mRNA_H-elongata_contig53488.12693.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig53488.12693.1
Unique NamemRNA_H-elongata_contig53488.12693.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: D8LQL6_ECTSI (Mercuric reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL6_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 3.250e-169
Identity = 243/278 (87.41%), Postives = 263/278 (94.60%), Query Frame = 1
Query:   16 DASIDAQAMKIIAELKAGTKTIADLLGPLTGTPDMTPSIKVRPGTKDPVPAAPQAEFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
            + S+DAQA++IIAELKAGTKTIADLLGPLTGT DMTP+I +RPG+KDPVPAAPQAEFLPKD YN KLV+NVGPTDYVNP+PLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC    ALIACATRLH+V++SAE+GVE+ GEV VDF KVM+RMRR+RSDISEHDSVARYSRDFVKHI+LGRGVFTS +TIEVAGKKLKFDKAMVATGASAAVPPVPGLKD PHLTNSNFWNLEELPPRMGVIGAGPIGLE+SQ+MQR GCKVT
Sbjct:    7 EGSVDAQALEIIAELKAGTKTIADLLGPLTGTKDMTPAINIRPGSKDPVPAAPQAEFLPKDDYNVKLVSNVGPTDYVNPEPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCVPSKALIACATRLHEVQHSAEFGVEIKGEVGVDFGKVMKRMRRVRSDISEHDSVARYSRDFVKHIFLGRGVFTSADTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDTPHLTNSNFWNLEELPPRMGVIGAGPIGLEMSQAMQRLGCKVT 284          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S2UXV1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV1_9STRA)

HSP 1 Score: 347 bits (891), Expect = 1.590e-113
Identity = 170/276 (61.59%), Postives = 218/276 (78.99%), Query Frame = 1
Query:   25 IDAQAMKIIAELKAGTKTIADLLGPLTGTPDMTPSIKVRPGTKDPVPAAPQAEFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVEL-SGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
            ++A+A+ I+ +LK G K+I+DLLGPL G  ++TP+I +RPGT   VP AP+A   P D +NT LV NV P  Y NP+P E YDLVVIG+G +GLLSVI+   LGK CA++E+  MGGDCLN+GC    ALI+CA R ++V+NSAE+GV L  GEV++DF  VM RMR+IR+ ISEHDSVARY+RDF +HI+LG   FT +++IEVAGK L F KAM+ATGASA++ P+PGLKD PHLTN+NF+NL ELPPR+ VIG GPIGLE++QS+QRFGC+VT
Sbjct:   11 VEAEALHILEDLKNGKKSISDLLGPLYGDRELTPTINLRPGTTAEVPVAPEAHVSPMDEHNTHLVDNVHPPTYENPEPREDYDLVVIGAGVSGLLSVIMGKALGKRCAMIEKQYMGGDCLNIGCVPSKALISCARRFNEVKNSAEFGVILPEGEVRIDFGHVMARMRKIRASISEHDSVARYARDFCEHIFLGHARFTGDHSIEVAGKTLNFKKAMIATGASASIVPIPGLKDTPHLTNANFFNLTELPPRLSVIGCGPIGLEMAQSLQRFGCQVT 286          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S3XS08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS08_HETAK)

HSP 1 Score: 290 bits (742), Expect = 8.110e-92
Identity = 144/223 (64.57%), Postives = 178/223 (79.82%), Query Frame = 1
Query:  196 DAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVEL-SGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKK----LKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
            D +NTKLV NV PTDY NP+PLEKYDLVV+G+G +GLLSVI+ + LGK CAL+E+H MGGDCLN+GC    ALI+CA RL +V+ SAE+GV L  GEV +DF  VM RMRRIR+ IS+HDSVARYSRDF +H++LG   F   +T+ V+G      L+FDKAMVATGASAA+ P+PGL   PHLTN+NF+NL ELPPR+ VIGAGPIGLE++QS++RFG +VT
Sbjct:    2 DEHNTKLVNNVHPTDYQNPEPLEKYDLVVLGAGVSGLLSVIMGSALGKKCALIEKHYMGGDCLNIGCVPSKALISCARRLKEVQESAEFGVRLPEGEVTIDFGAVMARMRRIRAAISDHDSVARYSRDFCEHVFLGHAEFAGPDTVRVSGANGDVTLRFDKAMVATGASAAIVPIPGLVGAPHLTNANFFNLTELPPRVAVIGAGPIGLEMAQSLRRFGAQVT 224          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S2SRP0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRP0_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.440e-83
Identity = 136/226 (60.18%), Postives = 168/226 (74.34%), Query Frame = 1
Query:  184 FLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVEL-SGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKK--LKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
              P+D YNT  VA + P + VNP P E YDLVVIG+G AGLLSVI A  LGK  AL+E+H MGGDCLNVGC    A+I CA  +HDV+ SA +GV L  GEV+VDF  VMQRMR +R+ I+ HD V RY RDF   I++G   FT  NTI V G +  + F+KAMVATGASAA+PP+PGL+ +PHLTN++F+NLEELPPRM +IGAGPIG+EL+Q+M R G +VT+
Sbjct:    1 MAPEDEYNTAAVAAIHPPERVNPTPKESYDLVVIGAGVAGLLSVICAKALGKRAALIERHYMGGDCLNVGCFPSKAIIRCARAVHDVKTSARFGVILPEGEVRVDFGAVMQRMRMLRASIAPHDGVERYCRDFCDDIFIGDAKFTGPNTITVEGMEQPIVFEKAMVATGASAAIPPIPGLRSVPHLTNNDFFNLEELPPRMCLIGAGPIGIELAQTMARLGSEVTI 226          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A835ZL58_9STRA (Mercuric reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL58_9STRA)

HSP 1 Score: 265 bits (677), Expect = 4.610e-81
Identity = 152/305 (49.84%), Postives = 200/305 (65.57%), Query Frame = 1
Query:   16 DASIDAQAMKIIAELKAGTKTIADLLGPLTGT----------PDMTPSIKVRPGTKDPVPAAPQAEFLP-KDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGE-VKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAG-----KKLKFDKAMVATGASAAVPPVPGLKD----------IPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVT 837
            DA ++A A++++ +LKAG   +ADLLGPL G           P  TP  +V         AA +A  LP +D +N  LV NV P DYVNP P + YDLVVIG+G +GLLSVI+A GLG  CALVE+H MGGDCLNVGC    ALIACA R+HDVR +A +GV L  + V+VDF  +M+RMR IR++IS  D VARY+RDF +H++LG+  F+  +++ V+G     + L+F KAM+ATG S                     +P+L+N+NF+NLEELPPR+ V+GAGPIGLEL+QSM R G +VT
Sbjct:    3 DAGVEAAALQLLVDLKAGKVAMADLLGPLHGPRTGLTTGGAPPPPTPQPQVNAAD---FAAAEEAPALPAEDKFNKALVDNVHPPDYVNPAPSDCYDLVVIGAGVSGLLSVIMAKGLGMRCALVERHYMGGDCLNVGCVPSKALIACARRVHDVRTAAPFGVRLRADAVEVDFPAIMERMRAIRAEISAADGVARYARDFCEHVFLGQATFSGAHSVIVSGGAAGDRVLRFRKAMIATGGSXXXXXXXXXXXXXXXXXXXGGVPYLSNANFFNLEELPPRLCVVGAGPIGLELAQSMARLGSRVT 304          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A7S4A7W2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7W2_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.210e-75
Identity = 146/289 (50.52%), Postives = 191/289 (66.09%), Query Frame = 1
Query:   19 ASIDAQAMKIIAELKAGTKTIADLLGPLTG---TPDMTPSIKVRPGTKDPVPAAPQAEFLPK-DAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGCA----LIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEV-----AGKK--LKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
            A+++A+A K++A L AGT++I D+LG L G   +PD+    K  PG+   V  AP+    P  D    + +  VGP ++  P   +KYDLVVIG+G AGLLSVI A  LGK   L+E+H MGGDCLNVGC     L+A A  L   R +A+ GV  +  V +DF +VM+RMR IR  I+ HD VARY RDF   + +G   F SE  + +     +G+K  + FD+ MVATGASAAVPP PGL + PHLTN NF+NLE LPP +G+IGAGPIGLE++QS+QRFGC+VTV
Sbjct:   49 AALEAEAAKLLAALDAGTQSIDDVLGRLYGKAASPDVQIP-KAAPGSTMAV--APEYALGPSTDPIVQETIDYVGPKNHF-PSLDKKYDLVVIGAGVAGLLSVITAKALGKRALLIEKHYMGGDCLNVGCVPSKCLVAAAKALQSCRKAAKLGVMGADNVSIDFPRVMKRMRDIRGGIAPHDGVARYGRDFCAAVIIGEAAFASETEVVITARDGSGRKQTVAFDRCMVATGASAAVPPAPGLLETPHLTNGNFFNLEALPPTLGLIGAGPIGLEMAQSLQRFGCQVTV 333          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: W4LUV9_9BACT (DEP domain-containing protein n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4LUV9_9BACT)

HSP 1 Score: 245 bits (626), Expect = 3.890e-73
Identity = 128/263 (48.67%), Postives = 174/263 (66.16%), Query Frame = 1
Query:   82 ADLLGPLTGTPDMTPSIKVRPGTKDPVPAAPQAEFL------PKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
            AD + P+T   D   S++     +DP  A    + L      P D +N KL+    P  +VNP P   Y+LVVIG+G  GL+S   + GLG   AL+E H +GGDCLNVGC    AL+ CA     VR++AE+GV + G + VDF  VM+RMRR+R+ I+ +DSV R++ D    +++GRG FT +NTIEV G  L F KA++ATG +AA+PP+PGL + P+LTN+  +NL ELPPR+GVIGAGPIGLE++Q+ QRFG +VTV
Sbjct:  120 ADFIAPITSDEDAVVSLQPSMPDRDPDLAQFAQDDLDHLNISPLDTHNAKLLDLTHPKSWVNPAPKASYNLVVIGAGTGGLVSAAGSAGLGARVALIEAHLLGGDCLNVGCVPSKALLRCAKAAVAVRHAAEFGVRVDGNISVDFGYVMERMRRLRASIAPNDSVKRFTEDVGVDMFMGRGRFTGKNTIEVNGDVLHFSKAVIATGGTAAIPPIPGLAEAPYLTNATLFNLTELPPRLGVIGAGPIGLEMAQAFQRFGSQVTV 382          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: F0Y060_AURAN (Uncharacterized protein MER2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y060_AURAN)

HSP 1 Score: 242 bits (618), Expect = 5.220e-73
Identity = 123/217 (56.68%), Postives = 159/217 (73.27%), Query Frame = 1
Query:  217 VANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAG-----KKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
            VA+VGP  +  P+  EKYDLVVIG+G AGLLSVI+A  LGK   L+E+H MGGDCLNVGC    ALIACA + H+++++A++GV +SG+V VDF  VM+RMR +R+ I+ HD V RY RDF   + +G   F S   + +       + + FDK M+ATGASAAV PVPGL+D PHLTN NF+NLE LPPR  +IGAGPIG+E++QS+QRFGC VT+
Sbjct:   13 VAHVGPKAHF-PKLKEKYDLVVIGAGVAGLLSVIVAKSLGKKALLIEKHYMGGDCLNVGCFPSKALIACARKCHELKHAADFGVTVSGDVTVDFGFVMKRMRALRAGIAPHDGVERYGRDFCDDVCVGVAKFASPTEVVITSHGGETQSVAFDKCMIATGASAAVVPVPGLRDCPHLTNGNFFNLEALPPRACLIGAGPIGIEMAQSLQRFGCAVTI 228          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A5C6BQD3_9PLAN (Mercuric reductase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A5C6BQD3_9PLAN)

HSP 1 Score: 239 bits (610), Expect = 2.890e-72
Identity = 122/224 (54.46%), Postives = 159/224 (70.98%), Query Frame = 1
Query:  181 EFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
            E LP D+YN +LVANV P+D+ NPQP  +Y LV+IG+G AGL++ I A GLG   AL+E++ MGGDCLNVGC    ALI  +     +R +AE+GV +SGEV VDF  VMQRMRR+R++IS HDS AR+ RD    ++LG+G FTS + IEV G+ L F KA++ATG  A +PP+PGL D+ +LTN   + L ELP R+ VIG GPIG E+ Q+  RFG  VT+
Sbjct:    6 EVLPADSYNAELVANVHPSDWKNPQPQPRYHLVIIGAGTAGLVAAIGAAGLGAKVALIERNLMGGDCLNVGCVPSKALIRSSRVAAQIRRAAEFGVNVSGEVTVDFPAVMQRMRRLRAEISPHDSAARF-RDNGVDVFLGQGAFTSSDKIEVDGQTLNFKKAVIATGGRAVMPPIPGLDDVAYLTNETLFTLTELPRRLAVIGGGPIGCEMVQAFARFGSHVTL 228          
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Match: A0A525D6D9_9DELT (FAD-containing oxidoreductase (Fragment) n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A525D6D9_9DELT)

HSP 1 Score: 241 bits (615), Expect = 4.530e-72
Identity = 127/265 (47.92%), Postives = 174/265 (65.66%), Query Frame = 1
Query:   82 ADLLGPLTGTP---DMTPSIKVRPGTKDPVPAAPQAEFL-----PKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAAGLLSVIIANGLGKTCALVEQHAMGGDCLNVGC----ALIACATRLHDVRNSAEYGVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVFTSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEELPPRMGVIGAGPIGLELSQSMQRFGCKVTV 840
            AD LG +T  P    + P I   PG    +    Q +       P D +N  L+ NV P  +++P P E Y+LVVIG GA GL++   A G+G   A++E H +GGDCLNVGC    AL+ CA     VR++A++G+++ GEV++DF +VM+R+R++R++IS  DS  RYS      +Y+GR VFTS  T+EV GK LKF KA+VATG +AA+P +PGL + P+LTNS  +NL ELP R GVIGAGPIG+EL+Q+ QR G +VTV
Sbjct:   59 ADFLGKITSPPGDESLQPGI---PGPDADLGDMAQDDLAAVGVTPLDEHNATLLDNVHPKKWLDPDPKEPYNLVVIGGGAGGLITAAGAAGVGARVAIIESHLLGGDCLNVGCVPSKALLRCAKAAASVRDAADFGIQIDGEVRIDFGQVMERLRKLRAEISAVDSAKRYSEQLGVDVYIGRAVFTSPTTVEVNGKTLKFAKAVVATGGTAAIPNIPGLAEAPYLTNSTIFNLTELPERFGVIGAGPIGMELAQAFQRLGSQVTV 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53488.12693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQL6_ECTSI3.250e-16987.41Mercuric reductase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A7S2UXV1_9STRA1.590e-11361.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XS08_HETAK8.110e-9264.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SRP0_9STRA1.440e-8360.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZL58_9STRA4.610e-8149.84Mercuric reductase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S4A7W2_9STRA2.210e-7550.52Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
W4LUV9_9BACT3.890e-7348.67DEP domain-containing protein n=2 Tax=Candidatus E... [more]
F0Y060_AURAN5.220e-7356.68Uncharacterized protein MER2 n=1 Tax=Aureococcus a... [more]
A0A5C6BQD3_9PLAN2.890e-7254.46Mercuric reductase n=3 Tax=Symmachiella TaxID=2795... [more]
A0A525D6D9_9DELT4.530e-7247.92FAD-containing oxidoreductase (Fragment) n=1 Tax=D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53488contigH-elongata_contig53488:224..3282 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.7
Seed ortholog evalue4.4e-136
Seed eggNOG ortholog2880.D8LQL6
EggNOG free text desc.dihydrolipoyl dehydrogenase activity
EggNOG OGsCOG1249@1,KOG1335@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size840
Cds size840
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53488.12693.1prot_H-elongata_contig53488.12693.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig53488 224..3282 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930871.6237457-CDS-H-elongata_contig53488:223..4121622930871.6237457-CDS-H-elongata_contig53488:223..412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 224..412 -
1691679605.9220161-CDS-H-elongata_contig53488:223..4121691679605.9220161-CDS-H-elongata_contig53488:223..412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 224..412 -
1622930871.6386762-CDS-H-elongata_contig53488:564..6811622930871.6386762-CDS-H-elongata_contig53488:564..681Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 565..681 -
1691679605.9380383-CDS-H-elongata_contig53488:564..6811691679605.9380383-CDS-H-elongata_contig53488:564..681Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 565..681 -
1622930871.6548622-CDS-H-elongata_contig53488:1005..11431622930871.6548622-CDS-H-elongata_contig53488:1005..1143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 1006..1143 -
1691679605.9553077-CDS-H-elongata_contig53488:1005..11431691679605.9553077-CDS-H-elongata_contig53488:1005..1143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 1006..1143 -
1622930871.6747942-CDS-H-elongata_contig53488:1630..17501622930871.6747942-CDS-H-elongata_contig53488:1630..1750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 1631..1750 -
1691679605.9688797-CDS-H-elongata_contig53488:1630..17501691679605.9688797-CDS-H-elongata_contig53488:1630..1750Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 1631..1750 -
1622930871.69127-CDS-H-elongata_contig53488:1924..21201622930871.69127-CDS-H-elongata_contig53488:1924..2120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 1925..2120 -
1691679605.9855576-CDS-H-elongata_contig53488:1924..21201691679605.9855576-CDS-H-elongata_contig53488:1924..2120Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 1925..2120 -
1622930871.711992-CDS-H-elongata_contig53488:3202..32821622930871.711992-CDS-H-elongata_contig53488:3202..3282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 3203..3282 -
1691679605.9958484-CDS-H-elongata_contig53488:3202..32821691679605.9958484-CDS-H-elongata_contig53488:3202..3282Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53488 3203..3282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig53488.12693.1

>prot_H-elongata_contig53488.12693.1 ID=prot_H-elongata_contig53488.12693.1|Name=mRNA_H-elongata_contig53488.12693.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MAVSHDASIDAQAMKIIAELKAGTKTIADLLGPLTGTPDMTPSIKVRPGT
KDPVPAAPQAEFLPKDAYNTKLVANVGPTDYVNPQPLEKYDLVVIGSGAA
GLLSVIIANGLGKTCALVEQHAMGGDCLNVGCALIACATRLHDVRNSAEY
GVELSGEVKVDFSKVMQRMRRIRSDISEHDSVARYSRDFVKHIYLGRGVF
TSENTIEVAGKKLKFDKAMVATGASAAVPPVPGLKDIPHLTNSNFWNLEE
LPPRMGVIGAGPIGLELSQSMQRFGCKVTV
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mRNA from alignment at H-elongata_contig53488:224..3282-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig53488.12693.1 ID=mRNA_H-elongata_contig53488.12693.1|Name=mRNA_H-elongata_contig53488.12693.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3059bp|location=Sequence derived from alignment at H-elongata_contig53488:224..3282- (Himanthalia elongata Himel1 dioecious)
ATGGCTGTCTCTCACGACGCTAGCATTGACGCACAAGCTATGAAAATTAT TGCCGAGCTCAAGGCGGGAACCAAGACCATGTGAGACAGGAATGCGTCCC GTTTCATGCTACTATTTTATTTGCACTGTAGTGCGTGTCAGTCCTGTTCG CGTTTGGGTATCCCTTCCACCTTGTGTGTAGGATTTGCTCCTCTCAGCTG GCTTCTCCTCCCTTCTGGTTTAGCACATTTGGCACCTTGGCACGGCTTCC TCAGAAGATGATGCTCTCTTACATACATGTTGTCCCCTCCGGTTGTTCTG CTGAGGAAGCGGAGGGCATATTCACTCGAGACATCGGCAGACTGGCTCGA TGGGTATATCGCACTCGCCTCTCGACTCAGACCACAGACGCAGTTGCTAC ATCCCCGGAGTCGACAGGCCCTTCTGCTGCGTGGACATTTCGCTTCGAAC GATACCTTTTGACAGATCGTTTTATCTCCCTTTTTGCCCTGAGTTACTCC ACGCTCGAGCCGTAGATTGCCAGTACCGTGACGGCTGTTGGGCACTGTTT GATCGACGCGATGCAGACGCACGAACAAGCAGCGACAGGGTAAGGCACGA ACAAGCAGCGACAGGGTAGGGCACAAATGTGTGTGACTTCATCGAAATAA GAAGCCTGCTCTAATATCCGCTTATGGGTCACTTCTGTTGGCTCGAACGA TGTTTGATGACCTGCTCTTTGGAGCGGCACGCTTTTACTCTGGTGATATC TTGTGATGCAAAAATATCTTCAATACAAACAGAACAAATAGCTTACGTAC CTCCCTCTAATAATTTCATACCTCACGTACCAATAATTAACTTAATACGA TGTATCATGTGTGAAGATTTTGTACTCAAGGTTAGTATTGTACACATTCG AACCCGACGATAATTGGTCCCCTGCATTGCACCTCTCATGGTGCTGAGAA GGTGTGGATGTTCGGAGGGTTGGAATGAGTTCAAGGTTTTTTTAAATAAA AATGTTCTACTCCTCAATAAATAGACCACAGAAAACGCGTTTAGATCAGT TTCTCCTTCAATATCTCCTGTAAACGATGTATCACTGACACGCTCTCCCG AACGATACCCCGGCACCTCGTCGCCCTGCCCCCGTCTCTCGACCTCTGTT ATATGTAATCAGAGCGGACCTTCTTGGGCCATTGACCGGCACCCCAGACA TGACTCCATCGATCAAAGTCAGGCCGGGCACGAAAGACCCGGTACCCGCG GCGCCCCAGGCGGAATTTTTGCCTAAAGACGCCTACAACACCAAGCTGGT CGCCAACGTTGGTCCGACCGACTACGTCAACCCACAGCCGCTGGAGAAAT ACGATCTGGTGAGAGTGATGAATGTCCGCGCCGTATAAATCGATTGCCCA AGGTCTTCGACACTGCCTTCTGTTGCACACAGGGCGAAATCGAACTTCGA TCCGTGACCAATTAATCCGCGCGTCGACCAATGTGCTCCCATCTTTCTTG ACGCCAACGGGGTGACGACGCCACTTTCCCAGGTGGTAATCGGCTCCGGT GCTGCAGGACTACTAAGCGTGATCATCGCGAACGGCTTGGGCAAAACATG CGCTCTGGTGGAGCAGCACGCCATGGGCGGTGACTGCCTCAACGTTGGAT GCGTGCCTTCAAAGGCGAGCACGACGCAATTAACAATCGGCCGCCAGAAT TCGGCGAAGACGGAGTTTTTCACCTATACGCAACCCCTACACAGCTGGAT ATTTCTGTTTTGAGTGTATGTTGCGGGGACGGTGATAGTGGTCAAAACCA TCGTAGGGTGTAGGGTCAAACTACGGAAACATGGGCACATGGAAGCGATG GGATGGCCATCATCTGATCACTCCGCTGTCAATTACCCCTTCGAGAGAAG TCGCGATGAACACGAATGATCAACCAATCAGAGACTTATCTTTTTATCCA AAATTGAGTCCCAAAACCGAAGTATACAACCTTCGATCGACTTTTATATC CAAATGGTGACCTTGAACCCTCCCCTCCACAAACACACCCCACCGCGCGC AACCCAAACGCTACTAATCTCTCCGCTGCGATAATCAATCGTCCGCATTT TCATCACGACCGCCCTCTGTTCCACGTGGTTAAAAAAAGGCGCTCATCGC TTGCGCTACTCGGCTGCACGATGTCCGCAACTCGGCGGAGTATGGAGTAG AGCTCTCGGGAGAGGTTAAGGTGGACTTCAGCAAGGTCATGCAGCGGATG CGCCGGATACGTTCCGATATTTCCGAGGTAAGTTCCCTTGGTGTTTTTGT TAACACAGCGACGCCTTGGGTCAGACGCCGCGCGGAATACCCATCGCCGA CAAGAAAATAGCTCGAGTGCGAAAGAAATCCTTCAACACGCGATGAGTCG AAATTCGAATCCGAAGAAATCCGGCGCCGCAATGTTCTCGCCGGGACTGC CGCGGTCTATCCCGTGCTTGTGGTATTACCTGCAGCTGGTTCACTATCAT GGTTGTATTGCCCTCGCCAACTCCTCCTGACCGTTTCTTTTAACACCCCG CCCTCTATTCCTTCCCTTCCTCCCTGCCTACATCTCAAACGCATCATGTA GCACGACTCGGTGGCCCGTTATTCCCGAGACTTCGTGAAGCACATCTACC TCGGGCGCGGTGTGTTCACCTCGGAAAACACCATCGAGGTCGCCGGAAAG AAGCTCAAGTTCGATAAGGTACCTGCCAAGCATTTGAAAAAAAATGCCAC CCACTTGCGAATGAAATGACATTTCGAAAACCTTGGTGCTTGTACCGGAC CGGTCATTTCTCGAGCCGTGAGGCTTCAATTTTTAATCGCAACCACTGTT TTATTCCAATGACTGCGCAGGCGATGGTGGCCACGGGAGCCTCGGCAGCC GTACCCCCGGTTCCTGGGCTGAAAGACATCCCCCACCTTACCAACTCCAA CTTCTGGAACCTGGAGGAGTTGCCGCCGCGCATGGGCGTTATCGGAGCGG GTCCGATCGGCCTGGAGTTGTCTCAATCCATGCAGCGCTTCGGGTGCAAG GTGACCGTT
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Coding sequence (CDS) from alignment at H-elongata_contig53488:224..3282-

>mRNA_H-elongata_contig53488.12693.1 ID=mRNA_H-elongata_contig53488.12693.1|Name=mRNA_H-elongata_contig53488.12693.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1680bp|location=Sequence derived from alignment at H-elongata_contig53488:224..3282- (Himanthalia elongata Himel1 dioecious)
ATGGCTGTCTCTCACGACGCTAGCATTGACGCACAAGCTATGAAAATTAT
TGCCGAGCTCAAGGCGGGAACCAAGACCATATGGCTGTCTCTCACGACGC
TAGCATTGACGCACAAGCTATGAAAATTATTGCCGAGCTCAAGGCGGGAA
CCAAGACCATAGCGGACCTTCTTGGGCCATTGACCGGCACCCCAGACATG
ACTCCATCGATCAAAGTCAGGCCGGGCACGAAAGACCCGGTACCCGCGGC
GCCCCAGGCGGAATTTTTGCCTAAAGACGCCTACAACACCAAGCTGGTCG
CCAACGTTGGTCCGACCGACTACGTCAACCCACAGCCGCTGGAGAAATAC
GATCTGAGCGGACCTTCTTGGGCCATTGACCGGCACCCCAGACATGACTC
CATCGATCAAAGTCAGGCCGGGCACGAAAGACCCGGTACCCGCGGCGCCC
CAGGCGGAATTTTTGCCTAAAGACGCCTACAACACCAAGCTGGTCGCCAA
CGTTGGTCCGACCGACTACGTCAACCCACAGCCGCTGGAGAAATACGATC
TGGTGGTAATCGGCTCCGGTGCTGCAGGACTACTAAGCGTGATCATCGCG
AACGGCTTGGGCAAAACATGCGCTCTGGTGGAGCAGCACGCCATGGGCGG
TGACTGCCTCAACGTTGGATGCGTGGTAATCGGCTCCGGTGCTGCAGGAC
TACTAAGCGTGATCATCGCGAACGGCTTGGGCAAAACATGCGCTCTGGTG
GAGCAGCACGCCATGGGCGGTGACTGCCTCAACGTTGGATGCGCGCTCAT
CGCTTGCGCTACTCGGCTGCACGATGTCCGCAACTCGGCGGAGTATGGAG
TAGAGCTCTCGGGAGAGGTTAAGGTGGACTTCAGCAAGGTCATGCAGCGG
ATGCGCCGGATACGTTCCGATATTTCCGAGGCGCTCATCGCTTGCGCTAC
TCGGCTGCACGATGTCCGCAACTCGGCGGAGTATGGAGTAGAGCTCTCGG
GAGAGGTTAAGGTGGACTTCAGCAAGGTCATGCAGCGGATGCGCCGGATA
CGTTCCGATATTTCCGAGCACGACTCGGTGGCCCGTTATTCCCGAGACTT
CGTGAAGCACATCTACCTCGGGCGCGGTGTGTTCACCTCGGAAAACACCA
TCGAGGTCGCCGGAAAGAAGCTCAAGTTCGATAAGCACGACTCGGTGGCC
CGTTATTCCCGAGACTTCGTGAAGCACATCTACCTCGGGCGCGGTGTGTT
CACCTCGGAAAACACCATCGAGGTCGCCGGAAAGAAGCTCAAGTTCGATA
AGGCGATGGTGGCCACGGGAGCCTCGGCAGCCGTACCCCCGGTTCCTGGG
CTGAAAGACATCCCCCACCTTACCAACTCCAACTTCTGGAACCTGGAGGA
GTTGCCGCCGCGCATGGGCGTTATCGGAGCGGGTCCGATCGGCCTGGAGT
TGTCTCAATCCATGCAGCGCTTCGGGTGCAAGGTGACCGTTGCGATGGTG
GCCACGGGAGCCTCGGCAGCCGTACCCCCGGTTCCTGGGCTGAAAGACAT
CCCCCACCTTACCAACTCCAACTTCTGGAACCTGGAGGAGTTGCCGCCGC
GCATGGGCGTTATCGGAGCGGGTCCGATCGGCCTGGAGTTGTCTCAATCC
ATGCAGCGCTTCGGGTGCAAGGTGACCGTT
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