mRNA_H-elongata_contig53331.12674.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: UPI000B9380F6 (uncharacterized protein LOC111028171 n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B9380F6) HSP 1 Score: 73.2 bits (178), Expect = 6.320e-14 Identity = 40/105 (38.10%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 1 PPRKKPKAAMTSS--QIITEWGLHKDDIVSESDLNYPGNPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESMK 309
PP KK ++ M +S + E LHK ++ + +++ +PL WW R+YP V+ +A KYL+ A+ ER+FS G ++TK+RNRLS DR+ + FL+ +K
Sbjct: 48 PPTKKIRSLMANSDEENEDEDELHKYKSMT-AKISHNQDPLLWWKYNERIYPAVSQMANKYLSEVATSVPCERLFSEAGQIITKRRNRLSPDRVNQLLFLNSYLK 151
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: UPI000C760D92 (zinc finger BED domain-containing protein 4-like n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI000C760D92) HSP 1 Score: 70.9 bits (172), Expect = 2.200e-12 Identity = 33/95 (34.74%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 13 KPKAAMTSSQIITEWGLHKDDIVSESDLNYPGNPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLH 297
KPK TS ++ ++D++ +D NPL WW YP+++ +AQ+ L+ A+ ER+FS G+V++ +RNRLSG++++ I FL+
Sbjct: 188 KPKGTATSRALMEVQRYMEEDLLPRND-----NPLDWWREHKYSYPYLSIVAQEKLSIVATSVPCERIFSKAGLVISDRRNRLSGNKVDKILFLN 277
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: A0A672JL57_SALFA (BED-type domain-containing protein n=5 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672JL57_SALFA) HSP 1 Score: 70.5 bits (171), Expect = 6.330e-12 Identity = 35/122 (28.69%), Postives = 65/122 (53.28%), Query Frame = 1
Query: 1 PPRKKPKAAMTSSQII-TEWGLHKDDIVSESD----------------LNYPGNPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESMKHD 315
PP K+P+A+ + ++ + + K+D ++SD L G+PL WW YPH++T+A+++L + +ERVFS G +VT KR+ L + ++ + FL +++K +
Sbjct: 467 PPVKRPRASCALADLLGSTFPTQKNDTETKSDQEAAEDEVKMFRMESPLPLNGDPLNWWMEHEGAYPHISTVARRFLCVPGTSVSAERVFSTAGDIVTAKRSVLKAEHVDQLVFLQKNLKRN 588
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: UPI00077D09EE (zinc finger BED domain-containing protein 1-like n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=UPI00077D09EE) HSP 1 Score: 68.9 bits (167), Expect = 6.340e-12 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 37 SQIITEWGLHKDDIVSESDLNYPG--------NPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLH 297
++ I + G +++ V + L Y G +PL WW +P +ATLA+ YL A++A SER+FSV G +VTKKR L+ + +E + FLH
Sbjct: 131 NENIDQGGDGENETVRKEVLLYFGEAPIPRDNDPLTWWKNNATRFPTLATLAKSYLAVPATWAPSERLFSVAGNIVTKKRASLTAEHVETLTFLH 225
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: A0A8H5CSX0_9AGAR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5CSX0_9AGAR) HSP 1 Score: 68.9 bits (167), Expect = 2.200e-11 Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 121 WWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESMKHDL 318
WW T +YP ++LA+ YL S SER FS GG+V+TK+RNRL D +E + FL +KHDL
Sbjct: 532 WWGMRTAMYPTWSSLARDYLAIMGSSVSSERAFSGGGLVITKRRNRLKSDIVEALQFLKCLIKHDL 597
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: E2BLX1_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BLX1_HARSA) HSP 1 Score: 63.2 bits (152), Expect = 4.370e-11 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 109 NPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESM 306
+PL WW +P +A LA+ YL A+ SERVFSVGG +VT KR L D + I F H+++
Sbjct: 1 DPLMWWKANASQFPTLAPLARHYLNIAATETSSERVFSVGGNIVTNKRTNLLADNVRQIIFCHDNL 66
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: R7UJ35_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJ35_CAPTE) HSP 1 Score: 62.4 bits (150), Expect = 8.340e-11 Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 109 NPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESM 306
+PL WWA YP VA +A+ L AS +ER+FS+GG +VT KR +L+ ++ + FL ++M
Sbjct: 3 DPLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLGGNIVTNKRTKLTSSNVDSLIFLAKNM 68
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: UPI001E1DA5D0 (E3 SUMO-protein ligase ZBED1-like isoform X1 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA5D0) HSP 1 Score: 66.6 bits (161), Expect = 1.350e-10 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 10 KKPKAAMTSSQIITEWGLHKDDIVSESDLNYPGNPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESM 306
K P +A+ +I ++D S+ L L WW + VYP +A LA+KYL AS SERVFS+ G +V KKR+RL+ D I + FL +M
Sbjct: 343 KTPVSAVIEQEIERYLASNRDADDSKLSL------LQWWEKNQYVYPRLAVLAKKYLAIPASSVPSERVFSLAGSLVNKKRSRLNPDLINKLIFLKMNM 435
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: X1XCT7_ACYPI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XCT7_ACYPI) HSP 1 Score: 65.9 bits (159), Expect = 1.370e-10 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 1
Query: 1 PPRKKPKAAMTSSQIITE--WGLHKDDIVSESD--------LNYPGNPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESMK 309
PPRKK ++ M S E + + + + + + + Y +PL WW Y V+ LA+KYL+ A+ ER+FS G +++KKRNRLS +R+ + FL+ K
Sbjct: 136 PPRKKLRSLMIDSDDDDEDDYSITQSPTMKQLEEYKNLKIKVPYDQDPLNWWKENESKYSAVSLLAKKYLSIVATSVPCERLFSEAGTIISKKRNRLSPERLNQLLFLNSYFK 248
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Match: UPI001E1DEB19 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEB19) HSP 1 Score: 66.6 bits (161), Expect = 1.430e-10 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 10 KKPKAAMTSSQIITEWGLHKDDIVSESDLNYPGNPLGWWARATRVYPHVATLAQKYLTFQASYAVSERVFSVGGIVVTKKRNRLSGDRIEDIAFLHESM 306
K P +A+ +I ++D S+ L L WW + VYP +A LA+KYL AS SERVFS+ G +V KKR+RL+ D I + FL +M
Sbjct: 582 KTPVSAVIEQEIERYLASNRDADDSKLSL------LQWWEKNQYVYPRLAVLAKKYLAIPASSVPSERVFSLAGSLVNKKRSRLNPDLINKLIFLKMNM 674 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53331.12674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53331.12674.1 >prot_H-elongata_contig53331.12674.1 ID=prot_H-elongata_contig53331.12674.1|Name=mRNA_H-elongata_contig53331.12674.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp MTSSQIITEWGLHKDDIVSESDLNYPGNPLGWWARATRVYPHVATLAQKYback to top mRNA from alignment at H-elongata_contig53331:2784..3104+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53331.12674.1 ID=mRNA_H-elongata_contig53331.12674.1|Name=mRNA_H-elongata_contig53331.12674.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=321bp|location=Sequence derived from alignment at H-elongata_contig53331:2784..3104+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53331:2784..3104+ >mRNA_H-elongata_contig53331.12674.1 ID=mRNA_H-elongata_contig53331.12674.1|Name=mRNA_H-elongata_contig53331.12674.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=588bp|location=Sequence derived from alignment at H-elongata_contig53331:2784..3104+ (Himanthalia elongata Himel1 dioecious)back to top |