mRNA_H-elongata_contig53077.12635.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: D7FVV1_ECTSI (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV1_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 1.040e-152 Identity = 217/246 (88.21%), Postives = 234/246 (95.12%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLDDLLEGFEDVQRVVGFVDYDNTAAEYKLD 738
MTGFGVSGAHGLPDTQLLSYAEMLASATNIC+TLR IPCIGDGDTGYGN+VNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHT+GK+VVGREEAYSRVRAACDARDEG DI++MARTDAR LG+EEALERC+EFR+IGADITFLEAPQSEEEMRRYC+EVDGPKLANMLEFGKTPILPP +L+ MGY IAAYPLSLLSASIKAMN+ L RLKA EPLDDLLEGFE+VQRVVGF DYD+TA +YK+D
Sbjct: 106 MTGFGVSGAHGLPDTQLLSYAEMLASATNICATLRDIPCIGDGDTGYGNSVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARDEGADILIMARTDARAGLGLEEALERCKEFRKIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPVELEKMGYAIAAYPLSLLSASIKAMNSTLERLKAGEPLDDLLEGFEEVQRVVGFRDYDSTAEKYKID 351
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: A0A835ZB25_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB25_9STRA) HSP 1 Score: 337 bits (863), Expect = 4.470e-113 Identity = 169/236 (71.61%), Postives = 196/236 (83.05%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLDDLLEGFEDVQRVVGFVDY 708
MTGFGVS +HG PDTQL+SYAEM A I + L IPCIGDGDTGYGNAVNVKRTV+GYAQ G+A IMIEDQV+PK+CGHTRGK VVGR EA +RV+AACDARDEG DI+++ARTDARG LG+ EALERC+EF+RIGADI FLEAP+S +EM+++C EV GPKLANMLE GKTPIL P +L AMG+ IAAYPL+LLSAS++AM L RLKA E DDLL F++VQ VGF DY
Sbjct: 94 MTGFGVSASHGFPDTQLISYAEMQQRALEIIAALDSIPCIGDGDTGYGNAVNVKRTVRGYAQAGLAAIMIEDQVSPKKCGHTRGKDVVGRAEALARVQAACDARDEGADILILARTDARGPLGMREALERCQEFKRIGADIIFLEAPESVQEMQQFCDEVPGPKLANMLEHGKTPILSPKELGAMGFAIAAYPLTLLSASMRAMRFALQRLKAGESCDDLLLPFQEVQAGVGFPDY 329
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: W7TTL0_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTL0_9STRA) HSP 1 Score: 332 bits (851), Expect = 4.870e-111 Identity = 171/244 (70.08%), Postives = 199/244 (81.56%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLDDLLEGFEDVQRVVGFVDYDNTAAEYK 732
MTGFGVS A G PDTQLLSYAEM+ +A I L IPCIGDGDTGYGNAVNVKRTV GYAQ G+AGIMIEDQVAPK+CGHT+GKS V REEA++RV+AA DAR+EG DI++MARTDAR LG++EA+ RC++FR IGADITFLEAP SEEEMRRYC+EV+GPKLANML+ G+TP+LPPA+LQ MGY I AYPL+LLSA IKAM TVL+ K + + LL FE+ + VVGF Y AAE K
Sbjct: 93 MTGFGVSAARGHPDTQLLSYAEMVDNARQISEALHTIPCIGDGDTGYGNAVNVKRTVGGYAQAGLAGIMIEDQVAPKKCGHTKGKSCVSREEAFARVQAAVDARNEGADILIMARTDARAGLGMDEAIYRCQKFREIGADITFLEAPHSEEEMRRYCQEVEGPKLANMLQNGRTPVLPPAKLQEMGYTIVAYPLALLSAGIKAMRTVLTLAKDGKEFEHLLADFEETKAVVGFPAY--YAAEEK 334
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: A0A0G4G948_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G948_VITBC) HSP 1 Score: 318 bits (816), Expect = 1.450e-106 Identity = 154/236 (65.25%), Postives = 190/236 (80.51%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLDDLLEGFEDVQRVVGFVDY 708
M+GF VS A G PDTQL+SY EM+ + +IC+TL+ P IGDGD GYGN VNVKRTVKGYAQ G A +MIEDQVAPKRCGHT+GK V+ E+A +++AA DAR+EG DI+++ARTDAR G++EA+ RC+ FRR+GADITFLEAPQ+EEEMRRYC EVDGPKLANMLE GK+PI+PP +LQA+G+KI AYPL+LLS+ IKAM L LKA +P D + FED++ +VGF DY
Sbjct: 43 MSGFSVSAARGFPDTQLISYQEMVDTCASICATLKTTPLIGDGDNGYGNPVNVKRTVKGYAQAGAACVMIEDQVAPKRCGHTKGKDVISYEDACMKIQAAVDARNEGRDILILARTDARATHGLDEAIRRCQAFRRLGADITFLEAPQTEEEMRRYCTEVDGPKLANMLEGGKSPIIPPKELQAIGFKIVAYPLTLLSSGIKAMKNALDALKAGKPTDSYILPFEDLRAIVGFEDY 278
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: A0A0G4I971_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I971_9ALVE) HSP 1 Score: 319 bits (817), Expect = 1.750e-106 Identity = 172/258 (66.67%), Postives = 197/258 (76.36%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRR-IPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDE--------GTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLD---DLLEGFEDVQRVVGFVDYDNTAAEYKLD 738
MTGFGVS + G PD QL+S+ EML+SAT I + LR+ PCI DGDTGYGNAVNVKRTV+GYAQVGMAG+MIEDQVAPKRCGHTR K+VVG +EA +RVRAACDARDE G DI VMARTDA L EEAL RCR FR GADITFLEAP+S EEM+RYC+EV+GPKLANM+E GKTP+LPP++LQ MGY IAAYP+SLLSASI AM L ++ E L+ D+L F DV R VGF DY A YK +
Sbjct: 54 MTGFGVSASRGFPDAQLVSFGEMLSSATTIVAALRKGTPCIADGDTGYGNAVNVKRTVRGYAQVGMAGVMIEDQVAPKRCGHTRVKAVVGFDEALARVRAACDARDEIRSAGLYGGNDICVMARTDANNALDFEEALRRCRAFREAGADITFLEAPKSIEEMKRYCEEVEGPKLANMVEGGKTPVLPPSELQKMGYSIAAYPVSLLSASIGAMRGALEKIHKGEKLEEGKDILP-FSDVCRQVGFEDYWEEEARYKTE 310
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: A0A7S1XX81_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX81_9STRA) HSP 1 Score: 319 bits (818), Expect = 1.900e-106 Identity = 173/261 (66.28%), Postives = 205/261 (78.54%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRR--IPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDE-----GTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKA--EEP------LDDL-LEGFEDVQRVVGFVDYDNTAAEYKL 735
MTGFGVS A G PDT L+SYAEM ASA +I + LR IPCIGDGDTGYGNA+NVKRTV+GYA G+A IMIEDQVAPKRCGHT+GKSV REEA+SRV+AACDARDE DI+++ARTDARG LG++EA+ERC++FR IGADITFLEAPQ+ EEMRRYC EV GPKLANMLE GKTPIL PA+L +G+ IAAYPL+LLSA+IKA L+ LKA ++P +DDL L+ FE+VQ VVGF Y + Y++
Sbjct: 63 MTGFGVSAARGFPDTGLVSYAEMEASARDITAALRPYGIPCIGDGDTGYGNAINVKRTVQGYAATGLAAIMIEDQVAPKRCGHTKGKSVTNREEAFSRVQAACDARDELVAQGANDILILARTDARGPLGLDEAIERCQKFREIGADITFLEAPQTVEEMRRYCTEVTGPKLANMLEQGKTPILSPAELADVGFSIAAYPLTLLSAAIKAQENALALLKATYDDPDTPTPSVDDLGLQTFENVQDVVGFPKYWDEEERYRI 323
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: D0P0N1_PHYIT (Carboxyvinyl-carboxyphosphonate phosphorylmutase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0P0N1_PHYIT) HSP 1 Score: 315 bits (808), Expect = 1.640e-105 Identity = 164/261 (62.84%), Postives = 196/261 (75.10%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGT-DIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEE----------------PLDDLLEGFEDVQRVVGFVDYDNTAAEYK 732
MTGFGVS HGLPDTQLLS+ EM+ SA+ +C +LR +PCIGDGDTGYGNA+NVKRTV+ YAQ GMAGIM+EDQVAPKRCGHT GK+VV REEA++RVRAA DAR EG DIV+MARTDARG ++EA+ RC EF R+GADITFLEAPQS +EM++YC+EV GPK+ANM+E G TP+L P QL +GYK+AAYP++LLSASIKAM L LK + L+ LL F V+ VVGF +Y A YK
Sbjct: 23 MTGFGVSAVHGLPDTQLLSFGEMVRSASTVCESLRNVPCIGDGDTGYGNAINVKRTVRAYAQAGMAGIMLEDQVAPKRCGHTAGKAVVTREEAFARVRAAVDARTEGQLDIVIMARTDARGTHSLDEAIARCNEFARLGADITFLEAPQSVDEMKQYCREVPGPKMANMVENGLTPVLLPEQLGEVGYKLAAYPITLLSASIKAMEDALRLLKCQTGGEKQEDTGNNATPNAELNKLLCDFAHVKDVVGFTEYYAEEARYK 283
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: A0A7S2SD78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD78_9STRA) HSP 1 Score: 317 bits (813), Expect = 2.400e-105 Identity = 163/248 (65.73%), Postives = 193/248 (77.82%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDE----GTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLDDLLEGFEDVQRVVGFVDYDNTAAEYK 732
MTGFGVS HG+PDTQLLSY EM A+A I S+L+ IPCIGDGDTGYGN +NV+RTV GY QVG+AGIM+EDQV+PKRCGH GKSVVGREEA R+RAA AR+E G D++++ARTDARG G++EA+ERCR FR GADITFLEAP+S EEMR YC +V+GPKLANMLE G TPILPP +L MGY IAAYPLSLL+ASI AM+ LSRL EPLDD+L F + VGF +Y +++
Sbjct: 101 MTGFGVSAVHGVPDTQLLSYGEMQAAARVITSSLQAIPCIGDGDTGYGNPMNVQRTVHGYHQVGLAGIMLEDQVSPKRCGHVAGKSVVGREEAVQRIRAAVLAREEIRAQGGDMIILARTDARGTDGMDEAIERCRRFREEGADITFLEAPESVEEMREYCDKVEGPKLANMLENGLTPILPPKELAEMGYTIAAYPLSLLAASIHAMDQALSRLALGEPLDDILCSFSRTKEAVGFSEYAKREEQFR 348
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: A0A813KL40_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KL40_POLGL) HSP 1 Score: 317 bits (811), Expect = 3.720e-105 Identity = 161/244 (65.98%), Postives = 189/244 (77.46%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGTDIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEEPLDDLLEGFEDVQRVVGFVDYDNTAAEYK 732
MTGFGVS AHG PD QL+SY EM+ +A +IC +L+RI CIGDGDTGYGNAVNVKRTV+GYAQ GMA IMIEDQVAPKRCGHTRGKSVV REEA +R+RAACDARDEG DI ++ARTDAR G+EEA+ RC+ F GADITFLEAP SE+EM RYC+EV GPKL NML GKTP+L +L+ MG+ +AAYPL+LLSA +KA L+RL+ + DL FE ++ VVGF DY YK
Sbjct: 96 MTGFGVSAAHGYPDCQLVSYQEMVDTAFHICGSLQRICCIGDGDTGYGNAVNVKRTVRGYAQAGMAAIMIEDQVAPKRCGHTRGKSVVSREEAIARIRAACDARDEGQDICILARTDARATEGLEEAIARCKAFVEAGADITFLEAPLSEDEMERYCREVPGPKLVNMLPSGKTPMLSLGRLEEMGFALAAYPLTLLSAGLKAQEEALTRLRDGKTTWDLELDFETLKDVVGFTDYYKEEDRYK 339
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Match: W2PEU5_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2PEU5_PHYPN) HSP 1 Score: 313 bits (801), Expect = 9.000e-105 Identity = 164/261 (62.84%), Postives = 192/261 (73.56%), Query Frame = 1
Query: 1 MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTRGKSVVGREEAYSRVRAACDARDEGT-DIVVMARTDARGVLGIEEALERCREFRRIGADITFLEAPQSEEEMRRYCKEVDGPKLANMLEFGKTPILPPAQLQAMGYKIAAYPLSLLSASIKAMNTVLSRLKAEE----------------PLDDLLEGFEDVQRVVGFVDYDNTAAEYK 732
MTGFGVS HGLPDTQLLS+ EM +A +C +LR +PCIGDGDTGYGNA+NVKRTV+ YAQ GMAGIM+EDQV+PKRCGHT GK+VV REEA++RVRAA DAR EG DIV+MARTDARG ++EA+ RC+EF R+GADITFLEAPQS EEM YC+EV GPK+ANM+E G TP+L P QL MGYK+AAYP++LLSASIKAM L LK + LD LL F V+ VVGF +Y YK
Sbjct: 1 MTGFGVSAVHGLPDTQLLSFGEMARTAATVCESLRNVPCIGDGDTGYGNAMNVKRTVRAYAQAGMAGIMLEDQVSPKRCGHTAGKAVVSREEAFARVRAAVDARREGQFDIVIMARTDARGTHSLDEAIARCKEFARLGADITFLEAPQSVEEMETYCREVPGPKMANMVENGLTPVLLPEQLGNMGYKLAAYPITLLSASIKAMEEALRLLKCQTGGEKKEETGNNATPSTELDKLLCDFAHVKDVVGFTEYYAEEDRYK 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53077.12635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53077.12635.1 >prot_H-elongata_contig53077.12635.1 ID=prot_H-elongata_contig53077.12635.1|Name=mRNA_H-elongata_contig53077.12635.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp MTGFGVSGAHGLPDTQLLSYAEMLASATNICSTLRRIPCIGDGDTGYGNAback to top mRNA from alignment at H-elongata_contig53077:1286..2998- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53077.12635.1 ID=mRNA_H-elongata_contig53077.12635.1|Name=mRNA_H-elongata_contig53077.12635.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1713bp|location=Sequence derived from alignment at H-elongata_contig53077:1286..2998- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53077:1286..2998- >mRNA_H-elongata_contig53077.12635.1 ID=mRNA_H-elongata_contig53077.12635.1|Name=mRNA_H-elongata_contig53077.12635.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1482bp|location=Sequence derived from alignment at H-elongata_contig53077:1286..2998- (Himanthalia elongata Himel1 dioecious)back to top |