mRNA_H-elongata_contig57238.13187.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig57238.13187.1
Unique NamemRNA_H-elongata_contig57238.13187.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A6I8SNZ1_XENTR (ATP-dependent DNA helicase n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8SNZ1_XENTR)

HSP 1 Score: 140 bits (352), Expect = 4.930e-35
Identity = 80/196 (40.82%), Postives = 115/196 (58.67%), Query Frame = 1
Query:    1 LLDHQPQRTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMIDGTKLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            LL+ + QR + DS    S  GG    NW ++D  WSQ + D L ++F ++S+RS Q + +NAT++ RDVF++M TGGGKSLCYQLPA      T+V+ PL+SL+EDQ   L+ L   G          +K  +  V+ E   +  ++     +LL+ T   + KSK+FM  L+K  + G LA+V V E HCCSQ G
Sbjct:   43 LLNKKIQRLSEDSGPGTSAGGGDSAENWQKEDFLWSQKIRDALCNSFQLRSFRSLQLETINATMAGRDVFLIMPTGGGKSLCYQLPAVCSDGFTLVICPLVSLMEDQLMVLDRL---GVSATSLNASSSKEHVKWVHGEMTNKNSRL-----KLLYVTPEKIAKSKLFMSRLEKAYQAGLLARVAVDEVHCCSQWG 230          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: Q32NN1_XENLA (ATP-dependent DNA helicase n=2 Tax=Xenopus laevis TaxID=8355 RepID=Q32NN1_XENLA)

HSP 1 Score: 139 bits (349), Expect = 1.270e-34
Identity = 81/196 (41.33%), Postives = 113/196 (57.65%), Query Frame = 1
Query:    1 LLDHQPQRTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMIDGTKLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            LL+ + QR + ++ +  S  GG    NW  +D  WSQ +   L  +F ++++RS Q + +NAT+S RDVF++M TGGGKSLCYQLPA      T+V+ PLISL+EDQ   LN L   G          +K  +  V+ E   +  Q+     +LL+ T   V KSK+FM  L+K  + G LA+V V E HCCSQ G
Sbjct:   43 LLNKKIQRLSENAEAGSSAGGGDCAENWRNEDFLWSQKIRRALSDSFQLQTFRSLQLETINATMSGRDVFLIMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLNRL---GVSATSLNASSSKEHVKWVHGEMMNKKSQL-----KLLYVTPEKVAKSKVFMSRLEKAYQGGLLARVAVDEVHCCSQWG 230          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A0E9N870_SAICN (ATP-dependent DNA helicase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9N870_SAICN)

HSP 1 Score: 137 bits (346), Expect = 4.070e-34
Identity = 81/212 (38.21%), Postives = 121/212 (57.08%), Query Frame = 1
Query:    1 LLDHQPQRTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPV---------EGDMIDGTKLVMMLVNPEKGARPRQVL-------VSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            LLD   Q  A ++R          + N+A ++  WSQ + +L ++TFGI S+RS Q +++NATL  +D F +M TG GKSLCYQLPA +   +TVV+SPL+SLI+DQ   L +   RG            + ++ D T  + + + P+   R  + L       V A +L++ T   + KSK FM +LD+ A+ G LA++V+ EAHC SQ G
Sbjct:   64 LLDAADQAKAEETRV------SAKQRNYASENFPWSQRLRELAKNTFGITSFRSKQLEVMNATLDQKDAFCIMATGSGKSLCYQLPALISPGLTVVISPLVSLIQDQVLELKA---RGVTAVAGLSAGTDKDELKDATASMRLHLLPKSKKRKHEDLNEDVTEPVDALKLVYVTPERISKSKRFMSLLDQLAQVGRLARIVIDEAHCASQYG 266          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A7R9MH80_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MH80_9ACAR)

HSP 1 Score: 127 bits (319), Expect = 6.510e-33
Identity = 72/171 (42.11%), Postives = 99/171 (57.89%), Query Frame = 1
Query:   82 WARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMI--DGTKLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            +A D  +WSQ V  LL + FG K +RS Q   +NATLS  D  +VM TGGGKSLC+QLPA +   +T+VVSPLISL+EDQ   L  L +    V G     +  +++  + +P           S  ++++ T   + KSK FM  L+K  +NG L +VV+ E HCCSQ G
Sbjct:   57 FATDSYDWSQKVHKLLETVFGHKKFRSYQLMAINATLSATDCLLVMPTGGGKSLCFQLPALVNNGLTLVVSPLISLMEDQVNGLKELRIPTAVVSGQTTREENNRVLQAIADPS----------SDLKIVYVTPEKMAKSKRFMSQLEKCYRNGRLDRVVIDEVHCCSQWG 217          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A6I9XTF9_9SAUR (ATP-dependent DNA helicase Q1-like n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9XTF9_9SAUR)

HSP 1 Score: 127 bits (320), Expect = 7.770e-33
Identity = 77/207 (37.20%), Postives = 111/207 (53.62%), Query Frame = 1
Query:    4 LDHQPQ------------RTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMIDGTKLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            L+HQ Q            R   D+ S  S        +W ++D  WS  +  +L+ +FG++ +R  Q + +NAT++ RDVF+VM TGGGKSLCYQLPA      T+V+ PLISL+EDQ   L  L +    +       +K  +  V+ E  +R  Q+     +LL+ T   + KSKMFM  L+K  + G L ++ V E HCCSQ G
Sbjct:   30 LEHQQQLIQKKATLKKKIRQFSDTESGSSKEADSATEDWKKEDFPWSTKIRAVLQKSFGLQEFRPLQLETINATMAGRDVFLVMPTGGGKSLCYQLPAEGSQGFTLVICPLISLMEDQLMMLEQLGISATLLNAS---SSKEHVKWVHGEMLSRNSQL-----KLLYVTPEKIAKSKMFMSKLEKAYQTGQLTRIAVDEVHCCSQWG 228          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A2G8JKU5_STIJA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JKU5_STIJA)

HSP 1 Score: 133 bits (334), Expect = 8.490e-33
Identity = 77/185 (41.62%), Postives = 111/185 (60.00%), Query Frame = 1
Query:   40 RSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMI-DGTKLVMM-LVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            RSC+     LP+ ++   D +WSQ + +L  S FGI+S+R  Q++++NAT+S  DV ++M TGGGKSLC+QLPA L   IT+VVSPL+SL+EDQ   L  L +    +      D  K+V+  +VNP+          +  +LL+ T   + KSK FM  L K    G L+++V+ E HCCSQ G
Sbjct:   62 RSCQ-----LPDVDFKCSDFQWSQELHNLKTSMFGIESFRPYQEEVINATMSKHDVILIMPTGGGKSLCFQLPALLSEGITLVVSPLVSLMEDQAMTLQDLGIAATLLSASTSRDHLKVVLQDMVNPK----------AKLKLLYVTPEKIAKSKRFMAQLQKAYDKGMLSRIVIDEVHCCSQWG 231          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: UPI001CF25EA0 (ATP-dependent DNA helicase Q1 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF25EA0)

HSP 1 Score: 132 bits (332), Expect = 2.880e-32
Identity = 75/203 (36.95%), Postives = 110/203 (54.19%), Query Frame = 1
Query:   19 QRTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQP------------VEGDMID-GTKLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            QR + D+ +  S        NW R D  WSQ V + L+++F + ++R+ Q + +NAT++ +DVF++M TGGGKSLCYQLPA      T+V+ PL+SL+EDQ   L  L + G              V G+MID  ++L ++ V PEK                     + KSK+FM  L+K  + G LA++ + E HCCSQ G
Sbjct:   49 QRLSEDAEAGTSAEAESSSENWNRQDFSWSQKVKEELQNSFQLDTFRNLQLETINATMAGKDVFLIMPTGGGKSLCYQLPAVCSKGFTLVICPLVSLMEDQHMVLKRLGVSGTSLNAASSKDHVKWVHGEMIDKNSQLKLLYVTPEK---------------------IAKSKLFMSRLEKAYQAGRLARIAIDEVHCCSQWG 230          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: UPI000EAA76CB (ATP-dependent DNA helicase Q1 isoform X3 n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=UPI000EAA76CB)

HSP 1 Score: 130 bits (328), Expect = 4.960e-32
Identity = 79/210 (37.62%), Postives = 116/210 (55.24%), Query Frame = 1
Query:    1 LLDHQPQ------------RTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMIDGT--KLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            LL+HQ Q            +   D++S  S        +W ++D  WS  + D+L+ +FG++ +R  Q + +NAT++ RDVF+VM TGGGKSLCYQLPA      T+V+ PLISL+EDQ   L  L      V   +++ +  K  +  V+ E  +R  Q+     +LL+ T   + KSKMFM  L+K  + G L ++ V E HCCSQ G
Sbjct:   29 LLEHQQQLIQKKTILKKKIKQFSDTKSGSSKETESATEDWNKEDFPWSAKIRDVLQKSFGLQKFRPLQLEAINATMAGRDVFLVMPTGGGKSLCYQLPAEGSQGFTLVICPLISLMEDQLMMLEQL-----GVSATLLNASSSKEHVKWVHAEMLSRNSQL-----KLLYVTPEKIAKSKMFMSKLEKAYQTGQLTRIAVDEVHCCSQWG 228          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A670XUU8_PSETE (ATP-dependent DNA helicase n=2 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670XUU8_PSETE)

HSP 1 Score: 130 bits (328), Expect = 1.030e-31
Identity = 79/210 (37.62%), Postives = 116/210 (55.24%), Query Frame = 1
Query:    1 LLDHQPQ------------RTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMIDGT--KLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            LL+HQ Q            +   D++S  S        +W ++D  WS  + D+L+ +FG++ +R  Q + +NAT++ RDVF+VM TGGGKSLCYQLPA      T+V+ PLISL+EDQ   L  L      V   +++ +  K  +  V+ E  +R  Q+     +LL+ T   + KSKMFM  L+K  + G L ++ V E HCCSQ G
Sbjct:   28 LLEHQQQLIQKKTILKKKIKQFSDTKSGSSKETESATEDWNKEDFPWSAKIRDVLQKSFGLQKFRPLQLEAINATMAGRDVFLVMPTGGGKSLCYQLPAEGSQGFTLVICPLISLMEDQLMMLEQL-----GVSATLLNASSSKEHVKWVHAEMLSRNSQL-----KLLYVTPEKIAKSKMFMSKLEKAYQTGQLTRIAVDEVHCCSQWG 227          
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Match: A0A670XXC0_PSETE (ATP-dependent DNA helicase n=9 Tax=Elapidae TaxID=8602 RepID=A0A670XXC0_PSETE)

HSP 1 Score: 130 bits (328), Expect = 1.040e-31
Identity = 79/210 (37.62%), Postives = 116/210 (55.24%), Query Frame = 1
Query:    1 LLDHQPQ------------RTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIKSWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPLISLIEDQTRYLNSLIMRGQPVEGDMIDGT--KLVMMLVNPEKGARPRQVLVSAQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVG 588
            LL+HQ Q            +   D++S  S        +W ++D  WS  + D+L+ +FG++ +R  Q + +NAT++ RDVF+VM TGGGKSLCYQLPA      T+V+ PLISL+EDQ   L  L      V   +++ +  K  +  V+ E  +R  Q+     +LL+ T   + KSKMFM  L+K  + G L ++ V E HCCSQ G
Sbjct:   30 LLEHQQQLIQKKTILKKKIKQFSDTKSGSSKETESATEDWNKEDFPWSAKIRDVLQKSFGLQKFRPLQLEAINATMAGRDVFLVMPTGGGKSLCYQLPAEGSQGFTLVICPLISLMEDQLMMLEQL-----GVSATLLNASSSKEHVKWVHAEMLSRNSQL-----KLLYVTPEKIAKSKMFMSKLEKAYQTGQLTRIAVDEVHCCSQWG 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57238.13187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I8SNZ1_XENTR4.930e-3540.82ATP-dependent DNA helicase n=2 Tax=Xenopus tropica... [more]
Q32NN1_XENLA1.270e-3441.33ATP-dependent DNA helicase n=2 Tax=Xenopus laevis ... [more]
A0A0E9N870_SAICN4.070e-3438.21ATP-dependent DNA helicase n=1 Tax=Saitoella compl... [more]
A0A7R9MH80_9ACAR6.510e-3342.11Hypothetical protein (Fragment) n=1 Tax=Oppiella n... [more]
A0A6I9XTF9_9SAUR7.770e-3337.20ATP-dependent DNA helicase Q1-like n=1 Tax=Thamnop... [more]
A0A2G8JKU5_STIJA8.490e-3341.62ATP-dependent DNA helicase (Fragment) n=1 Tax=Stic... [more]
UPI001CF25EA02.880e-3236.95ATP-dependent DNA helicase Q1 n=2 Tax=Bufo TaxID=8... [more]
UPI000EAA76CB4.960e-3237.62ATP-dependent DNA helicase Q1 isoform X3 n=1 Tax=P... [more]
A0A670XUU8_PSETE1.030e-3137.62ATP-dependent DNA helicase n=2 Tax=Pseudonaja text... [more]
A0A670XXC0_PSETE1.040e-3137.62ATP-dependent DNA helicase n=9 Tax=Elapidae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57238contigH-elongata_contig57238:2534..3706 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.7
Seed ortholog evalue3.8e-28
Seed eggNOG ortholog2880.D7FHZ5
Preferred nameRECQL
KEGG koko:K10899
GOsGO:0000724,GO:0000725,GO:0000733,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016592,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0036310,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097617,GO:0140097,GO:1901360,GO:1901363
EggNOG free text desc.four-way junction helicase activity
EggNOG OGsCOG0514@1,KOG0353@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons4
Model size609
Cds size609
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57238.13187.1prot_H-elongata_contig57238.13187.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig57238 2534..3706 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930930.5538893-CDS-H-elongata_contig57238:2533..28191622930930.5538893-CDS-H-elongata_contig57238:2533..2819Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 2534..2819 +
1691679629.3822823-CDS-H-elongata_contig57238:2533..28191691679629.3822823-CDS-H-elongata_contig57238:2533..2819Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 2534..2819 +
1622930930.5720725-CDS-H-elongata_contig57238:3039..30971622930930.5720725-CDS-H-elongata_contig57238:3039..3097Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 3040..3097 +
1691679629.3928077-CDS-H-elongata_contig57238:3039..30971691679629.3928077-CDS-H-elongata_contig57238:3039..3097Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 3040..3097 +
1622930930.5861561-CDS-H-elongata_contig57238:3162..33011622930930.5861561-CDS-H-elongata_contig57238:3162..3301Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 3163..3301 +
1691679629.4072995-CDS-H-elongata_contig57238:3162..33011691679629.4072995-CDS-H-elongata_contig57238:3162..3301Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 3163..3301 +
1622930930.6023211-CDS-H-elongata_contig57238:3580..37061622930930.6023211-CDS-H-elongata_contig57238:3580..3706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 3581..3706 +
1691679629.4193873-CDS-H-elongata_contig57238:3580..37061691679629.4193873-CDS-H-elongata_contig57238:3580..3706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig57238 3581..3706 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig57238.13187.1

>prot_H-elongata_contig57238.13187.1 ID=prot_H-elongata_contig57238.13187.1|Name=mRNA_H-elongata_contig57238.13187.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp
LLDHQPQRTAVDSRSCRSLTGGLPEHNWARDDLEWSQPVVDLLRSTFGIK
SWRSSQKKIVNATLSDRDVFVVMCTGGGKSLCYQLPAFLRGSITVVVSPL
ISLIEDQTRYLNSLIMRGQPVEGDMIDGTKLVMMLVNPEKGARPRQVLVS
AQRLLWSTSYGVVKSKMFMEVLDKTAKNGPLAKVVVGEAHCCSQVGVFVD
DR*
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mRNA from alignment at H-elongata_contig57238:2534..3706+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig57238.13187.1 ID=mRNA_H-elongata_contig57238.13187.1|Name=mRNA_H-elongata_contig57238.13187.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1173bp|location=Sequence derived from alignment at H-elongata_contig57238:2534..3706+ (Himanthalia elongata Himel1 dioecious)
TTGCTTGATCACCAGCCCCAAAGAACTGCAGTCGATTCACGTTCATGTCG CTCCTTGACAGGGGGACTCCCGGAGCATAACTGGGCTAGAGACGATCTCG AATGGTCTCAGCCCGTGGTCGACCTTCTGCGGAGCACCTTCGGCATCAAG AGCTGGCGGTCGAGCCAGAAGAAGATAGTGAACGCCACGTTATCGGACAG AGACGTCTTCGTTGTCATGTGTACGGGCGGGGGGAAGTCCTTGTGCTACC AGCTCCCGGCTTTCCTCAGAGGCAGCATCACCGTTGGTGCGTTAATCTGT CCTTGGTCAGACAGCACTCTTCCGTGCTTGGGTCATAGTGAACAACCAAT ATATTTGAAGTCGTTCGACGCTTACGAATATATAGCATTGATTTATTCCT CCGGTTACCCCCGCTCCAACCCCCCGGGGTGGGGGGGGGTGGGGTGGAAC GCTGGCCAAAATCACACGACCGGGAAACCGCGCTCAAAACGCACGCGCGT GGGAAGTGGTCTCGCCGCTGATCTCCTTGATCGAAGACCAGACGCGATAT CTGAACAGTTTGATGTCTGGGTCGGCCGCCATGCTCTCGGCCGGACTGGC AAAAGGGAGACTGCGGACGTGTACCGAAGAATGCGCGGACAGCCCGTCGA GGGGGACATGATCGACGGAACCAAGCTGGTGATGATGTTAGTCAATCCCG AAAAAGGTGCTCGACCTAGGCAGGTTTTGGTGAGCGCGCAAAGATTGCTG TGGAGCACTTCGTACGGCGTTTTATCGTCCTCCTTTTGCTTTAAATCCGG TGGTAATCACATTCTTGGAGCGATCTAGGTTTAGCGACGGCTGGCGACAG CTCGGCTCGGCTCGGCGATGCATTTCTCCTGACTGATTCGGTCGATTCGT CGAAAGTTTTCTCCGCGAGAACATGAAATACGCGGTACACGAAGTACTGG CGGTTTCGAGTCACTGTAAGAGACAGCACACTGATATCAGAAGACAAATG GGGCATCGATTCGCTGTCGCCGTCGCCATCGCGCCGTCCGAGCGCAGGTG GTGAAGTCGAAAATGTTCATGGAGGTGTTGGACAAGACGGCGAAGAACGG CCCGCTTGCCAAGGTGGTGGTCGGCGAGGCTCACTGCTGCTCTCAGGTGG GAGTTTTCGTCGACGACAGATGA
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Coding sequence (CDS) from alignment at H-elongata_contig57238:2534..3706+

>mRNA_H-elongata_contig57238.13187.1 ID=mRNA_H-elongata_contig57238.13187.1|Name=mRNA_H-elongata_contig57238.13187.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig57238:2534..3706+ (Himanthalia elongata Himel1 dioecious)
TTGCTTGATCACCAGCCCCAAAGAACTGCAGTCGATTCACGTTCATGTCG
CTCCTTGACAGGGGGACTCCCGGAGCATAACTGGGCTAGAGACGATCTCG
AATGGTCTCAGCCCGTGGTCGACCTTCTGCGGAGCACCTTCGGCATCAAG
AGCTGGCGGTCGAGCCAGAAGAAGATAGTGAACGCCACGTTATCGGACAG
AGACGTCTTCGTTGTCATGTGTACGGGCGGGGGGAAGTCCTTGTGCTACC
AGCTCCCGGCTTTCCTCAGAGGCAGCATCACCGTTGTTGCTTGATCACCA
GCCCCAAAGAACTGCAGTCGATTCACGTTCATGTCGCTCCTTGACAGGGG
GACTCCCGGAGCATAACTGGGCTAGAGACGATCTCGAATGGTCTCAGCCC
GTGGTCGACCTTCTGCGGAGCACCTTCGGCATCAAGAGCTGGCGGTCGAG
CCAGAAGAAGATAGTGAACGCCACGTTATCGGACAGAGACGTCTTCGTTG
TCATGTGTACGGGCGGGGGGAAGTCCTTGTGCTACCAGCTCCCGGCTTTC
CTCAGAGGCAGCATCACCGTTGTGGTCTCGCCGCTGATCTCCTTGATCGA
AGACCAGACGCGATATCTGAACAGTTTGATTGGTCTCGCCGCTGATCTCC
TTGATCGAAGACCAGACGCGATATCTGAACAGTTTGATAATGCGCGGACA
GCCCGTCGAGGGGGACATGATCGACGGAACCAAGCTGGTGATGATGTTAG
TCAATCCCGAAAAAGGTGCTCGACCTAGGCAGGTTTTGGTGAGCGCGCAA
AGATTGCTGTGGAGCACTTCGTACGGCAATGCGCGGACAGCCCGTCGAGG
GGGACATGATCGACGGAACCAAGCTGGTGATGATGTTAGTCAATCCCGAA
AAAGGTGCTCGACCTAGGCAGGTTTTGGTGAGCGCGCAAAGATTGCTGTG
GAGCACTTCGTACGGCGTGGTGAAGTCGAAAATGTTCATGGAGGTGTTGG
ACAAGACGGCGAAGAACGGCCCGCTTGCCAAGGTGGTGGTCGGCGAGGCT
CACTGCTGCTCTCAGGTGGGAGTTTTCGTCGACGACAGATGAGTGGTGAA
GTCGAAAATGTTCATGGAGGTGTTGGACAAGACGGCGAAGAACGGCCCGC
TTGCCAAGGTGGTGGTCGGCGAGGCTCACTGCTGCTCTCAGGTGGGAGTT
TTCGTCGACGACAGATGA
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