mRNA_H-elongata_contig558.13012.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 6.360e-125 Identity = 207/480 (43.12%), Postives = 282/480 (58.75%), Query Frame = 3
Query: 192 SREMLMNAVELSFRRPDDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWDGSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRWRVLDSEGSLVRANVIAVVAPSIEDYQMPSKSEIKDRQ---------------DAVARGQIEVATSLRIMTRGEHELYCVSYQGRMVTINGVCVHAR-CGHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDR-GYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMGTTPFQMMTGRPP 1580
+++M+ NAV L + LMFPDASD WG +TQVP+ E+ + D SHEPLGFLS FRGSQL W +DKE FAI+S F+ + YLLW G +I DHRNLA IF P++C + K +QRL W + Q++Y IQHI GE N WGDLLSRW + + V AV PS D +PSK+ I++ Q D + R + R+M G L+ M +C H + GHR V T HRL YC W+ ++ D+ EFV+QCLHC+DSK+G +PRP G+ VHG G+VLHFDYL G+S + GL + GY ++LV+MDD+S F W+E +C ++ A+ +L C + GVP+ + S+ THF +M + LGV F V N WS+GT ERM RE+++T +AVL ER R +W ++ VQWA ++AYRER +TP+ +M GR P
Sbjct: 177 AQDMVANAVTL-YHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPA----VSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAP 651
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 391 bits (1004), Expect = 5.060e-118 Identity = 207/480 (43.12%), Postives = 282/480 (58.75%), Query Frame = 3
Query: 192 SREMLMNAVELSFRRPDDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWDGSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRWRVLDSEGSLVRANVIAVVAPSIEDYQMPSKSEIKDRQ---------------DAVARGQIEVATSLRIMTRGEHELYCVSYQGRMVTINGVCVHAR-CGHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDR-GYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMGTTPFQMMTGRPP 1580
+++M+ NAV L + LMFPDASD WG +TQVP+ E+ + D SHEPLGFLS FRGSQL W +DKE FAI+S F+ + YLLW G +I DHRNLA IF P++C + K +QRL W + Q++Y IQHI GE N WGDLLSRW + + V AV PS D +PSK+ I++ Q D + R + R+M G L+ M +C H + GHR V T HRL YC W+ ++ D+ EFV+QCLHC+DSK+G +PRP G+ VHG G+VLHFDYL G+S + GL + GY ++LV+MDD+S F W+E +C ++ A+ +L C + GVP+ + S+ THF +M + LGV F V N WS+GT ERM RE+++T +AVL ER R +W ++ VQWA ++AYRER +TP+ +M GR P
Sbjct: 953 AQDMVANAVTL-YHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNVPA----VSNRSAAVFMPSTPDCNLPSKNAIREVQQTVRASVGDTNACFTDTLGRVAPDDEGLFRVMIDGRKVLWIPDTARDMQLRLMLCAHMKEAGHRGVTATMHRLREYCCWSTMDRDVKEFVQQCLHCMDSKSGEIVPRPFGETVHGKRPGEVLHFDYLHVGKSGPLGADGLDESDGYVYLLVMMDDLSNFAWMEPTGTCTARLTAQHLLNWCKTLGVPEVWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVPAVQWALNTAYRERYASTPYHVMFGRAP 1427
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 382 bits (982), Expect = 9.350e-115 Identity = 207/485 (42.68%), Postives = 289/485 (59.59%), Query Frame = 3
Query: 192 SREMLMNAVELSFRRPDDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLC-WPMMDKESFAILSAFQCVPYLLWDGSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRWRVLDSEGSLVRANVIAVVAPSIEDYQMPSKSEIKDRQDAVARGQI--------EVATSLRIMTRGEHELYCVSYQGRMVTING-----------VCVHAR-CGHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGL-VDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMGTTPFQMMTGRPP 1580
+++++ AV LS P C LMFPDASD WG LTQVP+++L + D +HEP+GFLS F+G+Q W +DKE +AI+S F+ + YLLWD +IF DHRNLA IF P++C A++K +QRL W + Q++Y I+HI GE N WGDLLSRW + S V AV APS D MPSK ++D Q A AR ++ +T++ T L+ V GR V VC H + GHR T RL YC W +E + +FV+QCLHC+DSKAG +PRPLG+ VHG+ G+V+HFDYL G S + GL + G+K++LV+MDD+S +VWLE +C + A+ +L C GVP+ + S+ +HF MM + + LGV +F V N WS+GT ERM REV++T +A++ E +W ++ VQWA ++A+RER G+TP+ +M GR P
Sbjct: 1051 AQDLVARAVALSHPSPG-CAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSVPS----VSVRAAAVYAPSEPDAAMPSKQVVRDAQQA-ARSKLGALAGPASSFSTAVGTATLDAEGLFRVGMNGRDVLWIPDQASALQVRLMVCAHMKEAGHRGAVATLQRLSEYCCWFRMEEHVTDFVKQCLHCMDSKAGEKVPRPLGETVHGTRPGEVVHFDYLYVGASGPLGDDGLDEEEGFKYILVMMDDMSNWVWLEPTGACTACLTAQHLLTWCKILGVPEVWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAP 1529
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6A3I3R6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I3R6_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.450e-76 Identity = 183/495 (36.97%), Postives = 260/495 (52.53%), Query Frame = 3
Query: 141 RVDETAAEGHELNETNNSREMLMNAVELSFRRPDDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWD--GSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRW---RVLDSEGSLVRANVIAVV---APSIE-DYQMPSKSEIKDRQDAV-ARGQIEVATSLRIMTRGEHELYCVSY--QGRMVTINGVCVHARCG---HRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMG-TTPFQMMTGRP 1577
R+DE E + R L+ V L+ RP ++ DAS FWG LTQ+ E A L + H+PL FLS F G+ W ++KE+FAI+ A + + YLL G ++ DHRNL IF+P + A+++ + +L W + + F YVI+H+PGE+N WGDLLSRW +VL++ VR +AVV +P E ++ PS+SEI+ Q+A A GQI T L EH L Y +CV A G HR R T L A W+++ D+A FV CLHC+ + +G +PRP G+ + + ++LHFDYL+ E E GGL K+VLVL D +S +V L + A RA++ FGV + S+ G HF ++++ + LG HHF W++GTVE NREV K +A+LSER +WP +L VVQ A + +R+G TTP T P
Sbjct: 331 RLDEVGWHDTEASSFEAVRAALLRMVPLAHPRPT-AEVCLYTDASQDFWGAVLTQLKPGE--AELPLTEQQHQPLAFLSGRFVGASSRWSTIEKEAFAIVEATRRLEYLLLRPAGFRLYTDHRNLVYIFNPYATDGAMARYRADKLQRWALSLMSFKYVIEHVPGEENVWGDLLSRWGAGQVLEAHHGAVRVARLAVVQRVSPLEEPEFVWPSESEIRASQEAARASGQIMTGTQLD----DEHHLLVTVYIPDDAADLQQRLCVVAHAGASGHRGGRATQQALEAVFYWSSLGADVAAFVNGCLHCMTTASGR-IPRPFGETLVATKPNELLHFDYLTMVEGE----GGL-----KYVLVLKDGMSGYVELVARLQATADTAYRALIDWFKRFGVVHQWASDQGAHFRNQIIEQLQRALGAHHHFVTAYTPWANGTVEVANREVPKAMKALLSERRLSVRDWPALLPVVQAALNGMPADRLGGTTPLTAFTALP 808
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6A3ME06_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3ME06_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.640e-75 Identity = 183/519 (35.26%), Postives = 272/519 (52.41%), Query Frame = 3
Query: 69 AIFTGNELDALVTASHGGKCGTASRVDETAAEGHELNETNNSREMLMNAVELSFRRPDDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWD--GSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRW---RVLDSEGSLVRANVIAVV---APSIE-DYQMPSKSEIKDRQDAV-ARGQIEVATSL----RIMTRGEHELYCVSYQGRMVTINGVCVHARC-GHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMG-TTPFQMMTGRP 1577
A++ E A V S K R+DE E + R L+ V L+ RP ++ DAS FWG +TQ+ E A L ++ H+PL FLS F G+ CW ++KE+FAI+ A + + YLL G ++ DHRNL IF+P + A+++ + +L W + + F YVI+H+PGE+N WGDLLS W +VL+++ +R +AVV +P E ++ PS+SEI+ Q+A A GQI T + ++ ++Y + V HA GH R T L A W+++ D+A FV CLHC+ + A + +PRP G+ + + ++LHFDYL+ E E GGL K+VLVL D +S +V L + A RA++ FGV + S+ G HF ++++ + LG HHF W++GTVE +NREVLK +A+LSER P +WP +L VVQ A + +R+G TP T P
Sbjct: 595 ALYEALERAAQVAGSRKQKKMAKVRLDEVGWHDTEASSFEAVRAALLRMVPLAHPRPT-AEVCLYTDASQDFWGAVVTQLKPGE--AELPLIEQQHQPLAFLSGRFVGASSCWSTIEKEAFAIVEATRRLEYLLLRPAGFRLYTDHRNLVYIFNPYATDGAMARYRADKLQRWALLLMSFKYVIEHVPGEENVWGDLLSCWGAGQVLEAQQGALRVARLAVVQRVSPLEEPEFVWPSESEIRASQEAARASGQIMTGTQIDDERHLLVTRTGQVYIPDDAADLQQRLCVVAHAGASGHIGGRATQQALEAVFYWSSLGADVAAFVNGCLHCMTT-ASDRIPRPFGETLVATKPNELLHFDYLTMVEGE----GGL-----KYVLVLKDGMSGYVELVACLQATADTAYRALIDWFKRFGVVHQWASDQGAHFRNQIIEQLQRALGAHHHFVTAYTPWANGTVEVVNREVLKAMKALLSERRLPVRDWPGLLPVVQEALNGMPADRLGGKTPLTAFTALP 1100
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6A4CIS0_9STRA (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CIS0_9STRA) HSP 1 Score: 262 bits (669), Expect = 5.990e-74 Identity = 168/470 (35.74%), Postives = 254/470 (54.04%), Query Frame = 3
Query: 195 REMLMNAVELSFRRPDDCRAL-MFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLW--DGSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRW-----RVLDSEGSLVRANVIAVVAPSIED--YQMPSKSEIKDRQDAVARGQIEVATSLRIMTRGEHELYCVSYQGRMVTI-------NGVCV--HA-RCGHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMG 1544
R L+ V L+ PD +A+ +F DAS FW TQ E EL F +H PL FLS F G+QL WP ++KE++AI+ + + + YLL G ++F DHRNLA IF+P + ++ + + +L W + M + YVI+HI G+DN W D+LSRW +++ S+ + V+ ++P +ED ++ P+ EI++ Q + + E + E C G V I +CV HA R GHR R TT + A+C W ++ +D+ +FVR C+HCV ++ G PRP G +H + +VLHFDYL+ E E + K+VLV+ DD S FV L + A ++L +GV + S+ GTHF +++ ++ +LG HHF W++GTVE +NR +LK RAVLSER PS+W VLG+VQ A + +++G
Sbjct: 265 RSSLLAMVPLA--HPDPSKAVALFTDASQDFWSAVCTQDEESELEK--PFDKQNHRPLAFLSGRFTGAQLRWPTIEKEAYAIVESVKRLEYLLLRPGGFHLFTDHRNLAYIFNPSATDGSMQRYQADKLQRWAMAMTSYRYVIEHIRGDDNAWADMLSRWGNPQASRIEAASSVKQIAVVPQLSP-LEDEAFEWPTIDEIRNAQQQQQQTRPEGVS-------WSEERSCFVADGDRVWIPENCDISQRICVVAHAGRSGHRGERTTTASVAAWCWWPSLVDDVVQFVRSCIHCVATRDGRE-PRPYGAAIHATKPNEVLHFDYLTLPEDE--------NSHNKYVLVVKDDFSGFVELYPTAEPDARTCATSLLAWFHRYGVVWQWVSDQGTHFKNQVVHELAMKLGANHHFTTAYCPWANGTVEVVNRLLLKCIRAVLSERRLSPSKWETVLGMVQAALNQQPSDKLG 713
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: H3H555_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H555_PHYRM) HSP 1 Score: 251 bits (640), Expect = 6.130e-70 Identity = 165/477 (34.59%), Postives = 250/477 (52.41%), Query Frame = 3
Query: 195 REMLMNAVELSFRRP--DDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWD--GSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRWRV---LDSEGSLVRANVIAVV---APSIE-DYQMPSKSEIKDRQDAV---ARGQIEVATSLRIMTRGEHELYCVSYQGRMVTINGVCVHARC-GHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERM-GTTPFQMMTGRP 1577
R+ L+N V L+ P D C ++ DAS+ +WG +T + EEL L + H PL FLS F G+ WP ++KE+FAI+ A + + YLL G ++F DHRNL IF+P + +++ + +L W + + F YVI+H+PGE+N WGDLLSRW L++ + +RA +AVV +P E D+ PS+ EI+ Q A A ++ ++ +++ G + V HA GHR T L W + D+ FV +CLHC+ + AG +PRP G+ + + +VLHFD+L+ S + G K+VLVL D +S FV L A + ++ FGV + S+ G HF ++++ + LG HHF W++GTVE +NREVLK+ +A+LSER +WP VL VVQ A ++ +R+ G +P T P
Sbjct: 244 RDALLNMVPLAHPSPTADLC---LYSDASNDYWGAVVTMLDPEEL--KLPRAEQHHRPLAFLSGRFVGAAQRWPTIEKEAFAIVEAVRRLEYLLLRPRGFHLFTDHRNLVYIFNPYATDGMMARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRWGAGPPLEATRTAIRAARLAVVERVSPLEEADFVWPSEQEIRAVQQAAGAAAHPGVQWNEERQLQMTSTGQVWIPPDSGELQQRLCVVAHAGASGHRGAAATLKSLSTCFFWPTMGPDVTTFVNECLHCMVA-AGGRIPRPFGETLRATRPNEVLHFDFLTMIMSTS---------GVKYVLVLKDGMSGFVELLACTHATSDHAYQGLIDWFKRFGVVHQWVSDQGAHFRNQVVERLQRALGAHHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRMHVQDWPAVLPVVQAALNAMPADRLDGRSPLTAFTALP 705
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM) HSP 1 Score: 253 bits (647), Expect = 8.950e-70 Identity = 166/477 (34.80%), Postives = 251/477 (52.62%), Query Frame = 3
Query: 195 REMLMNAVELSFRRP--DDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWD--GSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRWRV---LDSEGSLVRANVIAVV---APSIE-DYQMPSKSEIKDRQDAV---ARGQIEVATSLRIMTRGEHELYCVSYQGRMVTINGVCVHARC-GHRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERM-GTTPFQMMTGRP 1577
R+ L+N V L+ P D C ++ DAS+ +WG +T + EEL L + H PL FLS F G+ WP ++KE+FAI+ A + + YLL G ++F DHRNL IF+P + +++ + +L W + + F YVI+H+PGE+N WGDLLSRW L++ + +RA +AVV +P E D+ PS+ EI+ Q A A ++ ++ +++ G + V HA GHR T L W + D+ FV +CLHC+ + AG +PRP G+ + + +VLHFD+L+ ES + G K+VLVL D +S FV L A + ++ FGV + S+ G HF ++++ + LG HHF W++GTVE +NREVLK+ +A+LSER +WP VL VVQ A ++ +R+ G +P T P
Sbjct: 972 RDALLNMVPLAHPSPTADLC---LYSDASNDYWGAVVTMLDPEEL--KLPRAEQHHRPLAFLSGRFVGAAQRWPTIEKEAFAIVEAVRRLEYLLLRPRGFHLFTDHRNLVYIFNPYATDGMMARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRWGAGPPLEATRTAIRAARLAVVERVSPLEEADFVWPSEQEIRAVQQAAGAAAHPGVQWNEERQLQMTSTGQVWIPPDSGELQQRLCVVAHAGASGHRGAAATLKSLSTCFFWPTMGPDVTTFVNECLHCMVA-AGGRIPRPFGETLRATRPNEVLHFDFLTMIESTS---------GVKYVLVLKDGMSGFVELLACTHATSDHAYQGLIDWFKRFGVVHQWVSDQGAHFRNQVVERLQRALGAHHHFTTAYTPWANGTVEVVNREVLKSVKALLSERRMHVQDWPAVLPVVQAALNAMPADRLDGRSPLTAFTALP 1433
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6A3GX76_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GX76_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.090e-69 Identity = 160/464 (34.48%), Postives = 243/464 (52.37%), Query Frame = 3
Query: 258 MFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLW--DGSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRW------RVLDSEGSLVRANVIAVVAPSIEDYQM--PSKSEIKDRQ---DAVARGQIEVATSLRIMTRGEHELYCVSYQGRMVTING-------VCVHARCG---HRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERM-GTTPFQMMTGRP 1577
++ DAS FWG ++Q+ E+ L D H+PL FLS F G+ WP ++KE+FAI+ A + + LL G ++ DHRNL IF P + A+++ + +L W + + F YVI+H+PGE N WGDLLSRW + + + + R VI V+P +ED++ P+++EI+ Q A R Q V E +LY S GR+ + +CV A G HR R TT L W + D++ FV CLHC+ + AG +P+P G+ + + ++LHFDYL+ ESE+ G K+VLVL D++S +V L + ++ FGV + S+ G HF ++++ + LG HHF W++GTVE +NRE+L+ +A+LSER P +WP VL VVQ A ++ +R+ G +P T P
Sbjct: 15 LYTDASQDFWGAMVSQLEPLEVSRPLE--DHHHQPLAFLSGRFVGAAARWPTIEKEAFAIVEATRRLECLLLRPKGFRLYTDHRNLVYIFDPYATDGAMARYQADKLQRWAMSLLSFRYVIEHVPGEANVWGDLLSRWGAGSTLQAVCASTRIARLAVIERVSP-LEDHEFVWPTEAEIRVLQRGTSASGRDQHGVQWD------DERQLYVTS-AGRVWIPDAAVEMQQRLCVVAHAGASGHRGARATTQALAVVFFWTTMSTDVSVFVSGCLHCM-ATAGGRIPQPFGETLRATKPNEILHFDYLTMVESES---------GLKYVLVLKDNMSGYVGLIACPNPTADYVYTGLMDWFKRFGVVLQWVSDQGAHFRNQVIERLQRALGAQHHFTTAYTPWANGTVEVVNRELLRAVKALLSERQLPVRDWPAVLSVVQGALNAMPADRLDGKSPLTAFTALP 458
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Match: A0A6A4CL72_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CL72_9STRA) HSP 1 Score: 249 bits (635), Expect = 9.930e-69 Identity = 166/482 (34.44%), Postives = 250/482 (51.87%), Query Frame = 3
Query: 195 REMLMNAVELSFRRP--DDCRALMFPDASDLFWGCCLTQVPEEELVAMLSFMDTSHEPLGFLSVVFRGSQLCWPMMDKESFAILSAFQCVPYLLWD--GSNIFCDHRNLADIFSPQSCGMALSKAASQRLAGWLVCMNQFNYVIQHIPGEDNNWGDLLSRW---RVLDSEGSLVRANVIAVV--APSIED--YQMPSKSEIKDRQDAVARGQIEVATSLRIMTRGEHELYCVSYQGRMVTING------VCVHARCG---HRRVRGTTHRLGAYCAWNNIENDIAEFVRQCLHCVDSKAGNAMPRPLGDLVHGS*VGDVLHFDYLSSGESEAIDMGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPKAFTSNGGTHFTGKMMQIVSSRLGVVHHFGVTNVSWSHGTVERMNREVLKTFRAVLSERHRPPSEWPLVLGVVQWAFHSAYRERMG-TTPFQMMTGRP 1577
R L+ V L+ P D C ++ DAS FWG +TQ+P E L+ D H PL FLS F G++ W ++KE++AI+ A + + YLL G ++ DHRNL IF+P + +++ + +L W + + F Y+I+H+PGE N WGDLLSRW +V + E R +AVV +ED + PS++EIK QDA ++ + + GE EL +S + + +CV A G HR + T L + W + D+A FV +C HC+ + +G +PRP G+ + + ++LHFDYLS E D G K+VLVL D +S +V L + A +A++ FGV + S+ G HF ++++ + LG HHF W++GTVE +NREVLK +A+LSE +WP +L VVQ A +S +R+G +P T P
Sbjct: 371 RTALLKMVPLAHPNPTMDVC---LYTDASQDFWGAAVTQLPAGEAQRPLAEQD--HRPLAFLSGRFVGAESRWSTIEKEAYAIVEATRRLEYLLLRPRGFRLYTDHRNLVYIFNPYATDGTMARYQADKLQRWALSLMSFQYIIEHVPGEVNVWGDLLSRWGAGQVREDEHEATRVARLAVVERVSPLEDPEFVWPSEAEIKAVQDAAREAGQDLEEAQQT---GERELMVMSSGQVWIPADAEDLRQRLCVIAHAGASGHRGAQTTQRALESVFYWKTLAVDVAAFVGECQHCMATASGR-IPRPFGETLVATKPNEILHFDYLSMVEG---------DGGVKYVLVLKDGMSGYVELVVCLQATADTAYQALIDWFKRFGVVHQWVSDQGAHFRNQIVERLQRALGAQHHFVTAYTPWANGTVEVVNREVLKCMKALLSELRLAIRDWPALLPVVQAALNSMPADRLGGKSPLTAFTALP 834 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig558.13012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig558.13012.1 >prot_H-elongata_contig558.13012.1 ID=prot_H-elongata_contig558.13012.1|Name=mRNA_H-elongata_contig558.13012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp MGGLVDRGYKHVLVLMDDVSRFVWLEEAVSCLMKVAARAVLKCCASFGVPback to top mRNA from alignment at H-elongata_contig558:5959..7634- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig558.13012.1 ID=mRNA_H-elongata_contig558.13012.1|Name=mRNA_H-elongata_contig558.13012.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1676bp|location=Sequence derived from alignment at H-elongata_contig558:5959..7634- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig558:5959..7634- >mRNA_H-elongata_contig558.13012.1 ID=mRNA_H-elongata_contig558.13012.1|Name=mRNA_H-elongata_contig558.13012.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at H-elongata_contig558:5959..7634- (Himanthalia elongata Himel1 dioecious)back to top |