mRNA_H-elongata_contig53767.12736.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: E1Z887_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z887_CHLVA) HSP 1 Score: 141 bits (355), Expect = 7.300e-37 Identity = 63/102 (61.76%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAVPVS NM+RLL+ G++VLLFPGGV+EAY ++GE Y++ WPEK+EF+R+AA FGATIVPF+A+G+ DSL ++ D +L +P+VGD LRR++ GLP AR
Sbjct: 620 FGAVPVSAFNMHRLLQAGESVLLFPGGVREAYKRRGEEYRLFWPEKSEFIRMAARFGATIVPFAAVGVDDSLNILADSQQLEAMPVVGDMLRRRAGGLPQAR 721
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A7S1HX58_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HX58_9EUGL) HSP 1 Score: 136 bits (343), Expect = 4.720e-36 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAV VS RN+Y LL + LLFPGGV+EAY KGE Y++IWP K EFVRLA+ FGATI+P SAIG D LEM+LD ++LL LP++G+ +RR++EG+PTAR
Sbjct: 216 FGAVGVSGRNLYDLLNGDEVALLFPGGVREAYKGKGEEYQLIWPTKPEFVRLASRFGATIIPLSAIGADDGLEMLLDSNDLLNLPVIGEQVRRRAEGIPTAR 317
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A7S0RX44_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RX44_9CHLO) HSP 1 Score: 129 bits (324), Expect = 1.120e-35 Identity = 57/102 (55.88%), Postives = 80/102 (78.43%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAVPV NM++LL G+ VLL+PGG +EA+ +K E YK++WPE+AEFVR+AA FGATI+PF+A+G D + VLDG +L LPI+G+S+R+++ +P AR
Sbjct: 15 FGAVPVGGFNMHKLLAGGEVVLLYPGGAREAFKRKDEKYKLLWPERAEFVRMAARFGATIIPFAAVGAEDGVNQVLDGRDLAALPIIGESIRKRASAVPQAR 116
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A2P6V1X8_9CHLO (Acyltransferase chloroplastic n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V1X8_9CHLO) HSP 1 Score: 137 bits (344), Expect = 2.250e-35 Identity = 62/102 (60.78%), Postives = 83/102 (81.37%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAVPVS NM+RLL G+ VLLFPGGV+EAY ++GE Y++ WPEK+EF+R+AA FGATIVPF+A+G+ DSL ++ D +L LP+VGD+LRR++ +P AR
Sbjct: 609 FGAVPVSGFNMHRLLASGEAVLLFPGGVREAYKRRGEDYQLFWPEKSEFIRMAARFGATIVPFAAVGVDDSLNIIADSTQLEALPVVGDALRRRAGSMPQAR 710
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A7S1HX56_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1HX56_9EUGL) HSP 1 Score: 136 bits (343), Expect = 3.190e-35 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAV VS RN+Y LL + LLFPGGV+EAY KGE Y++IWP K EFVRLA+ FGATI+P SAIG D LEM+LD ++LL LP++G+ +RR++EG+PTAR
Sbjct: 629 FGAVGVSGRNLYDLLNGDEVALLFPGGVREAYKGKGEEYQLIWPTKPEFVRLASRFGATIIPLSAIGADDGLEMLLDSNDLLNLPVIGEQVRRRAEGIPTAR 730
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A2P6TRL1_CHLSO (Acyltransferase chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TRL1_CHLSO) HSP 1 Score: 136 bits (342), Expect = 3.660e-35 Identity = 59/102 (57.84%), Postives = 84/102 (82.35%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAVPVS +NM+RLL+ + VLLFPGGV+EAY ++GE Y++ WPEK+EF+R+AA FGATIVPF+A+G+ DSL ++ D +L +P++GD ++R++ GLP AR
Sbjct: 519 FGAVPVSAKNMHRLLQNKEAVLLFPGGVREAYKRRGEEYQLFWPEKSEFIRMAARFGATIVPFAAVGVDDSLNIIADSQQLEAMPVLGDMVKRRAGGLPQAR 620
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A3M7KUL9_AUXPR (Hydrolase_4 domain-containing protein n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KUL9_AUXPR) HSP 1 Score: 135 bits (339), Expect = 6.820e-35 Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAV VSPRNM+RLL G+ +LLFPGG++EAY +GE Y++ WP+++EFVR+AA FGATIVPF+A+GI DSL ++LD ++ LP VGD+LRR+ LP AR
Sbjct: 432 FGAVRVSPRNMFRLLSNGEAILLFPGGMREAYKGRGEEYRLFWPDRSEFVRMAARFGATIVPFAAVGIDDSLNILLDPSQVQALPFVGDALRRRQALLPQAR 533
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A0K6S9U4_9ALVE (AB hydrolase-1 domain-containing protein n=2 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0K6S9U4_9ALVE) HSP 1 Score: 134 bits (337), Expect = 2.090e-34 Identity = 61/102 (59.80%), Postives = 79/102 (77.45%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAVPV+PRN RL++RGD +LFPGGV+E YH+KGE V+WP+ EFVRLAA + ATI+PFSAIG +DS ++LD +ELL++PI+GD LR + LP R
Sbjct: 778 FGAVPVTPRNFVRLMQRGDWAMLFPGGVREVYHRKGEKDAVVWPQSPEFVRLAARYNATIIPFSAIGSSDSFSLLLDTEELLKVPILGDRLRENAMKLPKVR 879
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A7S2QSI7_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2QSI7_9EUKA) HSP 1 Score: 129 bits (324), Expect = 1.170e-32 Identity = 57/102 (55.88%), Postives = 80/102 (78.43%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAVPVS RN+ L+R LLFPGGV+E YH+KGE YKV WP++ EF+R AA+ AT+VPFSAIG+ADS++MV D ++L+ P++GD+++++ + LP AR
Sbjct: 670 FGAVPVSGRNLDALMRERMPALLFPGGVREVYHRKGEDYKVFWPQRGEFIRAAAKHNATVVPFSAIGVADSVQMVADAQDILKTPVLGDNVKQRMQYLPRAR 771
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Match: A0A1Y1HUH4_KLENI (Esterase/lipase/thioesterase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUH4_KLENI) HSP 1 Score: 127 bits (320), Expect = 3.670e-32 Identity = 55/102 (53.92%), Postives = 80/102 (78.43%), Query Frame = 1
Query: 1 FGAVPVSPRNMYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIVPFSAIGIADSLEMVLDGDELLRLPIVGDSLRRQSEGLPTAR 306
FGAV + N+Y+LL+ D LL+PGGV+EAYH K EAY++ WP++ EFVR+A +FGATIVP + +G ADS++++L DE+L+LPI+GD +R+Q+E +P R
Sbjct: 517 FGAVNATGPNLYKLLQNRDAALLYPGGVREAYHGKNEAYQLFWPDQPEFVRMAIKFGATIVPIAGVGSADSIDLLLGPDEILKLPIIGDRVRKQAESIPNVR 618 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53767.12736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53767.12736.1 >prot_H-elongata_contig53767.12736.1 ID=prot_H-elongata_contig53767.12736.1|Name=mRNA_H-elongata_contig53767.12736.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp MYRLLRRGDNVLLFPGGVKEAYHKKGEAYKVIWPEKAEFVRLAAEFGATIback to top mRNA from alignment at H-elongata_contig53767:565..2383- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53767.12736.1 ID=mRNA_H-elongata_contig53767.12736.1|Name=mRNA_H-elongata_contig53767.12736.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1819bp|location=Sequence derived from alignment at H-elongata_contig53767:565..2383- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53767:565..2383- >mRNA_H-elongata_contig53767.12736.1 ID=mRNA_H-elongata_contig53767.12736.1|Name=mRNA_H-elongata_contig53767.12736.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at H-elongata_contig53767:565..2383- (Himanthalia elongata Himel1 dioecious)back to top |