prot_H-elongata_contig55352.12954.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55352.12954.1
Unique Nameprot_H-elongata_contig55352.12954.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length287
Homology
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.920e-34
Identity = 89/185 (48.11%), Postives = 114/185 (61.62%), Query Frame = 0
Query:   11 AAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLL--------RGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 187
            A  P   + +YK+AARNLREY+ VPSMTP KL++TL  LKL P+RLVK+GLAP+ LL              + P      NEDLAE+V A +ELM++ DD KE N+   G V  +P       +N  E  +D  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+VD KDL
Sbjct:  114 AEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWND---GFVSVEP-ADTSSPDNDNEEKNDAVAPEVKKNL-IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 293          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.980e-33
Identity = 92/186 (49.46%), Postives = 117/186 (62.90%), Query Frame = 0
Query:   11 AAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 187
            A KP   + +YK+AARNLREY+ VPSMTP KL++TL  L+L P+RLVK+GLAP+ LL   MK  A      +         NEDLAE+V A +ELM+V DD KE N+   G V  +P      G N  E  +D  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+V+ KDL
Sbjct:   98 ANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWND---GFVSVEPADTSSPG-NDNEEKNDAVAPEVKKNL-IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDL 277          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 9.180e-33
Identity = 92/195 (47.18%), Postives = 116/195 (59.49%), Query Frame = 0
Query:    8 SSQAAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQP------TVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 187
            S  A KP   + +YK+AARNLREY+ VPSMT  KLI+TL  LKL P+RLVK+GLAP+ LL   MK  A      +         NEDLAE+V A +ELM+V DD KE N+  V    +        T K    +N  E  ++  AP+ K  + IH A +   I++RPREVRPLL+AL V P R  KLG+VD KDL
Sbjct:  113 SEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDL-IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 305          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 9.540e-33
Identity = 89/183 (48.63%), Postives = 111/183 (60.66%), Query Frame = 0
Query:   14 PHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 187
            P     +YK+AARNLREY+ VPSMTP KL++TL  LKL P+RLVK+GLAP+ LL   MK         +         NEDLAE V A +E M+V DD KE N+  V     + +  + G E   E  DD  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+VD KDL
Sbjct:  128 PDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLL-ARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSSSDNGNE---EENDDA-APEVKQNL-IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDL 304          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 3.180e-32
Identity = 92/190 (48.42%), Postives = 114/190 (60.00%), Query Frame = 0
Query:   13 KPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVG-----NVGEQP-TVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 187
            KP     +YK+AARNLREY+ VPSMT  KLI+TL  LKL PRRLVK+GLAP+ LL   MK  A   +  +         NEDLAE+V A +ELM+V DD KE N   V      +    P T K    +N  E  +D  AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+V+ K L
Sbjct:  100 KPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLL-ARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNL-IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 2.600e-30
Identity = 88/183 (48.09%), Postives = 111/183 (60.66%), Query Frame = 0
Query:   14 PHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDL 187
            P    ++YK+AARNLREY+ VPSMTP KL++TL  LKL P+RLVK+GLAP+ LL   MK  A      +         NEDLAE+V A +ELM+V D  KE N+   G V  +P        +  E  D   AP+ K  + IH A +A  I++RPREVRPLL+AL V P R  KLG+V  KDL
Sbjct:  119 PDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWND---GFVSVEPAEISFPANDNEEKND--AAPEAKKNL-IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDL 294          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 3.540e-22
Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 0
Query:    8 SSQAAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAA---------NEDLAETVRADIELMTVTDDTKESNENLVGNVGEQP------TVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPRE 161
            S  A KP   + +YK+AARNLREY+ VPSMTP KLI+TL  LKL P+RLVK+GLAP+ LL   MK  A      +         NEDLA++V A +ELM+V +D KE N+  V    + P      T +    +N  E  +D  AP+ K  + IH A +A  I++RPRE
Sbjct:  110 SKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLL-ARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSV-EDKKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNL-IHKAFIAGGIQLRPRE 275          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.740e-21
Identity = 99/256 (38.67%), Postives = 128/256 (50.00%), Query Frame = 0
Query:   20 IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENA-IEMTDDLE-APDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDLHR-HPHGRG------RHDGKPYRPMGRRI-------GFLHPRSMVFAPPRIGADHAAPLVHRSPHPMKGHPIHEVR--HMHEGGPV 257
            +YK  ARNLREYH VPSMT + L +T+ LL+L P RLV +GLAP KLL+G     A     A   D + +  +++E        +++++N V +         G  E+  I   + L    +++ K P+HAALVAA I +RPRE RPLL AL V P R VKLG+V  ++L R  P GR       RH G P  P GR         G   PR     PP  G     P  HR  H   GH        H+H  GPV
Sbjct:   26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADA----HADTTDSSGSSGSEVE-------PEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREELRRSRPGGRRGGPSHLRH-GHPGGPGGRXHXXXRGGRGMGRPRG----PPPYG-----PPPHRHVH---GHGKRRAHGDHLHSSGPV 257          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.040e-10
Identity = 57/163 (34.97%), Postives = 83/163 (50.92%), Query Frame = 0
Query:   20 IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLLMALRVHPRRFVKLGIV 182
            ++K AARNLREYH VPS+TP  L  T+ LL+L P RLV +GLAP+ LL    KG +   + A + D +    A+ E         ++N     ++    +     G + I   + +    R  K PI A  VA  +++RPRE RPLL  + +     V L +V
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILL----KGNSTAGVDADSTDGSGGFEAEEE---------QANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLLRGVVLLTSSTVALEVV 190          
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.350e-10
Identity = 53/147 (36.05%), Postives = 75/147 (51.02%), Query Frame = 0
Query:   20 IYKLAARNLREYHRVPSMTPNKLIRTLTLLKLGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVTDDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAALVAADIKIRPREVRPLL 166
            +YK AARNL EYH VPSMT   L +T+ LL+L P RLV +GLAP++LL G  K  A                   E+     D  + +++   N  +   ++     + +   D ++      K PIHA  VAA +++RPRE RPLL
Sbjct:   51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEG--KSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIEH----DHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLL 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55352.12954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LN66_ECTSI8.920e-3448.11PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN68_ECTSI2.980e-3349.46PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE9.180e-3347.18PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE9.540e-3348.63PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE3.180e-3248.42PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE2.600e-3048.09PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI3.540e-2244.38PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KVV7_9PHAE1.740e-2138.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE1.040e-1034.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3J2_9PHAE2.350e-1036.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55352contigH-elongata_contig55352:676..1536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55352.12954.1mRNA_H-elongata_contig55352.12954.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55352 2..2297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55352.12954.1 ID=prot_H-elongata_contig55352.12954.1|Name=mRNA_H-elongata_contig55352.12954.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=287bp
MQVPFQTSSQAAKPHESSEIYKLAARNLREYHRVPSMTPNKLIRTLTLLK
LGPRRLVKRGLAPRKLLRGVMKGRAPPRISAANEDLAETVRADIELMTVT
DDTKESNENLVGNVGEQPTVKEGGGENAIEMTDDLEAPDRKPKMPIHAAL
VAADIKIRPREVRPLLMALRVHPRRFVKLGIVDAKDLHRHPHGRGRHDGK
PYRPMGRRIGFLHPRSMVFAPPRIGADHAAPLVHRSPHPMKGHPIHEVRH
MHEGGPVCVRGAGVRRCGPGGRSGCGGRRRCGYHCG*
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