mRNA_H-elongata_contig55352.12954.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig55352.12954.1
Unique NamemRNA_H-elongata_contig55352.12954.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 1.300e-31
Identity = 92/202 (45.54%), Postives = 120/202 (59.41%), Query Frame = 3
Query:  666 LCPMQVPFQTSSQAAK----PHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLL--------RGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 1235
            LCP  +    + +  K    P   + +YK+AARNLREY+ VPSMTP KL++TL  LKL P+RLVK+GLAP+ LL              + P      NEDLAE+V A +ELM++ DD KE N+   G V  +P       +N  E  +D  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+VD KDL
Sbjct:   97 LCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWND---GFVSVEP-ADTSSPDNDNEEKNDAVAPEVKKNL-IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 293          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 6.100e-31
Identity = 95/203 (46.80%), Postives = 123/203 (60.59%), Query Frame = 3
Query:  666 LCPMQVPFQTSSQ----AAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 1235
            LCP  +    + +    A KP   + +YK+AARNLREY+ VPSMTP KL++TL  L+L P+RLVK+GLAP+ LL   MK  A      +         NEDLAE+V A +ELM+V DD KE N+   G V  +P      G N  E  +D  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+V+ KDL
Sbjct:   81 LCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWND---GFVSVEPADTSSPG-NDNEEKNDAVAPEVKKNL-IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDL 277          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 9.710e-31
Identity = 95/209 (45.45%), Postives = 121/209 (57.89%), Query Frame = 3
Query:  666 LCP----MQVPFQTSSQAAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQP------TVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 1235
            LCP    +    + S  A KP   + +YK+AARNLREY+ VPSMT  KLI+TL  LKL P+RLVK+GLAP+ LL   MK  A      +         NEDLAE+V A +ELM+V DD KE N+  V    +        T K    +N  E  ++  AP+ K  + IH A +   I++RPREVRPLL+AL V P R  KLG+VD KDL
Sbjct:   99 LCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDL-IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 305          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 1.140e-30
Identity = 93/203 (45.81%), Postives = 118/203 (58.13%), Query Frame = 3
Query:  666 LCPMQVPFQTSSQAAK----PHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 1235
            LCP  +    + +  K    P     +YK+AARNLREY+ VPSMTP KL++TL  LKL P+RLVK+GLAP+ LL   MK         +         NEDLAE V A +E M+V DD KE N+  V     + +  + G E   E  DD  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+VD KDL
Sbjct:  108 LCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLL-ARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSSSDNGNE---EENDDA-APEVKQNL-IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDL 304          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 7.770e-30
Identity = 95/209 (45.45%), Postives = 121/209 (57.89%), Query Frame = 3
Query:  666 LCPMQVPFQTSSQAAKPHESSE----IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVG-----NVGEQP-TVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 1235
            LCP  +    + +  KP    +    +YK+AARNLREY+ VPSMT  KLI+TL  LKL PRRLVK+GLAP+ LL   MK  A   +  +         NEDLAE+V A +ELM+V DD KE N   V      +    P T K    +N  E  +D  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+V+ K L
Sbjct:   81 LCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLL-ARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNL-IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.920e-28
Identity = 92/203 (45.32%), Postives = 118/203 (58.13%), Query Frame = 3
Query:  666 LCPMQVPFQTSSQAAK----PHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 1235
            LCP  +    + +  K    P    ++YK+AARNLREY+ VPSMTP KL++TL  LKL P+RLVK+GLAP+ LL   MK  A      +         NEDLAE+V A +ELM+V D  KE N+   G V  +P        +  E  D   AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+V  KDL
Sbjct:   99 LCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWND---GFVSVEPAEISFPANDNEEKND--AAPEAKKNL-IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDL 294          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.790e-21
Identity = 78/183 (42.62%), Postives = 104/183 (56.83%), Query Frame = 3
Query:  666 LCP----MQVPFQTSSQAAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQP------TVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPRE 1157
            LCP    +    + S  A KP   + +YK+AARNLREY+ VPSMTP KLI+TL  LKL P+RLVK+GLAP+ LL   MK  A      +         NEDLA++V A +ELM+V +D KE N+  V    + P      T +    +N  E  +D  AP+ K  + IH A +A  I++RPRE
Sbjct:   96 LCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSV-EDKKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNL-IHKAFIAGGIQLRPRE 275          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 7.850e-20
Identity = 104/280 (37.14%), Postives = 137/280 (48.93%), Query Frame = 3
Query:  681 VPFQTSSQAAKPHESSE-------IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENA-IEMTDDLE-APDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDLHR-HPHGRG------RHDGKPYRPMGRRI-------GFLHPRSMVFAPPRIGADHAAPLVHRSPHPMKGHPIHEVR--HMHEGGPV 1445
            V   T+S  A  +E+ +       +YK  ARNLREYH VPSMT + L +T+ LL+L P RLV +GLAP KLL+G     A     A   D + +  +++E        +++++N V +         G  E+  I   + L    +++ K P+HAALVAA I +RPRE RPLL AL V P R VKLG+V  ++L R  P GR       RH G P  P GR         G   PR     PP  G     P  HR  H   GH        H+H  GPV
Sbjct:    2 VSINTTSNNAMNNETMDSSNNGTLLYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADA----HADTTDSSGSSGSEVE-------PEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELRRSRPGGRRGGPSHLRH-GHPGGPGGRXHXXXRGGRGMGRPRG----PPPYG-----PPPHRHVH---GHGKRRAHGDHLHSSGPV 257          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.220e-9
Identity = 57/163 (34.97%), Postives = 83/163 (50.92%), Query Frame = 3
Query:  732 IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIV 1220
            ++K AARNLREYH VPS+TP  L  T+ LL+L P RLV +GLAP+ LL    KG +   + A + D +    A+ E         ++N     ++    +     G + I   + +    R  K PI A  VA  +++RPRE RPLL  + +     V L +V
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILL----KGNSTAGVDADSTDGSGGFEAEEE---------QANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLLRGVVLLTSSTVALEVV 190          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.850e-9
Identity = 53/147 (36.05%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  732 IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLL 1172
            +YK AARNL EYH VPSMT   L +T+ LL+L P RLV +GLAP++LL G  K  A                   E+     D  + +++   N  +   ++     + +   D ++      K PIHA  VAA +++RPRE RPLL
Sbjct:   51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEG--KSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIEH----DHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLL 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LN66_ECTSI1.300e-3145.54PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI6.100e-3146.80PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE9.710e-3145.45PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE1.140e-3045.81PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE7.770e-3045.45PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE1.920e-2845.32PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI2.790e-2142.62PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KVV7_9PHAE7.850e-2037.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE1.220e-934.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3J2_9PHAE1.850e-936.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55352contigH-elongata_contig55352:2..2297 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size2296
Cds size861
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55352.12954.1prot_H-elongata_contig55352.12954.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig55352 676..1536 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930902.945132-UTR-H-elongata_contig55352:1..6751622930902.945132-UTR-H-elongata_contig55352:1..675Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55352 2..675 +
1691679618.1685781-UTR-H-elongata_contig55352:1..6751691679618.1685781-UTR-H-elongata_contig55352:1..675Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55352 2..675 +
1622930902.981722-UTR-H-elongata_contig55352:1536..22971622930902.981722-UTR-H-elongata_contig55352:1536..2297Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55352 1537..2297 +
1691679618.1899757-UTR-H-elongata_contig55352:1536..22971691679618.1899757-UTR-H-elongata_contig55352:1536..2297Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig55352 1537..2297 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930902.9648464-CDS-H-elongata_contig55352:675..15361622930902.9648464-CDS-H-elongata_contig55352:675..1536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55352 676..1536 +
1691679618.1790154-CDS-H-elongata_contig55352:675..15361691679618.1790154-CDS-H-elongata_contig55352:675..1536Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig55352 676..1536 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig55352.12954.1

>prot_H-elongata_contig55352.12954.1 ID=prot_H-elongata_contig55352.12954.1|Name=mRNA_H-elongata_contig55352.12954.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=287bp
MQVPFQTSSQAAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLK
LGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVT
DDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAAL
VAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDLHRHPHGRGRHDGK
PYRPMGRRIGFLHPRSMVFAPPRIGADHAAPLVHRSPHPMKGHPIHEVRH
MHEGGPVCVRGAGVRRCGPGGRSGCGGRRRCGYHCG*
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mRNA from alignment at H-elongata_contig55352:2..2297+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig55352.12954.1 ID=mRNA_H-elongata_contig55352.12954.1|Name=mRNA_H-elongata_contig55352.12954.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2296bp|location=Sequence derived from alignment at H-elongata_contig55352:2..2297+ (Himanthalia elongata Himel1 dioecious)
GGATGTTCGGAGAGTGAGAATGAGCCTAAAGTCTTTTAAATAAAAATAAT GGTCACACTTTGGTCCACATTCGAAGCTGATGGTATGTGGTCCCCTGGAC TGCACTTCTCAATGTGGACCAAAATGTGACATTAAAAAATTGTCACACAT AATTAATGGTGTTCCCCAATACGACGCAGAAATCGAAAATCAGAATTTTA ATGAGTTGGATTCAAGCAAGGCGATTCTTTTTGGCCGACGATTTTTTGGA GTGCTCAACTTGCGACGCGAACAAAAAGTATGTTGATCTCGACAACCGCG TGCGGAATGGACGATGTTTTAGTAGGGGGAATAGTCGACCTAGCAATATC TTATAATTTAGAATAGCCGTAGAATACAGTAGCCTACTTGCATAAGAGGA AAGGAAATAGTATACCGTATAAAATATACCAGTTAAAGTTTTTGAAGCGA ATCGTGGATGTTTTCACCTTGATTTTGTACGAATAATACGTGTCGTAAAC TTGGGGAGATTCCACATCGCAGCACAAGCTCTAGCCTCGCCTTCTCTTGA CTCTTATTTCTTCTTTCGCGCTCGATTTCTGTTCAATGTCCCCCCCACTC GCGCATCAGGCAACCGATCTTCGCGTTTCCTGCTACCCCACCCTTATTCA TTTGTCCTTAATCCACTGTGCCCTATGCAGGTGCCGTTCCAAACTTCGTC TCAAGCCGCCAAGCCTCATGAATCGAGTGAGATCTACAAGCTGGCCGCTC GCAACCTGCGGGAGTATCACCGTGTGCCGTCCATGACGCCCAATAAGCTC ATCAGGACGCTCACCCTCTTGAAGCTGGGTCCTCGCCGCCTGGTCAAGCG AGGGCTTGCGCCGAGAAAGCTTTTGCGGGGGGTGATGAAGGGGCGGGCGC CTCCTAGAATCAGTGCGGCTAATGAGGACCTCGCCGAGACTGTCCGCGCC GACATCGAGCTGATGACGGTTACAGACGACACGAAGGAGAGCAACGAGAA TCTCGTGGGGAATGTAGGAGAGCAACCCACAGTAAAAGAGGGCGGTGGCG AGAACGCCATAGAGATGACAGACGATCTCGAGGCGCCCGACCGTAAGCCG AAGATGCCCATCCACGCCGCCCTTGTCGCCGCCGATATCAAGATTCGCCC CCGGGAGGTCAGGCCTCTCCTCATGGCCCTTCGTGTGCACCCCCGCCGCT TCGTCAAGCTCGGCATCGTTGACGCCAAGGACCTCCACAGGCACCCCCAC GGCCGCGGCCGTCATGATGGCAAGCCCTACAGACCGATGGGTCGCCGCAT TGGTTTTCTCCACCCGCGCTCTATGGTTTTCGCTCCCCCGCGAATTGGCG CCGATCATGCGGCCCCCCTGGTTCACCGTAGTCCTCATCCCATGAAGGGG CACCCTATCCATGAGGTTCGGCACATGCACGAAGGCGGTCCCGTGTGTGT CCGTGGTGCTGGAGTCCGGCGCTGCGGTCCCGGAGGACGCAGTGGATGCG GCGGGCGCCGGCGTTGTGGGTACCACTGCGGCTAATCGGCCAGTCGCGGC AGGAGAGGGCACACTTAACATGAGGGCACAGCTATCCGCTCTTGGCGGCC TTGTTGAGCAGGGTGTAGAGGGAAGGTGCTATTTTGGCATAGGCGATCTC ATATGGAGTATGATCCTAGTAGTGCTGTAGTTATGCAAGCGGGCAGAGGT CTCCCTCGGAAAAATAGATACGAGGGTCGGACACCAGAGGTGGATCGAAA ATGGTGCCACACAATTTGAGACTTGTGCCCGAATGCAGATTGGTGGATTC GTCAATGTATGGTCGGCTGGATATATTGCATGAAAACTTTGCATGTTGAC ATTCGTTGGAAAGATTGGTGGGCAGCAGCTTGAGCAGTCTGCGCCAGATG AGCCGTACGATGTACCCTGGTACATACACTAGACGGGATGGAAGGGAGAA GGCAAGGGGGGTAATGATAGGTTCGCCGTCGTACCTTTCGGACTAGAAAC GAATGTGATATATTCTGGATCCGGTGAAATAATGCCGAGACTGGTCAATG CAGCGGTATAGGTATGTGTCTTCGATAGCAGAGCTGCCTCACTACACCTT CACCGTTGAATGAGAGGTGAGAGCTCTGAGGACTTGCGTTAAAGTATATT CGGAGGGTTGGAATGAGTTCAAGGTTTTTCTAATAATAATATATAATACC TGGTACTACATATTACGAGTTACGTACTGGCATGAAAACCATGTGAGGTG GTTTGAATGGGAGTTCAATGAAAAACAAAATGTGTAATACTTGCCG
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Coding sequence (CDS) from alignment at H-elongata_contig55352:2..2297+

>mRNA_H-elongata_contig55352.12954.1 ID=mRNA_H-elongata_contig55352.12954.1|Name=mRNA_H-elongata_contig55352.12954.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1722bp|location=Sequence derived from alignment at H-elongata_contig55352:2..2297+ (Himanthalia elongata Himel1 dioecious)
ATGCAGGTGCCGTTCCAAACTTCGTCTCAAGCCGCCAAGCCTCATGAATC
GAGTGAGATCTACAAGCTGGCCGCTCGCAACCTGCGGGAGTATCACCGTG
TGCCGTCCATGACGCCCAATAAGCTCATCAGGACGCTCACCCTCTTGAAG
CTGGGTCCTCGCCGCCTGGTCAAGCGAGGGCTTGCGCCGAGAAAGCTTTT
GCGGGGGGTGATGAAGGGGCGGGCGCCTCCTAGAATCAGTGCGGCTAATG
AGGACCTCGCCGAGACTGTCCGCGCCGACATCGAGCTGATGACGGTTACA
GACGACACGAAGGAGAGCAACGAGAATCTCGTGGGGAATGTAGGAGAGCA
ACCCACAGTAAAAGAGGGCGGTGGCGAGAACGCCATAGAGATGACAGACG
ATCTCGAGGCGCCCGACCGTAAGCCGAAGATGCCCATCCACGCCGCCCTT
GTCGCCGCCGATATCAAGATTCGCCCCCGGGAGGTCAGGCCTCTCCTCAT
GGCCCTTCGTGTGCACCCCCGCCGCTTCGTCAAGCTCGGCATCGTTGACG
CCAAGGACCTCCACAGGCACCCCCACGGCCGCGGCCGTCATGATGGCAAG
CCCTACAGACCGATGGGTCGCCGCATTGGTTTTCTCCACCCGCGCTCTAT
GGTTTTCGCTCCCCCGCGAATTGGCGCCGATCATGCGGCCCCCCTGGTTC
ACCGTAGTCCTCATCCCATGAAGGGGCACCCTATCCATGAGGTTCGGCAC
ATGCACGAAGGCGGTCCCGTGTGTGTCCGTGGTGCTGGAGTCCGGCGCTG
CGGTCCCGGAGGACGCAGTGGATGCGGCGGGCGCCGGCGTTGTGGGTACC
ACTGCGGCTAAATGCAGGTGCCGTTCCAAACTTCGTCTCAAGCCGCCAAG
CCTCATGAATCGAGTGAGATCTACAAGCTGGCCGCTCGCAACCTGCGGGA
GTATCACCGTGTGCCGTCCATGACGCCCAATAAGCTCATCAGGACGCTCA
CCCTCTTGAAGCTGGGTCCTCGCCGCCTGGTCAAGCGAGGGCTTGCGCCG
AGAAAGCTTTTGCGGGGGGTGATGAAGGGGCGGGCGCCTCCTAGAATCAG
TGCGGCTAATGAGGACCTCGCCGAGACTGTCCGCGCCGACATCGAGCTGA
TGACGGTTACAGACGACACGAAGGAGAGCAACGAGAATCTCGTGGGGAAT
GTAGGAGAGCAACCCACAGTAAAAGAGGGCGGTGGCGAGAACGCCATAGA
GATGACAGACGATCTCGAGGCGCCCGACCGTAAGCCGAAGATGCCCATCC
ACGCCGCCCTTGTCGCCGCCGATATCAAGATTCGCCCCCGGGAGGTCAGG
CCTCTCCTCATGGCCCTTCGTGTGCACCCCCGCCGCTTCGTCAAGCTCGG
CATCGTTGACGCCAAGGACCTCCACAGGCACCCCCACGGCCGCGGCCGTC
ATGATGGCAAGCCCTACAGACCGATGGGTCGCCGCATTGGTTTTCTCCAC
CCGCGCTCTATGGTTTTCGCTCCCCCGCGAATTGGCGCCGATCATGCGGC
CCCCCTGGTTCACCGTAGTCCTCATCCCATGAAGGGGCACCCTATCCATG
AGGTTCGGCACATGCACGAAGGCGGTCCCGTGTGTGTCCGTGGTGCTGGA
GTCCGGCGCTGCGGTCCCGGAGGACGCAGTGGATGCGGCGGGCGCCGGCG
TTGTGGGTACCACTGCGGCTAA
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