mRNA_H-elongata_contig52692.12582.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig52692.12582.1
Unique NamemRNA_H-elongata_contig52692.12582.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 7.060e-42
Identity = 92/234 (39.32%), Postives = 129/234 (55.13%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS S+  R  + + T+ R+D+  GRVF +L G     S+GG  + ++  DDFTR   + FL++KSDA +A R  +    A  G+   + ++R D GG++ G  F S  ++L IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P G SC  +G
Sbjct:   67 CSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVG 297          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.050e-41
Identity = 94/234 (40.17%), Postives = 132/234 (56.41%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS ++  +  + + T++R+D+  GRVF++L G     S+GG  + M+  DDFTR   + FLKHKSDA  A R  +    A +G+   + ++R D GGE+ G +F S  ++L IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P G SC  +G
Sbjct:  699 CTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 929          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.060e-41
Identity = 94/234 (40.17%), Postives = 132/234 (56.41%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS ++  +  + + T++R+D+  GRVF++L G     S+GG  + M+  DDFTR   + FLKHKSDA  A R  +    A +G+   + ++R D GGE+ G +F S  ++L IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P G SC  +G
Sbjct:  406 CTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVG 636          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 8.200e-41
Identity = 95/235 (40.43%), Postives = 130/235 (55.32%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLA---PEGLQIGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS S+  R  + + T+ R+D+  GRVF++L G     S+GG  + M+  DDFTR   + FLK++SDA  A R  +    A   P  ++I  +R D GGE+ G +F S  ++L IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P G SC  +G
Sbjct:  287 CSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 517          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 3.760e-40
Identity = 93/234 (39.74%), Postives = 130/234 (55.56%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS S+  R  + + T+ R+D+  GRVF++L G     S+GG  + M+  DDFTR   + FL++KSDA +A R  +    A  G+   + ++R D GGE+ G +F S  ++L IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K+D+LWAEAM +AC+  N    S+      PYE+WYG  P      PF    Y R  +P  KL P G SC  +G
Sbjct:  165 CSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 395          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 5.760e-40
Identity = 94/234 (40.17%), Postives = 130/234 (55.56%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS S+  R  +   T+ R+D+  GRVF++L G     S+GG  + M+  DDFTR   + FL++KSDA +A R  +    A  G+   + ++R D GGE+ G +F S  ++L IK+E TP Y+PQYNGV ER LGL+ +  +A       L   V   K+D+LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P G SC  +G
Sbjct:  220 CSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRA-NGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVG 450          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.720e-39
Identity = 94/235 (40.00%), Postives = 131/235 (55.74%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGR-RPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS  +  R A+   T N +D+  GRVF+NL G     S+GG  + M+  DDFTR   + FL+ KSDA +A R  + +  A +G+   I ++R D GGE+ G +F S  ++L IK+E TP ++P++NGV ER LGL+ +  +A       L   V   K+DRLWAEAM +AC+  N    S+     SPYE+WYG  RP      PF    Y +  +P  KL P G SC  +G
Sbjct:  426 CSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRA-DGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY--PFLKPAYCKWQRPS-KLLPKGESCFYVG 656          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.310e-39
Identity = 92/234 (39.32%), Postives = 129/234 (55.13%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQ--IGVIRMDGGGEWHG-QFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLRRSKPEHKLAPHGASCIILG 672
            C  CS S+  +  +   T+ R+D+  GRVF++L G     S+GG  + M+  DDFTR   + FLK KSDA +A R  +    A +G+   + ++R D GGE+ G +F S  ++L IK+E TP Y+PQYNGV ER LGL+    +A       L   V   K+DRLWAEAM +AC+  N    S+     SPYE+W+G   +     PF    Y R  +P  KL P G +C  +G
Sbjct:  605 CTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRA-DGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEA-SHARPYPFLKPAYCRWQRPS-KLLPKGEACFYVG 835          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.160e-38
Identity = 88/205 (42.93%), Postives = 117/205 (57.07%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPE-GLQIGVIRMDGGGEWHGQFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVALLRGVMEGKSDR-----LWAEAMAYACDMGNRCTSSSLDSG-TSPYELWYGRRPTFDNIPPF 594
            C+ CS S+ +   + KST+ RA     R+F+NL G     S+GGN + ++  DD TR+  V FLKHKSDA  A    + DY A     ++ V R DGGGE+ GQF     + GIK+E TPP TP+YNGV ERALGLL D  +A      E   D      LWAEA++ AC   N CT+++ + G  SP EL++G  P   +  PF
Sbjct:  169 CLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMN-CTATTGNPGHKSPEELFHGTPPPVGSTHPF 372          
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 9.470e-35
Identity = 87/237 (36.71%), Postives = 123/237 (51.90%), Query Frame = 1
Query:    1 CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVMLCIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEG-LQIGVIRMDGGGEW-HGQFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVA-------LLRGVMEGKSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGAVGYLR----RSKPEHKLAPHGASCIILG 672
            C+ CS ++     +P  T  RA +   R F+ LSG     SLGG  + ++  DD+TR+  V FLKHKSDA  A    + +  A      + V+R D GGE+  G+F     K  IK+E TP ++P+YNGV ERALGL+ D  +A       L  G    +S  LWAEA+A++C+  N  +++S     SPYE+W+G  P     PP     +L+    + K  HK  P    C  LG
Sbjct:  341 CLGCSTAKGLSEPIPNKTSTRAFKKLQRFFVELSGKARAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAIAARIQAPTLYPGAPNYRS--LWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPP-----PPGATYPFLKPAVYKVKRTHKSEPTAQKCFYLG 570          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52692.12582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVR5_9PHAE7.060e-4239.32Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBA7_9PHAE1.050e-4140.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE1.060e-4140.17Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV76_9PHAE8.200e-4140.43Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5L3Y0_9PHAE3.760e-4039.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE5.760e-4040.17Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JH25_9PHAE2.720e-3940.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE3.310e-3939.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL52_9PHAE2.160e-3842.93Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1N9_9PHAE9.470e-3536.71Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52692contigH-elongata_contig52692:2361..3032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score125.6
Seed ortholog evalue3e-26
Seed eggNOG ortholog4558.Sb07g028153.1
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs37THH@33090,3GG2K@35493,3IMWS@38820,3M2QC@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size672
Cds size672
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930860.7127771-CDS-H-elongata_contig52692:2360..30321622930860.7127771-CDS-H-elongata_contig52692:2360..3032Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52692 2361..3032 +
1691679601.4808874-CDS-H-elongata_contig52692:2360..30321691679601.4808874-CDS-H-elongata_contig52692:2360..3032Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig52692 2361..3032 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52692.12582.1prot_H-elongata_contig52692.12582.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig52692 2361..3032 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig52692.12582.1

>prot_H-elongata_contig52692.12582.1 ID=prot_H-elongata_contig52692.12582.1|Name=mRNA_H-elongata_contig52692.12582.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=224bp
CVHCSESRVRRYAVPKSTENRADRPAGRVFINLSGPFHETSLGGNRFVML
CIDDFTRFKMVRFLKHKSDATNALRDIINDYLAPEGLQIGVIRMDGGGEW
HGQFLSFLSKLGIKRESTPPYTPQYNGVVERALGLLGDKTVALLRGVMEG
KSDRLWAEAMAYACDMGNRCTSSSLDSGTSPYELWYGRRPTFDNIPPFGA
VGYLRRSKPEHKLAPHGASCIILG
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mRNA from alignment at H-elongata_contig52692:2361..3032+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig52692.12582.1 ID=mRNA_H-elongata_contig52692.12582.1|Name=mRNA_H-elongata_contig52692.12582.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=672bp|location=Sequence derived from alignment at H-elongata_contig52692:2361..3032+ (Himanthalia elongata Himel1 dioecious)
TGCGTTCACTGTTCCGAATCTAGGGTGCGACGATACGCCGTGCCTAAATC CACGGAGAATCGGGCTGACAGACCCGCGGGACGAGTGTTTATTAACCTCT CAGGCCCCTTTCACGAGACTTCTCTCGGAGGAAACAGATTCGTCATGCTG TGCATTGACGACTTCACCCGCTTCAAAATGGTCCGTTTCCTCAAGCACAA GAGCGATGCCACGAATGCGTTAAGGGACATAATCAACGACTACCTCGCGC CCGAGGGACTTCAGATCGGCGTCATCCGCATGGACGGTGGGGGAGAATGG CACGGCCAGTTCCTGTCTTTTCTGAGTAAGCTCGGGATCAAGCGCGAGTC CACACCCCCATATACCCCCCAATATAATGGTGTCGTGGAGCGCGCTCTGG GGCTACTGGGCGACAAGACCGTGGCTTTGCTGCGAGGTGTAATGGAGGGT AAGAGCGACCGTCTATGGGCGGAAGCTATGGCGTACGCATGCGATATGGG GAACCGATGTACCTCCTCCTCCCTCGACAGCGGCACCTCGCCATATGAGC TTTGGTACGGCAGACGTCCGACATTCGACAACATCCCCCCATTCGGGGCC GTGGGATATCTGCGACGGTCGAAGCCGGAGCACAAACTAGCCCCCCACGG GGCGAGCTGCATCATACTTGGG
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Coding sequence (CDS) from alignment at H-elongata_contig52692:2361..3032+

>mRNA_H-elongata_contig52692.12582.1 ID=mRNA_H-elongata_contig52692.12582.1|Name=mRNA_H-elongata_contig52692.12582.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1344bp|location=Sequence derived from alignment at H-elongata_contig52692:2361..3032+ (Himanthalia elongata Himel1 dioecious)
TGCGTTCACTGTTCCGAATCTAGGGTGCGACGATACGCCGTGCCTAAATC
CACGGAGAATCGGGCTGACAGACCCGCGGGACGAGTGTTTATTAACCTCT
CAGGCCCCTTTCACGAGACTTCTCTCGGAGGAAACAGATTCGTCATGCTG
TGCATTGACGACTTCACCCGCTTCAAAATGGTCCGTTTCCTCAAGCACAA
GAGCGATGCCACGAATGCGTTAAGGGACATAATCAACGACTACCTCGCGC
CCGAGGGACTTCAGATCGGCGTCATCCGCATGGACGGTGGGGGAGAATGG
CACGGCCAGTTCCTGTCTTTTCTGAGTAAGCTCGGGATCAAGCGCGAGTC
CACACCCCCATATACCCCCCAATATAATGGTGTCGTGGAGCGCGCTCTGG
GGCTACTGGGCGACAAGACCGTGGCTTTGCTGCGAGGTGTAATGGAGGGT
AAGAGCGACCGTCTATGGGCGGAAGCTATGGCGTACGCATGCGATATGGG
GAACCGATGTACCTCCTCCTCCCTCGACAGCGGCACCTCGCCATATGAGC
TTTGGTACGGCAGACGTCCGACATTCGACAACATCCCCCCATTCGGGGCC
GTGGGATATCTGCGACGGTCGAAGCCGGAGCACAAACTAGCCCCCCACGG
GGCGAGCTGCATCATACTTGGGTGCGTTCACTGTTCCGAATCTAGGGTGC
GACGATACGCCGTGCCTAAATCCACGGAGAATCGGGCTGACAGACCCGCG
GGACGAGTGTTTATTAACCTCTCAGGCCCCTTTCACGAGACTTCTCTCGG
AGGAAACAGATTCGTCATGCTGTGCATTGACGACTTCACCCGCTTCAAAA
TGGTCCGTTTCCTCAAGCACAAGAGCGATGCCACGAATGCGTTAAGGGAC
ATAATCAACGACTACCTCGCGCCCGAGGGACTTCAGATCGGCGTCATCCG
CATGGACGGTGGGGGAGAATGGCACGGCCAGTTCCTGTCTTTTCTGAGTA
AGCTCGGGATCAAGCGCGAGTCCACACCCCCATATACCCCCCAATATAAT
GGTGTCGTGGAGCGCGCTCTGGGGCTACTGGGCGACAAGACCGTGGCTTT
GCTGCGAGGTGTAATGGAGGGTAAGAGCGACCGTCTATGGGCGGAAGCTA
TGGCGTACGCATGCGATATGGGGAACCGATGTACCTCCTCCTCCCTCGAC
AGCGGCACCTCGCCATATGAGCTTTGGTACGGCAGACGTCCGACATTCGA
CAACATCCCCCCATTCGGGGCCGTGGGATATCTGCGACGGTCGAAGCCGG
AGCACAAACTAGCCCCCCACGGGGCGAGCTGCATCATACTTGGG
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