mRNA_H-elongata_contig53539.12707.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: D8LBM5_ECTSI (Similar to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI) HSP 1 Score: 320 bits (819), Expect = 1.870e-100 Identity = 166/227 (73.13%), Postives = 192/227 (84.58%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDID-ACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDG--LAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAEAMLEKYGPYEKMTVRRAMMVVLQVIKEVL-EDEFSEERMELVCVDLSEGAPERGD 670
Q+EYA +AA+KGGL IGVQTD+GLVLAA GRRRSPLLK SSV KI D+D + CAMSGLLPDGR+L+D ARTWVQEHRFEFDEAPSVEAVAS LSRL LKF+GYDKDGK G G +E++DG AM+RPVGVALLMAGVDRG+RPVLYHLDP+GAYVQWRA+AIG+KG AAEA LE GP+E M+VRRAM VL V++EVL +DEFS +R+E+VCVD+ G GD
Sbjct: 51 QVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGGGRGSGD 277
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: UPI0002658A20 (proteasome subunit alpha type-5 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658A20) HSP 1 Score: 163 bits (413), Expect = 5.020e-43 Identity = 87/213 (40.85%), Postives = 134/213 (62.91%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAE-AMLEKYGPYEKMTVRRAMMVVLQVIKEVLEDEFSEERMELVCV 637
Q+EYA +A + G AIG+QT +G VLA + R SPL++ +++ KI +ID I CA+SGL+ D R ++D AR Q H F +DE+ VE+ A +S L +KF DDDG AM+RP GVA+L AG+D P L+H+DP+G YV++ AKAIG A+ A+ EKY ++ MT++ A+ +L ++K+V+E++ + +E+ +
Sbjct: 23 QVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLMESTTIEKIVEIDKFIGCAVSGLMADSRTMIDKARVEAQNHWFNYDESMRVESCAQAVSNLAIKF------------GDNDDDGTAMSRPFGVAILFAGIDEKKGPQLFHMDPSGTYVEFLAKAIGSGCEGAQQALQEKY--HKSMTLKEALKEILVILKQVMEEKLGVDNVEVATI 221
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: E9HGR7_DAPPU (Proteasome subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU) HSP 1 Score: 162 bits (411), Expect = 9.720e-43 Identity = 92/213 (43.19%), Postives = 133/213 (62.44%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAEAMLEKYGPYEK-MTVRRAMMVVLQVIKEVLEDEFSEERMELVCV 637
Q+EYA +A + G AIG+QT +G+VLA + R SPL++ +++ KI +ID I CA+SGL+ D R +VD AR Q H F +DE SVE+VA +S L ++F DDDG AM+RP GVA+L AG+D P L+H+DP+G YVQ+ AKAIG A+ L++ Y K MT++ AM L ++K+V+E++ S +E+ V
Sbjct: 23 QVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQF------------GDSDDDGNAMSRPFGVAILFAGIDEKG-PQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQE--AYNKSMTLKSAMKAALTILKQVMEEKLSSTNVEVAAV 220
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: A0A1V9XHX5_9ACAR (Proteasome subunit alpha type n=2 Tax=Dermanyssoidea TaxID=41438 RepID=A0A1V9XHX5_9ACAR) HSP 1 Score: 161 bits (408), Expect = 1.030e-41 Identity = 89/218 (40.83%), Postives = 136/218 (62.39%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAE-AMLEKYGPYEKMTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEG 652
Q+EYA +A + G AIG+QT +G VLA + R SPL++ +++ KI +ID I CA+SGL+ D R L+D AR Q H F ++E VE+ A +S L +KF G ++DDG AM+RP GVA+L AG+D P L+H+DP+G YV++ AKAIG A+ A+ EKY ++ +T++ A+ L ++K+V+E++ S +E+ V +G
Sbjct: 72 QVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLMEGTTIEKIVEIDNHIGCAVSGLMADSRTLIDRARVEAQNHWFLYNEKMHVESCAQAVSNLAIKF-----------GDSDNDDGAAMSRPFGVAILFAGIDSNRGPQLFHMDPSGTYVEFLAKAIGSGSEGAQQALQEKY--HKSLTLKEALKETLVILKQVMEEKLSSINVEVATVTKEKG 276
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: A0A1D1XX99_9ARAE (Proteasome subunit alpha type (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XX99_9ARAE) HSP 1 Score: 159 bits (403), Expect = 1.560e-41 Identity = 98/223 (43.95%), Postives = 137/223 (61.43%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAEAMLEKYGPYEK-MTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEGAPERG 667
Q+EYA +A + G A+G+QT +G+VLAA+ R SPLL SS+ KI +ID + CAMSGL D R ++D AR Q HRF +DEA VE+V + L L+F G S E ++ + M+RP GVALL+AGVD N P L+H DP+G + Q+ AKAIG A+ LE G Y K +T+ +A + L+V+K+V+E++ + +EL V PERG
Sbjct: 28 QVEYAIEAIKLGSTAVGIQTSEGVVLAAEKRVTSPLLVSSSIEKIMEIDKHLGCAMSGLTADSRTMIDHARVAAQSHRFTYDEAIKVESVTQAVCDLALRF----------GESAEGEESI-MSRPFGVALLIAGVDE-NGPQLFHADPSGTFTQFDAKAIGSGSEGAQTELE--GEYHKSITLEKAETLSLRVLKQVMEEKLNNTNVELASV-----TPERG 231
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: A0A7J7JUL7_BUGNE (Proteasome subunit alpha type n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JUL7_BUGNE) HSP 1 Score: 158 bits (399), Expect = 4.910e-41 Identity = 89/217 (41.01%), Postives = 136/217 (62.67%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAEAMLEKYGPYEKMTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEG 652
Q+EYA +A + G AIG+QT +G+VLA + R SPL++ S+ KI ++D+ + CAMSGL+ D R L+D AR Q H F +DE SVE+V +S L L F D D +PG AM+RP GVALL AG+D N P L+HLDP+G ++++ AKAIG A+ L+ ++ M + A+ V++++K+V+E++ + + +EL V ++G
Sbjct: 23 QVEYAIEAIKLGSTAIGLQTSEGVVLAVEKRVTSPLIEADSIEKIFEVDSHLGCAMSGLIADSRTLIDRARVEAQNHWFTYDEKMSVESVTQSVSNLALAFG--DDDAEPG----------AMSRPFGVALLFAGIDE-NGPQLFHLDPSGTFIRYDAKAIGSASEGAQQSLQDVF-HKSMNLETAIKEVMKILKQVMEEKLTSKNVELAIVTKADG 225
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: UPI0006B071AC (proteasome subunit alpha type-5-like n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B071AC) HSP 1 Score: 157 bits (398), Expect = 6.810e-41 Identity = 88/218 (40.37%), Postives = 135/218 (61.93%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAE-AMLEKYGPYEKMTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEG 652
Q+EYA +A + G AIG+QT +G++LA + R S L++ +++ KI +ID I CA+SGL+ D R +VD AR Q H F ++E VE+VA +S L ++F DDDG+AM+RP GVA+L AG+D P LYH+DP+G YVQ+ AKAIG A+ A+ E+Y ++ MT+ A L+++K+V+E++ + +E+ V +G
Sbjct: 23 QVEYAIEAIKLGSTAIGIQTSEGVMLAVEKRVTSTLMESTTIEKIVEIDTHIGCAVSGLMADSRTMVDKARVEAQNHWFLYNEKMQVESVAQAVSNLAIRF------------GDSDDDGIAMSRPFGVAILFAGIDERG-PQLYHMDPSGTYVQYDAKAIGSGSEGAQQALQEEY--HKSMTLEEASKTALKILKQVMEEKLNSTNIEVAAVTPDKG 225
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: A0A1X6NLH8_PORUM (Proteasome subunit alpha type n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLH8_PORUM) HSP 1 Score: 157 bits (398), Expect = 7.630e-41 Identity = 94/217 (43.32%), Postives = 127/217 (58.53%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAEAMLEKYGPYEKMTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEG 652
Q+EYA +A + G A+G+ T +G++LA + R SPLL SS+ K+ +ID I AMSGL D R L+D R QEHRF +DE SVE+ L L L+F +DG+ DD AMARP GVALL+AGVD P LYH DP+G YV+W AKAIG A+ L++ MT+ A + L+ +K V+E++ S E +E+ V G
Sbjct: 23 QVEYAIEAIKLGSTAVGICTTEGVILAVEKRLTSPLLTPSSIEKVLEIDTHIGAAMSGLTADARTLIDHGRIVTQEHRFTYDEPLSVESTTQSLCDLALRF---GEDGR-------DDGADAMARPFGVALLIAGVDDEGGPALYHTDPSGTYVKWMAKAIGAGSEGAQTALQEAWS-AGMTLAEAEGLALKTLKAVMEEKVSGENVEVAAVTAESG 228
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: A0A5J4Z0C5_PORPP (Proteasome subunit alpha type n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0C5_PORPP) HSP 1 Score: 157 bits (397), Expect = 1.180e-40 Identity = 97/240 (40.42%), Postives = 144/240 (60.00%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAEAMLEKYGPYEK-MTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEGAPERGDIDSLSMEDIRCNFQRL 718
Q+EYA +A + G AIG++T+QG+VLA + R SPLL+ SV K+ ID+ I CAMSGL D R L+D AR Q HRF +DE +++ A + L L+F +DGK E+D AM+RP GVALL+AG+D G +P L H DP+G YV+W AKAIG A+ L++ + K +T++ A ++ L+ +K+V+E E++ V++ E G+ S E++ +RL
Sbjct: 29 QVEYAIEAIKLGSTAIGIKTEQGVVLAVEKRLTSPLLEPRSVEKLVVIDSQIGCAMSGLTADARTLIDHARVETQSHRFTYDEPMQIDSCAQAICDLALQF---GEDGK------EED---AMSRPFGVALLIAGIDVGGKPSLIHTDPSGTYVKWDAKAIGAGSEGAQTALQE--AFSKTLTLQEAEVLALRTLKQVME-----EKLNKTNVEIGAALVETGEFRVYSSEELEACIERL 249
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Match: A0A6P7VHU3_IXOSC (Proteasome subunit alpha type n=20 Tax=Ixodoidea TaxID=297308 RepID=A0A6P7VHU3_IXOSC) HSP 1 Score: 157 bits (396), Expect = 1.310e-40 Identity = 91/218 (41.74%), Postives = 135/218 (61.93%), Query Frame = 2
Query: 2 QIEYATQAAEKGGLAIGVQTDQGLVLAAQGRRRSPLLKRSSVCKINDIDACITCAMSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDKDGKPGGGSKEDDDGLAMARPVGVALLMAGVDRGNRPVLYHLDPTGAYVQWRAKAIGEKGVAAE-AMLEKYGPYEKMTVRRAMMVVLQVIKEVLEDEFSEERMELVCVDLSEG 652
Q+EYA +A + G AIG+QT +G+VLA + R SPL++ +++ KI +ID I CA+SGL+ D R +VD AR Q H F ++E VE+VA +S L ++F DDDG AM+RP GVA+L AG+D P LYH+DP+G YVQ+ AKAIG A+ A+ EKY ++ MT++ A L ++K+V+E++ + +E+ V +G
Sbjct: 23 QVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTSPLMEPTTIEKIVEIDNHIGCAVSGLMADSRTMVDRARVEAQNHWFLYNEKMQVESVAQAVSNLAIQF------------GDSDDDGNAMSRPFGVAILFAGIDPKG-PQLYHMDPSGTYVQYDAKAIGSGSEGAQQALQEKY--HKSMTLKEATQDALTILKQVMEEKLNSTNVEVANVTKEKG 225 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53539.12707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53539.12707.1 >prot_H-elongata_contig53539.12707.1 ID=prot_H-elongata_contig53539.12707.1|Name=mRNA_H-elongata_contig53539.12707.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=256bp MSGLLPDGRMLVDCARTWVQEHRFEFDEAPSVEAVASYLSRLTLKFHGYDback to top mRNA from alignment at H-elongata_contig53539:488..3314+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53539.12707.1 ID=mRNA_H-elongata_contig53539.12707.1|Name=mRNA_H-elongata_contig53539.12707.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2827bp|location=Sequence derived from alignment at H-elongata_contig53539:488..3314+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53539:488..3314+ >mRNA_H-elongata_contig53539.12707.1 ID=mRNA_H-elongata_contig53539.12707.1|Name=mRNA_H-elongata_contig53539.12707.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1536bp|location=Sequence derived from alignment at H-elongata_contig53539:488..3314+ (Himanthalia elongata Himel1 dioecious)back to top |