mRNA_H-elongata_contig53488.12693.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: D8LQL6_ECTSI (Mercuric reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL6_ECTSI) HSP 1 Score: 489 bits (1259), Expect = 3.250e-169 Identity = 243/278 (87.41%), Postives = 263/278 (94.60%), Query Frame = 1
Query: 16 DASIDAQAMKIIAELKAGTKTIADLLGPLTGTPDMTPSIKVRPGTKDPVPAAPQAEFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
+ S+DAQA++IIAELKAGTKTIADLLGPLTGT DMTP+I +RPG+KDPVPAAPQAEFLPKD YN KLV+NVGPTDYVNP+PLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC ALIACATRLH+V++SAE+GVE+ GEV VDF KVM+RMRR+RSDISEHDSVARYSRDFVKHI+LGRGVFTS +TIEVAGKKLKFDKAMVATGASAAVPPVPGLKD PHLTNSNFWNLEELPPRMGVIGAGPIGLE+SQ+MQR GCKVT
Sbjct: 7 EGSVDAQALEIIAELKAGTKTIADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQHSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRLGCKVT 284
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S2UXV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV1_9STRA) HSP 1 Score: 347 bits (891), Expect = 1.590e-113 Identity = 170/276 (61.59%), Postives = 218/276 (78.99%), Query Frame = 1
Query: 25 IDAQAMKIIAELKAGTKTIADLLGPLTGTPDMTPSIKVRPGTKDPVPAAPQAEFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVEL-SGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
++A+A+ I+ +LK G K+I+DLLGPL G ++TP+I +RPGT VP AP+A P D +NT LV NV P Y NP+P E YDLVVIG+G +GLLSVI+ LGK CA++E+ MGGDCLN+GC ALI+CA R ++V+NSAE+GV L GEV++DF VM RMR+IR+ ISEHDSVARY+RDF +HI+LG FT +++IEVAGK L F KAM+ATGASA++ P+PGLKD PHLTN+NF+NL ELPPR+ VIG GPIGLE++QS+QRFGC+VT
Sbjct: 11 VEAEALHILEDLKNGKKSISDLLGPLYGDRELTPTINLRPGTTAEVPVAPEAHVSPMDEHNTHLVDNVHPPTYENPEPREDYDLVVIGAGVSGLLSVIMGKALGKRCAMIEKQYMGGDCLNIGCVPSKALISCARRFNEVKNSAEFGVILPEGEVRIDFGHVMARMRKIRASISEHDSVARYARDFCEHIFLGHARFTGDHSIEVAGKTLNFKKAMIATGASASIVPIPGLKDTPHLTNANFFNLTELPPRLSVIGCGPIGLEMAQSLQRFGCQVT 286
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S3XS08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS08_HETAK) HSP 1 Score: 290 bits (742), Expect = 8.110e-92 Identity = 144/223 (64.57%), Postives = 178/223 (79.82%), Query Frame = 1
Query: 196 DAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVEL-SGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKK----LKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
D +NTKLV NV PTDY NP+PLEKYDLVV+G+G +GLLSVI+ + LGK CAL+E+H MGGDCLN+GC ALI+CA RL +V+ SAE+GV L GEV +DF VM RMRRIR+ IS+HDSVARYSRDF +H++LG F +T+ V+G L+FDKAMVATGASAA+ P+PGL PHLTN+NF+NL ELPPR+ VIGAGPIGLE++QS++RFG +VT
Sbjct: 2 DEHNTKLVNNVHPTDYQNPEPLEKYDLVVLGAGVSGLLSVIMGSALGKKCALIEKHYMGGDCLNIGCVPSKALISCARRLKEVQESAEFGVRLPEGEVTIDFGAVMARMRRIRAAISDHDSVARYSRDFCEHVFLGHAEFAGPDTVRVSGANGDVTLRFDKAMVATGASAAIVPIPGLVGAPHLTNANFFNLTELPPRVAVIGAGPIGLEMAQSLRRFGAQVT 224
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S2SRP0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRP0_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.440e-83 Identity = 136/226 (60.18%), Postives = 168/226 (74.34%), Query Frame = 1
Query: 184 FLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVEL-SGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKK--LKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
P+D YNT VA + P + VNP P E YDLVVIG+G AGLLSVI A LGK AL+E+H MGGDCLNVGC A+I CA +HDV+ SA +GV L GEV+VDF VMQRMR +R+ I+ HD V RY RDF I++G FT NTI V G + + F+KAMVATGASAA+PP+PGL+ +PHLTN++F+NLEELPPRM +IGAGPIG+EL+Q+M R G +VT+
Sbjct: 1 MAPEDEYNTAAVAAIHPPERVNPTPKESYDLVVIGAGVAGLLSVICAKALGKRAALIERHYMGGDCLNVGCFPSKAIIRCARAVHDVKTSARFGVILPEGEVRVDFGAVMQRMRMLRASIAPHDGVERYCRDFCDDIFIGDAKFTGPNTITVEGMEQPIVFEKAMVATGASAAIPPIPGLRSVPHLTNNDFFNLEELPPRMCLIGAGPIGIELAQTMARLGSEVTI 226
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A835ZL58_9STRA (Mercuric reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL58_9STRA) HSP 1 Score: 265 bits (677), Expect = 4.610e-81 Identity = 152/305 (49.84%), Postives = 200/305 (65.57%), Query Frame = 1
Query: 16 DASIDAQAMKIIAELKAGTKTIADLLGPLTGT----------PDMTPSIKVRPGTKDPVPAAPQAEFLP-KDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGE-VKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAG-----KKLKFDKAMVATGASAAVPPVPGLKD----------IPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
DA ++A A++++ +LKAG +ADLLGPL G P TP +V AA +A LP +D +N LV NV P DYVNP P + YDLVVIG+G +GLLSVI+A GLG CALVE+H MGGDCLNVGC ALIACA R+HDVR +A +GV L + V+VDF +M+RMR IR++IS D VARY+RDF +H++LG+ F+ +++ V+G + L+F KAM+ATG S +P+L+N+NF+NLEELPPR+ V+GAGPIGLEL+QSM R G +VT
Sbjct: 3 DAGVEAAALQLLVDLKAGKVAMADLLGPLHGPRTGLTTGGAPPPPTPQPQVNAAD---FAAAEEAPALPAEDKFNKALVDNVHPPDYVNPAPSDCYDLVVIGAGVSGLLSVIMAKGLGMRCALVERHYMGGDCLNVGCVPSKALIACARRVHDVRTAAPFGVRLRADAVEVDFPAIMERMRAIRAEISAADGVARYARDFCEHVFLGQATFSGAHSVIVSGGAAGDRVLRFRKAMIATGGSXXXXXXXXXXXXXXXXXXXGGVPYLSNANFFNLEELPPRLCVVGAGPIGLELAQSMARLGSRVT 304
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S4A7W2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7W2_9STRA) HSP 1 Score: 250 bits (639), Expect = 2.210e-75 Identity = 146/289 (50.52%), Postives = 191/289 (66.09%), Query Frame = 1
Query: 19 ASIDAQAMKIIAELKAGTKTIADLLGPLTG---TPDMTPSIKVRPGTKDPVPAAPQAEFLPK-DAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCA----LIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEV-----AGKK--LKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
A+++A+A K++A L AGT++I D+LG L G +PD+ K PG+ V AP+ P D + + VGP ++ P +KYDLVVIG+G AGLLSVI A LGK L+E+H MGGDCLNVGC L+A A L R +A+ GV + V +DF +VM+RMR IR I+ HD VARY RDF + +G F SE + + +G+K + FD+ MVATGASAAVPP PGL + PHLTN NF+NLE LPP +G+IGAGPIGLE++QS+QRFGC+VTV
Sbjct: 49 AALEAEAAKLLAALDAGTQSIDDVLGRLYGKAASPDVQIP-KAAPGSTMAV--APEYALGPSTDPIVQETIDYVGPKNHF-PSLDKKYDLVVIGAGVAGLLSVITAKALGKRALLIEKHYMGGDCLNVGCVPSKCLVAAAKALQSCRKAAKLGVMGADNVSIDFPRVMKRMRDIRGGIAPHDGVARYGRDFCAAVIIGEAAFASETEVVITARDGSGRKQTVAFDRCMVATGASAAVPPAPGLLETPHLTNGNFFNLEALPPTLGLIGAGPIGLEMAQSLQRFGCQVTV 333
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: W4LUV9_9BACT (DEP domain-containing protein n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4LUV9_9BACT) HSP 1 Score: 245 bits (626), Expect = 3.890e-73 Identity = 128/263 (48.67%), Postives = 174/263 (66.16%), Query Frame = 1
Query: 82 ADLLGPLTGTPDMTPSIKVRPGTKDPVPAAPQAEFL------PKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
AD + P+T D S++ +DP A + L P D +N KL+ P +VNP P Y+LVVIG+G GL+S + GLG AL+E H +GGDCLNVGC AL+ CA VR++AE+GV + G + VDF VM+RMRR+R+ I+ +DSV R++ D +++GRG FT +NTIEV G L F KA++ATG +AA+PP+PGL + P+LTN+ +NL ELPPR+GVIGAGPIGLE++Q+ QRFG +VTV
Sbjct: 120 ADFIAPITSDEDAVVSLQPSMPDRDPDLAQFAQDDLDHLNISPLDTHNAKLLDLTHPKSWVNPAPKASYNLVVIGAGTGGLVSAAGSAGLGARVALIEAHLLGGDCLNVGCVPSKALLRCAKAAVAVRHAAEFGVRVDGNISVDFGYVMERMRRLRASIAPNDSVKRFTEDVGVDMFMGRGRFTGKNTIEVNGDVLHFSKAVIATGGTAAIPPIPGLAEAPYLTNATLFNLTELPPRLGVIGAGPIGLEMAQAFQRFGSQVTV 382
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: F0Y060_AURAN (Uncharacterized protein MER2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y060_AURAN) HSP 1 Score: 242 bits (618), Expect = 5.220e-73 Identity = 123/217 (56.68%), Postives = 159/217 (73.27%), Query Frame = 1
Query: 217 VANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAG-----KKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
VA+VGP + P+ EKYDLVVIG+G AGLLSVI+A LGK L+E+H MGGDCLNVGC ALIACA + H+++++A++GV +SG+V VDF VM+RMR +R+ I+ HD V RY RDF + +G F S + + + + FDK M+ATGASAAV PVPGL+D PHLTN NF+NLE LPPR +IGAGPIG+E++QS+QRFGC VT+
Sbjct: 13 VAHVGPKAHF-PKLKEKYDLVVIGAGVAGLLSVIVAKSLGKKALLIEKHYMGGDCLNVGCFPSKALIACARKCHELKHAADFGVTVSGDVTVDFGFVMKRMRALRAGIAPHDGVERYGRDFCDDVCVGVAKFASPTEVVITSHGGETQSVAFDKCMIATGASAAVVPVPGLRDCPHLTNGNFFNLEALPPRACLIGAGPIGIEMAQSLQRFGCAVTI 228
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A5C6BQD3_9PLAN (Mercuric reductase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A5C6BQD3_9PLAN) HSP 1 Score: 239 bits (610), Expect = 2.890e-72 Identity = 122/224 (54.46%), Postives = 159/224 (70.98%), Query Frame = 1
Query: 181 EFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
E LP D+YN +LVANV P+D+ NPQP +Y LV+IG+G AGL++ I A GLG AL+E++ MGGDCLNVGC ALI + +R +AE+GV +SGEV VDF VMQRMRR+R++IS HDS AR+ RD ++LG+G FTS + IEV G+ L F KA++ATG A +PP+PGL D+ +LTN + L ELP R+ VIG GPIG E+ Q+ RFG VT+
Sbjct: 6 EVLPADSYNAELVANVHPSDWKNPQPQPRYHLVIIGAGTAGLVAAIGAAGLGAKVALIERNLMGGDCLNVGCVPSKALIRSSRVAAQIRRAAEFGVNVSGEVTVDFPAVMQRMRRLRAEISPHDSAARF-RDNGVDVFLGQGAFTSSDKIEVDGQTLNFKKAVIATGGRAVMPPIPGLDDVAYLTNETLFTLTELPRRLAVIGGGPIGCEMVQAFARFGSHVTL 228
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A525D6D9_9DELT (FAD-containing oxidoreductase (Fragment) n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A525D6D9_9DELT) HSP 1 Score: 241 bits (615), Expect = 4.530e-72 Identity = 127/265 (47.92%), Postives = 174/265 (65.66%), Query Frame = 1
Query: 82 ADLLGPLTGTP---DMTPSIKVRPGTKDPVPAAPQAEFL-----PKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
AD LG +T P + P I PG + Q + P D +N L+ NV P +++P P E Y+LVVIG GA GL++ A G+G A++E H +GGDCLNVGC AL+ CA VR++A++G+++ GEV++DF +VM+R+R++R++IS DS RYS +Y+GR VFTS T+EV GK LKF KA+VATG +AA+P +PGL + P+LTNS +NL ELP R GVIGAGPIG+EL+Q+ QR G +VTV
Sbjct: 59 ADFLGKITSPPGDESLQPGI---PGPDADLGDMAQDDLAAVGVTPLDEHNATLLDNVHPKKWLDPDPKEPYNLVVIGGGAGGLITAAGAAGVGARVAIIESHLLGGDCLNVGCVPSKALLRCAKAAASVRDAADFGIQIDGEVRIDFGQVMERLRKLRAEISAVDSAKRYSEQLGVDVYIGRAVFTSPTTVEVNGKTLKFAKAVVATGGTAAIPNIPGLAEAPYLTNSTIFNLTELPERFGVIGAGPIGMELAQAFQRLGSQVTV 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53488.12693.1 >prot_H-elongata_contig53488.12693.1 ID=prot_H-elongata_contig53488.12693.1|Name=mRNA_H-elongata_contig53488.12693.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp MAVSHDASIDAQAMKIIAELKAGTKTIADLLGPLTGTPDMTPSIKVRPGTback to top mRNA from alignment at H-elongata_contig53488:224..3282- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53488.12693.1 ID=mRNA_H-elongata_contig53488.12693.1|Name=mRNA_H-elongata_contig53488.12693.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3059bp|location=Sequence derived from alignment at H-elongata_contig53488:224..3282- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53488:224..3282- >mRNA_H-elongata_contig53488.12693.1 ID=mRNA_H-elongata_contig53488.12693.1|Name=mRNA_H-elongata_contig53488.12693.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1680bp|location=Sequence derived from alignment at H-elongata_contig53488:224..3282- (Himanthalia elongata Himel1 dioecious)back to top |