKVPLTGDSTE----FQCLSSPVTRLRLSFDDQFLFATGEDGAVCIFEIRDKEGRLRHTGMDGNLASMNGAVEGSIAGVPLHNHESNGRHGGSMILFSEEVLVTKSDLEEKNTLMLELKTKVDELMLHNEYQLRLKDMTYNENLKDLTEKFTHQIELEKSKYEILREDKNDIEMEYEEKIKQLEEHYLQQMQESXXXXXXXXXXXXXXXXXXXTQREAQCQH-------WKNE----------QNRLVIAHDNYVAEVTEDFEKRLNEDRQLRTQIEEEKRDLDREYYETVAQVEADVDEEIEALKKKYEDKLQAEREATLRLKGENGIMKKKFLALQK 1011          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57299.13196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNZ6_9PHAE3.050e-9651.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKX6_ECTSI2.650e-8050.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
G5AB45_PHYSP3.720e-4534.63Uncharacterized protein n=23 Tax=Phytophthora TaxI... [more]
A0A3F2RUX9_9STRA3.880e-4534.45Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A6G0QJM9_9STRA9.260e-4534.36Cilia-and flagella-associated protein 57 n=1 Tax=P... [more]
H3GPP5_PHYRM1.730e-4434.16Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
D0N9R4_PHYIT2.310e-4434.16WD domain-containing protein, putative n=1 Tax=Phy... [more]
A0A6A3I5X4_9STRA1.400e-4334.08Cilia-and flagella-associated protein 57 n=2 Tax=P... [more]
A0A5D6XNB2_9STRA3.070e-4233.43Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A0P1AHD8_PLAHL8.570e-3932.77WD40/YVTN repeat-like-containing domain n=1 Tax=Pl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57299contigH-elongata_contig57299:102..3596 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score259.6
Seed ortholog evalue1.4e-66
Seed eggNOG ortholog2880.D7FKX6
Preferred nameWDR65
GOsGO:0003008,GO:0007600,GO:0007605,GO:0008150,GO:0032501,GO:0050877,GO:0050954
EggNOG free text desc.WD40 repeats
EggNOG OGs28M22@1,2QTIS@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-17_001740.1
Exons8
Model size1059
Cds size723
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57299.13196.1prot_H-elongata_contig57299.13196.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig57299 1617..3569 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930931.7653167-UTR-H-elongata_contig57299:101..2001622930931.7653167-UTR-H-elongata_contig57299:101..200Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 102..200 -
1691679629.8874884-UTR-H-elongata_contig57299:101..2001691679629.8874884-UTR-H-elongata_contig57299:101..200Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 102..200 -
1622930931.8108778-UTR-H-elongata_contig57299:774..8971622930931.8108778-UTR-H-elongata_contig57299:774..897Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 775..897 -
1691679629.8973033-UTR-H-elongata_contig57299:774..8971691679629.8973033-UTR-H-elongata_contig57299:774..897Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 775..897 -
1622930931.8285801-UTR-H-elongata_contig57299:1131..11971622930931.8285801-UTR-H-elongata_contig57299:1131..1197Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 1132..1197 -
1691679629.905441-UTR-H-elongata_contig57299:1131..11971691679629.905441-UTR-H-elongata_contig57299:1131..1197Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 1132..1197 -
1622930931.8599608-UTR-H-elongata_contig57299:1595..16161622930931.8599608-UTR-H-elongata_contig57299:1595..1616Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 1596..1616 -
1691679629.9136066-UTR-H-elongata_contig57299:1595..16161691679629.9136066-UTR-H-elongata_contig57299:1595..1616Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 1596..1616 -
1622930931.9693313-UTR-H-elongata_contig57299:3569..35961622930931.9693313-UTR-H-elongata_contig57299:3569..3596Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 3570..3596 -
1691679629.9714487-UTR-H-elongata_contig57299:3569..35961691679629.9714487-UTR-H-elongata_contig57299:3569..3596Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig57299 3570..3596 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930931.8827436-CDS-H-elongata_contig57299:1616..17361622930931.8827436-CDS-H-elongata_contig57299:1616..1736Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 1617..1736 -
1691679629.9229405-CDS-H-elongata_contig57299:1616..17361691679629.9229405-CDS-H-elongata_contig57299:1616..1736Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 1617..1736 -
1622930931.89818-CDS-H-elongata_contig57299:2058..22171622930931.89818-CDS-H-elongata_contig57299:2058..2217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 2059..2217 -
1691679629.9310799-CDS-H-elongata_contig57299:2058..22171691679629.9310799-CDS-H-elongata_contig57299:2058..2217Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 2059..2217 -
1622930931.9149163-CDS-H-elongata_contig57299:2797..29621622930931.9149163-CDS-H-elongata_contig57299:2797..2962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 2798..2962 -
1691679629.940354-CDS-H-elongata_contig57299:2797..29621691679629.940354-CDS-H-elongata_contig57299:2797..2962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 2798..2962 -
1622930931.9330711-CDS-H-elongata_contig57299:3218..34361622930931.9330711-CDS-H-elongata_contig57299:3218..3436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 3219..3436 -
1691679629.9517014-CDS-H-elongata_contig57299:3218..34361691679629.9517014-CDS-H-elongata_contig57299:3218..3436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 3219..3436 -
1622930931.9528415-CDS-H-elongata_contig57299:3508..35691622930931.9528415-CDS-H-elongata_contig57299:3508..3569Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 3509..3569 -
1691679629.96368-CDS-H-elongata_contig57299:3508..35691691679629.96368-CDS-H-elongata_contig57299:3508..3569Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57299 3509..3569 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig57299.13196.1

>prot_H-elongata_contig57299.13196.1 ID=prot_H-elongata_contig57299.13196.1|Name=mRNA_H-elongata_contig57299.13196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp
MLFAGIASPGVPGAIRAYPIPYGGELSEKFQEYGCLSLAISCMTLNHDGS
LLFVGGEDGVLAMYYVADDATAAEKKERIYYIYAHIHTNTHILAGEIDAM
EYMEEVLVTKIDINAQSRQVEELKTAVDELTLNNEYQLRIKDINYSEKIR
DLTDKFTLEVDTDRRIYEDLLDNKKNMELTYEEAIAQLHDQHAKACSPQA
AERSTLETQHKNKISIEINRYQAMVQEKEDLSRKWDEEAR*
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mRNA from alignment at H-elongata_contig57299:102..3596-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig57299.13196.1 ID=mRNA_H-elongata_contig57299.13196.1|Name=mRNA_H-elongata_contig57299.13196.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3495bp|location=Sequence derived from alignment at H-elongata_contig57299:102..3596- (Himanthalia elongata Himel1 dioecious)
ATCTCGCAGGTAGCTGACAAGGTGCGAATGCTGTTCGCAGGCATTGCGTC GCCGGGAGTTCCCGGAGCAATTCGAGCGTATCCTATCCGTAAAGGGACAA CCGCCGATTCTAGCGCTGCAAGGGGCGGAGCAGGAGGGGCAAACGATGGA CCGATCGCAGCATACGGGGGCGAGCTGAGCGAGAAATTCCAGGAGTACGG GTGCTTGTCGCTGGCGATTTCTTGCATGACCTTAAACCATGACGGTAGTC TTCTGTTCGTTGGGGGGGAGGATGGAGTGCTGGCCATGTACTACGTTGCG GACGATGCAACTGCTGCGGAGAAGAAGGAAAGGATATATTATATATATGC ACATATACACACAAACACACATATATTGGTATGTACTGGATATATATCCC GTTGTATCAGGTGAAGGACTGGAGACAGAGGTGGGGAAGAAGAAGGGTTA GGGTTATCTATCCAGGGCATAACGACCATCTGCGCTTTGGGATGTGTACC GTTGCCAGCACTCTCGCTGTTGTCGTGGATATATCACCTCCTGACACTCT GTAAGATGCGGCCGTATTTCTCTCTGCGAGAGTGTAACGGGTGATGTCTG TTCTTGTGGTACTGCTGCTCCTGTTTGTTAGCAGGCTGGAGAAATAGACG CAATGGAGTACATGGAGGAGGTTCTGGTCACGAAGATCGACATCAACGCC CAGTCGAGGCAAGTGGAGGAGCTTAAGACCGCCGTTGACGAACTTACGCT CAACAACGAGTATCAGCTCCGTATCAAGGACATTAACTACAGCGAAAAGG TGGGGTGGTGTATGCGAGGAACTCTCTTACCGAGTCTCACAACGCCAGAG TGGAAACTATTGCTAATTCCCAAGGTACCTGCGTATCGAGATGCTGAGAA AAGTTGCAAAATGCACTGACTTAACGCCCCTCTGCTCAAACATTGTTGTG ACGCTGAGATCCTGCGTCAGAGGGGATGAATGTTGGAGCATATTCGACTC TATCCATGAGTTGATTTAGCATTTTCCCACTAGGCGTCATTGACAATAAT ACTAACCTAGCACAGTAATATCATAAGCTCACTATTGCGTGTGAAACCAC GCGGCGCGCGCCATACTTTCTCAGCAAAGCGATAATCCAAACGCATTATT ACCTAATGGGGATATGGGGGTACGATGGTGTCATCATTGTTTTACGCATG ATCCTTAGAGAGCCATCCCCCATCCTTCGTGTGTGTTTATTTTGGAAAAG CATTAGAGCTACGCCATGGATCTGTAATTCTCATAAAACGCTTACGACGC CACCGTTAGAGTAAAATGAGGCCCACTGGGGTGCTATCGCTCTCCCTGCA AAATATGACATCGTGCGAACGGAATCAAGATTCGGGACCTTACGGACAAA TTCACACTGGAGGTGGACACAGATCGACGGATCTACGAAGATCTCCTGGA CAACAAGAAAAACATGGAGCTCACCTACGAAGAGGCGATTGCGCAGCTGC ACGATCAGCATGCCAAGGCATGTTCACCACAAGCAGCGGTGTCACATCGA TTCTTTTCCGGTTTTGAAAAAGTTCTCGACATAAAGGAATCTTGCTGAAT TTCGTTGAAGAAATAGTTTTCGTCGAGTAAAAGACGGGGAGATATTATGT GCATGACTTTCCGCGCCCTCCCAGTTTCTTGTAGCCCATGCGCAATCGAC CGTCATACATCAACCATTCATTGAGCTCCCTTGCTTTATTTTTTGCGAAG GGCATTATATGGAGTTTCCGAATAGACTTCGCCGACATCACTATGTGACG GCCATATTTTGCGAAGTTATGTAGTCGCGTCTACCTCGTGTAATTATATT GTCATACCAGGAGCGGTCCACGCTGGAGACTCAGCACAAGAACAAGATAA GCATCGAGATCAACCGTTACCAGGCCATGGTCCAGGAGAAGGAAGATCTC AGCAGGAAATGGGACGAGGAGGCAAGATAGAGGCACACGATATTAGCTAT AGTAGTGAGCTATCGAAGAATATGCAAACGTTTTCTTGAAGCTCATAGTT CCGCCGGACAGCACAGCAGAATGCCGCATAATAACAAGGTTTTTGTTGGT GCTATAGCGATCTGGGAGATCTGGGAGTCAGAGCGTTTCTCACAATATTT ATATCTTGGTGTTTCTGGGGTATAGCGAGTCTTAGTATCCGTGAGGTCTT GCTGGGAGCAGCAGCCTAGGGGTTTCTGATACACAAAAGCCAACAACGAT CGATTGAAGCTCTTTACATGCTGTCGTCCTGATCATCGCGAATCGTCTTA TCGGCCACTGTATGTCCCTGCCCCGTCTTTTATTTATATTTTCCAACTGT GTGATGAACACAATGTTGCCGTGATTTCGAACTTTAAAATCCTCCATAGA ACCAGAACCTCGTGGACGCTCACACAGCAGCCGTGCAAAAGGTCATTGAA GAGTACGACAAGAAGGTGGGATGCGTAGGATAAATGAGACAAAATGACAC CGTACAACGTGTAGGTCCGCTAAAAAACTCCTCCAAACAATAGGCTGCAT TATATTACGCGAAAGAGTCTGTGATACTCACCAAAACTTCTGGATGCGGT GGATGGGACCCCGCGCGTTATCTAGCCGCACCCTCAGACATCGCTGCTGC TGACGTTTAGTAATGCTTGGTAACTCCAATGTAAATGCGCGATCTTCAGG TGGAGGGTGAGCAGTCCGAGCAAATAGAACTGACACAGCAAAAAGAAAAG ATGACCGCCGCATTCGCTAACCGGAAGACGCTCGTCGAGGAGGATGCCGA TGCTGAAGCGACGTTTTTGAAGGTATATACATACACAATACCGTAAAATA TGGGGTGGCGGTACAATATGGTATCAAGTCGTTTTCGGAGATAACAGGTA ACAATCGTTGAGGTAGATTATTGTGTGGAATGGAAAGGCATACTGCGCTG AAAATGACTGGACAAGCGGAATTATCCAGAGTGAGGGTCAAGAACGAACG ATTGAGCGCCATTGCTTCCCCTAAAGCAATTCCGAGTGTGTTGTGTTGGC AGTGAAAGCCTGTTTTGCTAGACATTAGTTTTCTCCAGCTGTGCGATGGC CAATAACTTGAACGGTGACGATCAGATATATACAAGTCTAGCGCTGGCAC AGCAGAGCGAAACAAAGCACATTTTTCAAGGAGAGCATGAGATTTCCTTG AACGTCCAAAACTCAGACTTTGGGGGAGACCATCAAACGACTGCCTGGCG CTCGATTGTGGACTGGTGTGAAAATGGTGTATATCATTATACAAGTGCTG CTTTATTCGGTGAATAATATTAACATCATGCGATGGTACACGTCCACTCG GTGCTCACGTTCACTGTGGTATGTGGGTATGGCGCACAACGTAAAGACGA AATTAATTACCAAGCTCGCGTCAGAAAAGGAGGCGACGCTGAAGCTCAAG GGAGAAAATGGCATCATGAAGAAGAAATTCTTGCAGCTCAGCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig57299:102..3596-

>mRNA_H-elongata_contig57299.13196.1 ID=mRNA_H-elongata_contig57299.13196.1|Name=mRNA_H-elongata_contig57299.13196.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at H-elongata_contig57299:102..3596- (Himanthalia elongata Himel1 dioecious)
ATGCTGTTCGCAGGCATTGCGTCGCCGGGAGTTCCCGGAGCAATTCGAGC
GTATCCTATCCATGCTGTTCGCAGGCATTGCGTCGCCGGGAGTTCCCGGA
GCAATTCGAGCGTATCCTATCCCATACGGGGGCGAGCTGAGCGAGAAATT
CCAGGAGTACGGGTGCTTGTCGCTGGCGATTTCTTGCATGACCTTAAACC
ATGACGGTAGTCTTCTGTTCGTTGGGGGGGAGGATGGAGTGCTGGCCATG
TACTACGTTGCGGACGATGCAACTGCTGCGGAGAAGAAGGAAAGGATATA
TTATATATATGCACATATACACACAAACACACATATATTGCATACGGGGG
CGAGCTGAGCGAGAAATTCCAGGAGTACGGGTGCTTGTCGCTGGCGATTT
CTTGCATGACCTTAAACCATGACGGTAGTCTTCTGTTCGTTGGGGGGGAG
GATGGAGTGCTGGCCATGTACTACGTTGCGGACGATGCAACTGCTGCGGA
GAAGAAGGAAAGGATATATTATATATATGCACATATACACACAAACACAC
ATATATTGGCTGGAGAAATAGACGCAATGGAGTACATGGAGGAGGTTCTG
GTCACGAAGATCGACATCAACGCCCAGTCGAGGCAAGTGGAGGAGCTTAA
GACCGCCGTTGACGAACTTACGCTCAACAACGAGTATCAGCTCCGTATCA
AGGACATTAACTACAGCGAAAAGGCTGGAGAAATAGACGCAATGGAGTAC
ATGGAGGAGGTTCTGGTCACGAAGATCGACATCAACGCCCAGTCGAGGCA
AGTGGAGGAGCTTAAGACCGCCGTTGACGAACTTACGCTCAACAACGAGT
ATCAGCTCCGTATCAAGGACATTAACTACAGCGAAAAGATTCGGGACCTT
ACGGACAAATTCACACTGGAGGTGGACACAGATCGACGGATCTACGAAGA
TCTCCTGGACAACAAGAAAAACATGGAGCTCACCTACGAAGAGGCGATTG
CGCAGCTGCACGATCAGCATGCCAAGGCATGTTCACCACAAGCAGCGATT
CGGGACCTTACGGACAAATTCACACTGGAGGTGGACACAGATCGACGGAT
CTACGAAGATCTCCTGGACAACAAGAAAAACATGGAGCTCACCTACGAAG
AGGCGATTGCGCAGCTGCACGATCAGCATGCCAAGGCATGTTCACCACAA
GCAGCGGAGCGGTCCACGCTGGAGACTCAGCACAAGAACAAGATAAGCAT
CGAGATCAACCGTTACCAGGCCATGGTCCAGGAGAAGGAAGATCTCAGCA
GGAAATGGGACGAGGAGGCAAGATAGGAGCGGTCCACGCTGGAGACTCAG
CACAAGAACAAGATAAGCATCGAGATCAACCGTTACCAGGCCATGGTCCA
GGAGAAGGAAGATCTCAGCAGGAAATGGGACGAGGAGGCAAGATAG
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