mRNA_H-elongata_contig53436.12685.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig53436.12685.1
Unique NamemRNA_H-elongata_contig53436.12685.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: D7FVZ4_ECTSI (Ferredoxin nitrite reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ4_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 6.350e-147
Identity = 203/278 (73.02%), Postives = 244/278 (87.77%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRLTPQEVSL 834
            ++PNGI+TT+QLRF AD   KYDPSVGVLDITTRM +Q+RGV LEDAS +I+ +YDLGLTSLM+GMDNVRNMVGSPIAG+DP+EMVDTRQLC EINDM+T  RKGNPA+T+LPRKIN A+SGGRDD+AHTMIND+GLQPH HP TGEIGFNVVVGG FS++R AESIP+DMWI+Q D V F + +LLAFR+LG RK RQ+AR+M+M+EEMGMEKFRET+VEY + +D AF+P+PAAPAP E ++RR+ +GVHPQKQEGKSWVCV TPAGRL  ++  +
Sbjct:  188 KIPNGIMTTEQLRFCADAVGKYDPSVGVLDITTRMALQLRGVTLEDASGVIDNLYDLGLTSLMTGMDNVRNMVGSPIAGLDPLEMVDTRQLCNEINDMITDNRKGNPALTNLPRKINIAISGGRDDYAHTMINDIGLQPHAHPETGEIGFNVVVGGFFSVRRAAESIPLDMWIKQNDTVAFCKGMLLAFRNLGSRKKRQEARLMFMIEEMGMEKFRETVVEYVKGVDSAFEPQPAAPAPEEAFSRRNYVGVHPQKQEGKSWVCVTTPAGRLMAEDARM 465          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A2V3J4B2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4B2_9FLOR)

HSP 1 Score: 322 bits (826), Expect = 2.920e-104
Identity = 163/278 (58.63%), Postives = 202/278 (72.66%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETL-------VEYTRKIDPAFDPKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRL 813
            +VPNGIL+++QLRF A     Y P  G  D+TTRMN+Q+RGV LE A+ I +G+Y LGLTS MSGMDNVRN+VGSP+AGIDP+EMVDTRQLC +INDM+T  RKG P +T+LPRK N A+SG RDDFAHT IND+GL P  HP T  IGFNVV+GG FSIKR AE++P+D+W+ Q DVV F E VLL FRD G RKNRQ  R+MYM++++GM+ FR+ +       ++   K  P +D         +P  RR++LGVHPQKQ G SWV    PAGRL
Sbjct:   90 KVPNGILSSQQLRFFATCLRPYGPH-GCGDVTTRMNIQLRGVLLEHAAQICDGLYQLGLTSFMSGMDNVRNLVGSPLAGIDPLEMVDTRQLCHDINDMITDSRKGRPQLTNLPRKFNIAVSGSRDDFAHTHINDIGLVPMAHPQTAHIGFNVVIGGFFSIKRDAEALPMDVWLPQSDVVRFCETVLLWFRDHGDRKNRQATRLMYMVDQLGMKTFRDQIESAMGAPLQRAVKGGPEYD---------QPAERRNVLGVHPQKQPGLSWVAACVPAGRL 357          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: R7QAL9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAL9_CHOCR)

HSP 1 Score: 323 bits (828), Expect = 5.540e-104
Identity = 165/278 (59.35%), Postives = 205/278 (73.74%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVE-YTRKIDPAFD--PKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRLTPQE 825
            +VPNG+L   Q+R+ A    KY    G  DITTRMN+Q+RG+ LEDA DI +G+Y +GLTS MSGMDNVRNMVGSPIAGIDP E+VDTR+LC+ INDM+T  R+GNPA+T+LPRK N  +SG RDDFAHT INDVGL P +HP T E+GFNVV+GG FSIKR AE+IP+D+W+   DVV F E +L+ FRD G RKNR  +R+MYM++++ M  FRE + E +  K   A D   + A PAP     RR++LGVH QKQEG SWVC   PAGRLT ++
Sbjct:  138 KVPNGLLDANQMRYFARVLEKYGDD-GCADITTRMNIQLRGIVLEDAGDICDGLYKIGLTSYMSGMDNVRNMVGSPIAGIDPEEIVDTRELCIAINDMITNNRRGNPALTNLPRKFNICVSGSRDDFAHTHINDVGLVPMVHPTTKEVGFNVVIGGFFSIKRNAEAIPMDVWLPYKDVVRFCETLLIWFRDNGDRKNRMSSRLMYMVDKLTMSGFREVIQEEFGSKFRRAVDGGEEYATPAP-----RRNVLGVHAQKQEGLSWVCGNVPAGRLTAED 409          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A6S9KFP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KFP9_HETAK)

HSP 1 Score: 321 bits (822), Expect = 3.540e-103
Identity = 162/279 (58.06%), Postives = 209/279 (74.91%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPR-KNRQQARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRLTPQEVSL 834
            +VPNGILT++QLR  AD    Y   +GV+DITTR N+Q+RG+ LEDASDIIN + ++GLTSLMSGMDNVRNMVGSPIAGIDP EM+DTRQLC+++  M+T   KG P  T+LPRK+NFA+SG RDD+AHT INDVG QP +  A G++GFNVVVGG FSIK   ESIP++MW+    VV   EA +  FRD G R K+RQ+ R+M ++E+MG+E FR  +V    K+DPA +   A P P + + +RD++G+H QKQEG SWV V+ PAGRL P++V +
Sbjct:  131 KVPNGILTSEQLRLFADTVEPYG-EIGVIDITTRQNIQMRGIVLEDASDIINNLNNIGLTSLMSGMDNVRNMVGSPIAGIDPHEMIDTRQLCIDMQKMITNDNKGRPEYTNLPRKMNFAISGSRDDYAHTSINDVGFQP-IANAEGKMGFNVVVGGYFSIKAAVESIPLNMWVPPEAVVPLSEAFIRYFRDNGQRVKDRQKTRMMILIEQMGVEAFRAGVVAELAKLDPAVETFEAVPEPEDVWEKRDLMGIHAQKQEGLSWVGVVVPAGRLFPEDVRM 407          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A7S0D8G4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D8G4_9EUKA)

HSP 1 Score: 314 bits (804), Expect = 2.140e-100
Identity = 155/284 (54.58%), Postives = 211/284 (74.30%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAA--PAPPEPY-----ARRDILGVHPQKQEGKSWVCVMTPAGRLTPQEVS 831
            +VPNG++T++Q+RF A    KY   VGV+DITTR N+Q+RG+ L+DA+DII+G+Y+  L+++ SGMDNVRN+VG+PIAG+DP EM+DTR LC  INDM+T   KGNPA+T+LPRK N A+SG RDDFAHT IND+GL P  +  TGE+GFNV+VGG FSIKRV ESIP+D+W++  D  +F E +L  FRD G R +RQ+AR+++++E+ G++KFR+T+ E     D  F  K  A   + PEP+     A+RD+LGVH QKQ+G S+V V  P GR+ P E +
Sbjct:  118 KVPNGVVTSEQMRFFAKSVGKYPVEVGVIDITTRQNIQLRGLELQDATDIIDGLYERDLSNVQSGMDNVRNLVGNPIAGLDPHEMIDTRPLCKSINDMITNSGKGNPAMTNLPRKFNIAVSGSRDDFAHTTINDIGLCPCPNKETGEMGFNVIVGGYFSIKRVMESIPMDLWVKPEDATDFCEVMLEVFRDNGDRGDRQKARLIWLIEKWGLDKFRDTVKE---AFDAKFPSKAGALISSQPEPWKGTTWAKRDLLGVHEQKQDGLSFVGVNVPVGRILPDEAN 398          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: Q7XYQ0_BIGNA (Ferredoxin nitrite reductase n=1 Tax=Bigelowiella natans TaxID=227086 RepID=Q7XYQ0_BIGNA)

HSP 1 Score: 305 bits (781), Expect = 2.830e-96
Identity = 153/288 (53.12%), Postives = 205/288 (71.18%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAAPAPPEPYA-------------RRDILGVHPQKQEGKSWVCVMTPAGRLTPQE 825
            +VPNG+LT+  +RF AD    Y   VGV+DITTR N+Q+RG+ L+D +++I+G+   GL+++ SGMDNVRN+VGSPIAGIDP E+VDTR +  +I+ M+T   KGNP + +LPRK N A+SG RDDFAHT IND+GL+P  +  +GE+GFNV+VGG FSIKRV ESIP+D+WI+  D   F EAVLL FRD G R +RQ+AR+++++E+MGME FR+ + +   ++ P      A PA PEP+A             +RDIL VH QKQEG SWV +  PAGR+ P E
Sbjct:  170 KVPNGLLTSDHMRFFADTVGIYPADVGVIDITTRQNIQLRGIELQDMTELIDGLQMRGLSNVQSGMDNVRNLVGSPIAGIDPEELVDTRDIAKDIDAMITNDGKGNPKLANLPRKFNIAVSGSRDDFAHTSINDIGLRPCPNKESGEMGFNVIVGGYFSIKRVMESIPMDIWIKAEDAARFCEAVLLYFRDNGSRGDRQKARLIWLIEDMGMEGFRQAISDKYDEMFPKKKGGAAIPAQPEPWAVAAGTNTPTQPHKKRDILRVHSQKQEGLSWVGINVPAGRILPDE 457          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A1X6P1I5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1I5_PORUM)

HSP 1 Score: 296 bits (759), Expect = 1.630e-93
Identity = 155/274 (56.57%), Postives = 195/274 (71.17%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYT--RKIDPAFDPKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRLT 816
            +VPNGILT+ QLRF+A   + Y    G  DITTRMN+Q+RG+  EDA+ I +G+Y+ GLTS  +GMD+VRNMVGSPIAGIDP EM+DTR+LC E+NDM+T  RKGNP  T+LPRK N  +SG RDDFAHT IND+GL P ++ A G +GFNVVVGG+FSIKR AE++P+D W+    V  F +A+L  FRD G RK RQ+ R+MYM+++ G +  R+ +VE+       PA  P P    P   + RRDI GVH QKQEG SWV    PAGRLT
Sbjct:  151 KVPNGILTSTQLRFLASCIAPYGED-GCADITTRMNIQLRGIVTEDAAAICDGLYENGLTSFQAGMDSVRNMVGSPIAGIDPHEMIDTRELCTELNDMITNFRKGNPEFTNLPRKFNICVSGSRDDFAHTHINDIGLVPMVN-ADGVVGFNVVVGGMFSIKRDAEAVPMDAWLTPAQVTPFCKALLEVFRDQGDRKIRQKTRLMYMIDQWGADGLRDRVVEHMGGTPFAPAVIPGPEYDTP---WPRRDIQGVHAQKQEGLSWVGCNVPAGRLT 419          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A8J5XYI8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XYI8_DIALT)

HSP 1 Score: 293 bits (749), Expect = 6.220e-92
Identity = 148/279 (53.05%), Postives = 195/279 (69.89%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHP-ATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYT--RKIDPAFDPKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRLTPQEV 828
            +VPNG++T  Q R  AD    Y P +GV+DITTR N+Q+RG+ LEDAS + + + + GL S MSG+DNVRN+VGSPIAG+DP E+VDTR +C +IN  +T   +GNP   +LPRK N A+SG RDDF+HT IND+GLQ  +HP    E GFN+V+GG FSIKRVAESIP+  W+   D   F  AVL  FRD G R++RQ+ R+M+++EE G++ FR  + E    R +D     + AAP P + ++RRD+LGVH Q+QEGKSWV V  P GRL+  EV
Sbjct:  147 KVPNGVITAAQARVFADLVEPYGPKLGVVDITTRQNIQLRGITLEDASHVADALLECGLGSFMSGLDNVRNLVGSPIAGLDPHELVDTRPVCAQINSDITGAFRGNPEWANLPRKFNIAVSGSRDDFSHTTINDIGLQAAVHPDCPSEPGFNIVLGGYFSIKRVAESIPMGAWVSARDAPAFSLAVLEVFRDYGRREDRQKTRLMWLLEERGLDWFRAMVNEILARRGVDAL---RAAAPPPADAFSRRDLLGVHTQRQEGKSWVGVTVPVGRLSVGEV 422          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A7S2QSF0_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2QSF0_9EUKA)

HSP 1 Score: 295 bits (755), Expect = 6.790e-92
Identity = 148/282 (52.48%), Postives = 204/282 (72.34%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAA--PAPPEPYA-----RRDILGVHPQKQEGKSWVCVMTPAGRLTPQE 825
            +VPNG + +  +RF AD    Y   VGV+DITTR N+Q+RG+ L+D +D+I+G+ + GL+++ SGMDNVRN+VGSPIAGIDP E++DT  +  EI++MVT   KGNP +  LPRK N A+SG RDDFAHT IND+GL+P  +  TGE+GFNV+VGG FSIKRV ESIP++MW++  D  +F E +L+ FRD G R +RQ+AR+++++E+ GMEKFRE ++E   + D  F  K  A   A PEP+A     +RD++GV  QKQ+G S++ V  PAGR+ P E
Sbjct:  228 KVPNGYVNSDHMRFFADSVGIYPVEVGVIDITTRQNIQLRGLELQDMTDLIDGLAERGLSNVQSGMDNVRNLVGSPIAGIDPEELIDTWPIAKEIDNMVTNHGKGNPKLASLPRKFNIAVSGSRDDFAHTSINDIGLRPCPNKETGEMGFNVIVGGYFSIKRVMESIPMNMWVKPEDAADFCETMLMVFRDHGSRGDRQKARLIWLIEDWGMEKFREKIIE---EFDSMFPNKAGALLEAQPEPWAGTKHEKRDLMGVFAQKQDGLSFIGVNVPAGRILPDE 506          
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Match: A0A7S1TF51_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF51_9RHOD)

HSP 1 Score: 290 bits (743), Expect = 2.010e-91
Identity = 143/272 (52.57%), Postives = 192/272 (70.59%), Query Frame = 1
Query:    1 QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDIINGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVTAGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGFNVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAAPAPPEPYARRDILGVHPQKQEGKSWVCVMTPAGRLT 816
            ++PNGI+T++ +RF +    KY  + G +DITTR ++Q+RGV +ED  DI + +++LG+TS M+GMDNVRN+VGSPIAGIDP E+ DTR+LC  I+DM+T  R GNP  ++LPRK N  +SG RDDFAHT IND+G  P  H  TGEIGFNVVVGGLFSIKR   S+P+++WI   +VV F  AVL  FRD G R +RQ AR MY++++ G++  RE +++    +    D   A P   E + RRD+LGVHPQKQEG  W+ V  P GR++
Sbjct:  123 KIPNGIVTSEMMRFFSQAVEKYGEA-GCIDITTRQSIQLRGVVIEDCPDIFDNLHELGITSFMTGMDNVRNLVGSPIAGIDPEELFDTRELCANISDMITNNRAGNPQFSNLPRKFNICVSGSRDDFAHTHINDLGFIPVPHRETGEIGFNVVVGGLFSIKRNEMSVPLNLWIHPSNVVEFCRAVLTVFRDHGARVSRQSARFMYLVDQWGVDTLRERVLQ---AMAVPVDSIEAQPESEEVFHRRDVLGVHPQKQEGLFWLGVNVPVGRMS 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53436.12685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ4_ECTSI6.350e-14773.02Ferredoxin nitrite reductase n=2 Tax=Ectocarpus Ta... [more]
A0A2V3J4B2_9FLOR2.920e-10458.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QAL9_CHOCR5.540e-10459.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6S9KFP9_HETAK3.540e-10358.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0D8G4_9EUKA2.140e-10054.58Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
Q7XYQ0_BIGNA2.830e-9653.13Ferredoxin nitrite reductase n=1 Tax=Bigelowiella ... [more]
A0A1X6P1I5_PORUM1.630e-9356.57Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A8J5XYI8_DIALT6.220e-9253.05Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2QSF0_9EUKA6.790e-9252.48Hypothetical protein n=1 Tax=Norrisiella sphaerica... [more]
A0A7S1TF51_9RHOD2.010e-9152.57Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53436contigH-elongata_contig53436:809..3553 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score439.5
Seed ortholog evalue1.2e-120
Seed eggNOG ortholog2880.D7FVZ4
Preferred nameNIR
KEGG rclassRC00176
KEGG koko:K00366
KEGG ReactionR00790
KEGG Pathwayko00910,ko01120,map00910,map01120
KEGG ModuleM00531
GOsGO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0010035,GO:0010167,GO:0016020,GO:0016491,GO:0016661,GO:0016662,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048046,GO:0050421,GO:0050896,GO:0055114,GO:0098809,GO:1901698,GO:1901700
EggNOG free text desc.sulfite reductase (ferredoxin) activity
EggNOG OGsCOG0155@1,KOG0560@2759
EC1.7.7.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionferredoxin nitrite reductase
Ec32 orthologEc-01_002720.1
Exons4
Model size834
Cds size834
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53436.12685.1prot_H-elongata_contig53436.12685.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig53436 809..3553 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930871.0242739-CDS-H-elongata_contig53436:808..9991622930871.0242739-CDS-H-elongata_contig53436:808..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 809..999 +
1691679605.634432-CDS-H-elongata_contig53436:808..9991691679605.634432-CDS-H-elongata_contig53436:808..999Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 809..999 +
1622930871.0396671-CDS-H-elongata_contig53436:1972..22221622930871.0396671-CDS-H-elongata_contig53436:1972..2222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 1973..2222 +
1691679605.649464-CDS-H-elongata_contig53436:1972..22221691679605.649464-CDS-H-elongata_contig53436:1972..2222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 1973..2222 +
1622930871.0513592-CDS-H-elongata_contig53436:2618..27311622930871.0513592-CDS-H-elongata_contig53436:2618..2731Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 2619..2731 +
1691679605.6608255-CDS-H-elongata_contig53436:2618..27311691679605.6608255-CDS-H-elongata_contig53436:2618..2731Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 2619..2731 +
1622930871.063754-CDS-H-elongata_contig53436:3273..35531622930871.063754-CDS-H-elongata_contig53436:3273..3553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 3274..3553 +
1691679605.6724854-CDS-H-elongata_contig53436:3273..35531691679605.6724854-CDS-H-elongata_contig53436:3273..3553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53436 3274..3553 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig53436.12685.1

>prot_H-elongata_contig53436.12685.1 ID=prot_H-elongata_contig53436.12685.1|Name=mRNA_H-elongata_contig53436.12685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
QVPNGILTTKQLRFMADKASKYDPSVGVLDITTRMNMQIRGVPLEDASDI
INGIYDLGLTSLMSGMDNVRNMVGSPIAGIDPIEMVDTRQLCVEINDMVT
AGRKGNPAVTHLPRKINFALSGGRDDFAHTMINDVGLQPHLHPATGEIGF
NVVVGGLFSIKRVAESIPIDMWIRQGDVVNFLEAVLLAFRDLGPRKNRQQ
ARIMYMMEEMGMEKFRETLVEYTRKIDPAFDPKPAAPAPPEPYARRDILG
VHPQKQEGKSWVCVMTPAGRLTPQEVSL
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mRNA from alignment at H-elongata_contig53436:809..3553+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig53436.12685.1 ID=mRNA_H-elongata_contig53436.12685.1|Name=mRNA_H-elongata_contig53436.12685.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2745bp|location=Sequence derived from alignment at H-elongata_contig53436:809..3553+ (Himanthalia elongata Himel1 dioecious)
CAGGTACCCAATGGGATATTGACCACGAAGCAGCTGAGGTTCATGGCGGA CAAGGCGTCCAAATACGACCCTTCGGTGGGAGTGCTGGACATCACGACTC GCATGAACATGCAGATCAGAGGGGTTCCGCTCGAAGACGCGTCGGACATC ATTAACGGAATTTACGACCTGGGGCTGACGTCACTGATGAGGTTTCCCGT TGCGTTTGCACGATACCACACATATGTGACCGCATATGGTACTGTCTGTG ACTATATCAATAATGAATCAATAATGTATCAATAATAGTACATGTCCACT CTATGCAGTACCAATAGTATATATGAGAAAAGAGAGGCGCACAATAATTG GTTCATGAGGTTACCTGGACAGGCTGCACCCAATCTACCTTGAGGACTAT TGGCTCAGTGCCGGCGGACTCTCGGTCGTAAACGCCATCGGTACGCAATT GCATTAATTTATGAATTCGGGAATTACGCACTAGATTCAGTCTGGGTTAG GAAAATGAGTGGGCTGACGAGGGACAGGACGGCCGAACGGTGACAGGGAA AAATCATTTTTCCTGTTTAGCTGACCACAAGAAGGAGGCAACCATATCCG GTTGATTCATACTATAGTCTACTATACTATACTGCTATATACTATACTAT ACTGCTATATACTATACTATACTAAACTGCTATATAATATACTAAACTGC TATATGTGATGACCACCCACCCACATATATATATATATTGCTATGACTTT AAGCATAGCGCCCATTATCGTTTCCCTTTTGACGATCCTGGCGTGGGACC TCTTTAGGCACTTTAAGCTTGCGAGTCGGTTCTGGTGTATATAGCTACAT TGGATGTAGCGATGTAAATGAACAAGCCCGTTAAAGAGCACGCCCTTTCC TAGCATATCAACCAAAATGCCTCGATGTTTGAACTATTCCCGAACTTCTG TCGAATTGGCTAGAGGGCAACACCCAACCACCCCGAATTTGATTTGTCCT TGCACTCCGTCGCTGAGAGTCGCGGATGCCGTGCCAACTGAATAAGCCTG CTTTTTTATTAGTACATCCTTCAAAAGATAAAATGCCTCATTCTCGAATC GCGGTATCCCTTCGTGACCCCCTCCCCTCCCCTTCAACCACCTCACGAAC GAAACCTTGGTTAGTGGCATGGACAACGTGCGCAACATGGTCGGCAGCCC CATCGCGGGCATCGACCCGATCGAGATGGTGGACACACGCCAGCTGTGCG TGGAAATCAACGACATGGTCACCGCCGGCCGCAAGGGCAACCCGGCAGTG ACCCACCTCCCGCGCAAGATCAACTTCGCCCTGTCTGGAGGACGAGATGA CTTCGCGCACACAATGATCAACGACGTCGGTCTGCAGCCGCATTTGCACC CCGCAACGGGAGAGGTGAGAAGTGCGGTAGCGGAAGCTAGTACGCATTAC CGACAGGACGAAGCGGGGTGGACATGGCGGATATATGGAATGGGAGTGGA TGCCGTTTTTCACGATGTTGCTCCTGGGGGGGGCTTAGTTGCGTCGGTGG TCTCGTTCGGGGCGGGGTGAACTCGTAACGACGCGAGTGGGCAGCGCGAG ATGCGGTTTGCGCGAAGGTGTTTCTAGGGAGCTGGGATGATGCCGTCGCC AGGGTCTGGTGCGTAGTTTTGCTGGCCAAGTGACGAGACACTCACCGTAG ACCCTCACACGTGGTGATCGCATACGGTATGCTCTTTACCAAGATATCAA CCGGGACCCATTCCTGACGAAATGTAATGCTGATATCCGTGTGATGTTTG CGCCTTACAGATAGGTTTCAACGTCGTCGTGGGGGGACTTTTTTCCATAA AGAGGGTAGCCGAGAGCATCCCGATCGACATGTGGATTAGGCAGGGCGAC GTGGTCAACTTCCTCGAGGCTGTGTGAGTCCCTCCGCACATTGGCATCCT CCTGTTCGGGTCCATTTTTGTGTTTGGACGTATTGTGTGTAAACGTTTCG TCGATTTACCATCCGCTTCGCCTTCTCCTGATGGTGTTTATCCCGCCCTG TCGAACCGAGGCGTGACGCCTACCACAGCCACGTAGTGTGTCTATCGCAT CATCCCCCTCCTCCAACCATTTACACTTCAAGCTGTAACGAGGCCCCTTA GGGAAAGTCTTTCTCCGCCGTGCCAAAAATACAAAAGAAGGATCAGTATC GATGTCGACGCGTCGTACTCAACTGGCGTGCGTTATCGTCAGAGCCTTAT TTAGCTTTTGGCGAGGATGACATGGCTCGGTCGAAAAAATACCAGCCACA GTGACAGCGAGGGTATATATCCCGGGAGGCATGTGGATACGTACTTAGCG TGGAACATCAGGTTGTAATCTATGCTATTGGAACTATGAAGGTACACCGG AGATTCACGTCGCTCGCGAACAAAGAAAATAATAGACTAATACATACCGC GTCCGCGAACCCCAGGCTCTTGGCCTTCAGGGACCTCGGACCGCGCAAGA ATAGGCAGCAGGCGCGCATCATGTACATGATGGAGGAAATGGGGATGGAG AAGTTTCGCGAGACCCTGGTGGAGTACACAAGAAAGATCGACCCGGCGTT CGATCCTAAGCCCGCGGCACCTGCGCCGCCAGAGCCGTACGCGAGACGGG ATATCCTAGGGGTACACCCGCAGAAGCAGGAAGGGAAGTCGTGGGTTTGC GTGATGACGCCTGCCGGCCGTCTCACGCCGCAAGAGGTCAGTCTC
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Coding sequence (CDS) from alignment at H-elongata_contig53436:809..3553+

>mRNA_H-elongata_contig53436.12685.1 ID=mRNA_H-elongata_contig53436.12685.1|Name=mRNA_H-elongata_contig53436.12685.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig53436:809..3553+ (Himanthalia elongata Himel1 dioecious)
CAGGTACCCAATGGGATATTGACCACGAAGCAGCTGAGGTTCATGGCGGA
CAAGGCGTCCAAATACGACCCTTCGGTGGGAGTGCTGGACATCACGACTC
GCATGAACATGCAGATCAGAGGGGTTCCGCTCGAAGACGCGTCGGACATC
ATTAACGGAATTTACGACCTGGGGCTGACGTCACTGATGAGCAGGTACCC
AATGGGATATTGACCACGAAGCAGCTGAGGTTCATGGCGGACAAGGCGTC
CAAATACGACCCTTCGGTGGGAGTGCTGGACATCACGACTCGCATGAACA
TGCAGATCAGAGGGGTTCCGCTCGAAGACGCGTCGGACATCATTAACGGA
ATTTACGACCTGGGGCTGACGTCACTGATGAGTGGCATGGACAACGTGCG
CAACATGGTCGGCAGCCCCATCGCGGGCATCGACCCGATCGAGATGGTGG
ACACACGCCAGCTGTGCGTGGAAATCAACGACATGGTCACCGCCGGCCGC
AAGGGCAACCCGGCAGTGACCCACCTCCCGCGCAAGATCAACTTCGCCCT
GTCTGGAGGACGAGATGACTTCGCGCACACAATGATCAACGACGTCGGTC
TGCAGCCGCATTTGCACCCCGCAACGGGAGAGTGGCATGGACAACGTGCG
CAACATGGTCGGCAGCCCCATCGCGGGCATCGACCCGATCGAGATGGTGG
ACACACGCCAGCTGTGCGTGGAAATCAACGACATGGTCACCGCCGGCCGC
AAGGGCAACCCGGCAGTGACCCACCTCCCGCGCAAGATCAACTTCGCCCT
GTCTGGAGGACGAGATGACTTCGCGCACACAATGATCAACGACGTCGGTC
TGCAGCCGCATTTGCACCCCGCAACGGGAGAGATAGGTTTCAACGTCGTC
GTGGGGGGACTTTTTTCCATAAAGAGGGTAGCCGAGAGCATCCCGATCGA
CATGTGGATTAGGCAGGGCGACGTGGTCAACTTCCTCGAGGCTGTATAGG
TTTCAACGTCGTCGTGGGGGGACTTTTTTCCATAAAGAGGGTAGCCGAGA
GCATCCCGATCGACATGTGGATTAGGCAGGGCGACGTGGTCAACTTCCTC
GAGGCTGTGCTCTTGGCCTTCAGGGACCTCGGACCGCGCAAGAATAGGCA
GCAGGCGCGCATCATGTACATGATGGAGGAAATGGGGATGGAGAAGTTTC
GCGAGACCCTGGTGGAGTACACAAGAAAGATCGACCCGGCGTTCGATCCT
AAGCCCGCGGCACCTGCGCCGCCAGAGCCGTACGCGAGACGGGATATCCT
AGGGGTACACCCGCAGAAGCAGGAAGGGAAGTCGTGGGTTTGCGTGATGA
CGCCTGCCGGCCGTCTCACGCCGCAAGAGGTCAGTCTCGCTCTTGGCCTT
CAGGGACCTCGGACCGCGCAAGAATAGGCAGCAGGCGCGCATCATGTACA
TGATGGAGGAAATGGGGATGGAGAAGTTTCGCGAGACCCTGGTGGAGTAC
ACAAGAAAGATCGACCCGGCGTTCGATCCTAAGCCCGCGGCACCTGCGCC
GCCAGAGCCGTACGCGAGACGGGATATCCTAGGGGTACACCCGCAGAAGC
AGGAAGGGAAGTCGTGGGTTTGCGTGATGACGCCTGCCGGCCGTCTCACG
CCGCAAGAGGTCAGTCTC
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