mRNA_H-elongata_contig51797.12456.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI) HSP 1 Score: 347 bits (890), Expect = 1.140e-116 Identity = 181/304 (59.54%), Postives = 226/304 (74.34%), Query Frame = 1
Query: 1 EMTTGRFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSA-APAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISPAQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDED 909
+M GRFL++VTGASRGFGRCVAEEFVR+VAP NPV+LVL+ARS GL+S +++EI +I VVVR+ DLGDL+ L A L+G+FS + DP+RY+RAVLVNNAGSLGHIG A+ LPSLA RSEMDFN TSA+WLSSRF+AVFG ++ L V + E+ G +A A A NN+VVNISS AA +P E+WGGYS+GKA R+MFHRVLA EQA +GGLK+LNYAPGPM TDMS ++ S Q+E+D+Q+GKL+D +SA+KC+RL L G F SG+H+D FDED
Sbjct: 5 QMNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGVVVRKEPLDLGDLDHLEANLEGVFSRI-DPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPN-LSSGNSVEGTLGESGADVDKNGATTAATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHRVLATEQASIGGLKVLNYAPGPMNTDMSRDIRSAEQFEEDLQSGKLIDARVSAEKCVRLALHGTFASGSHVDFFDED 306
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A7S1CY78_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY78_CYCTE) HSP 1 Score: 167 bits (424), Expect = 1.560e-46 Identity = 104/304 (34.21%), Postives = 158/304 (51.97%), Query Frame = 1
Query: 22 LMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISPAQYEKDV--------QNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDED 909
L+IVTGASRG GR +A F + + VE VLIARS GL +AI+++ + V + DL +L+ L++ +D I G+ ++Y + ++VNNAGSLGH+G N + SL ++ +FN S+ W S+RF+ K+E +D V +++ISS A +P + Y AGKA +M+H LA E V ILNYAPGP+ T+M+ L S ++D+ + G++V ++ + ++LVLSG+FESGAH+D FD D
Sbjct: 27 LLIVTGASRGLGRAIALSFCSSIPSSSTVEAVLIARSKDGLDETKAAIEKLGV------NAQVTNHVMDLSNLDLLDSNVDTIIGGVKPFAQYEKILVVNNAGSLGHVGPINAMESLEVMKEFTNFNVASSFWFSTRFSKEIVAAKAETKEDLSAV---------------------------------IIHISSLCAVQPFATMASYCAGKAANDMYHTTLAKENPTV---PILNYAPGPLDTEMTTTLRSSDSLDRDLHSFFQSSHEKGEMVPLEKTSARLVKLVLSGEFESGAHVDYFDLD 288
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: B7FX65_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX65_PHATC) HSP 1 Score: 164 bits (416), Expect = 1.450e-45 Identity = 115/309 (37.22%), Postives = 157/309 (50.81%), Query Frame = 1
Query: 4 MTTGRFLMIVTGASRGFGRCVAEEFVR-KVAPFNP----VELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLA-DPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISPAQYEKDVQ---NGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD 903
M L+++TGASRG GR +A EF ++ + P + VLIARS GL+ +AI+ T D++ + V ++ DL DL L+ +LD +F + D +Y R VLVNNAGSLG +G E PSL+ +R +DFN TSA+W + RF +R E DA +VNISS A +P + YSA KA R+ + A E +K LNYAPGP+ TDM+ EL A+ + +++ L+DPN SAK RLV FESG HID FD
Sbjct: 1 MPVTNLLLVITGASRGLGRAIANEFCGPSLSGYWPSLRYIRAVLIARSTSGLEETRTAIEANTRK-SDLN-IRVDLHSIDLSDLNTLDHKLDAVFQQIQNDQIKYDRVVLVNNAGSLGALGPCLESPSLSDMRQTVDFNVTSALWTTVRFGRF--IRDDERTNDA---------------------------------TTTIVNISSLVAVQPFPTMAIYSAVKAARDSYQEAFAQELNGDTNVKFLNYAPGPLETDMANELRKDARLDDNLKPHFQKTLIDPNASAKTLARLVAENSFESGKHIDYFD 272
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: W7U863_9STRA (Sepiapterin reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U863_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.240e-43 Identity = 122/333 (36.64%), Postives = 163/333 (48.95%), Query Frame = 1
Query: 16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNA--FDLGDLERLNARLDGIFSGLADPS-----------RYARAVLVNNAGSLGHIGYANEL-PSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQ----------AKVGG----LKILNYAPGPMATDMSLEL-----ISPAQYE---KDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDE 906
RFL+ +TGASRGFGRC+A E RK P V++ LIAR+ L +V +I ++ D S++ VR FDLG+LE L IF+ + + S +Y L NNAGS+G I YA +L L LR +D N TS++ ++S F F S + K P ++NISS AA +P SWG Y AGKA R+MF +V+A E + GG LK LNYAPGP+ TDM +EL I P E K + G LV P SA KC+R++ F+SG HID +D+
Sbjct: 8 RFLVFITGASRGFGRCLALEAARKWGP--AVDMHLIARNAEALTAVKR---DIEASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRFCTLSSPSNK---------------------------------VPALFIINISSMAAIQPFHSWGVYCAGKAARDMFLQVVAQEHQGEGSARGEGSMAGGMSVHLKTLNYAPGPLDTDMQIELRESESIHPPTREWSEKAFREGWLVRPEESASKCLRILTKNDFKSGVHIDYYDD 302
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A7S1U7H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.070e-42 Identity = 110/313 (35.14%), Postives = 164/313 (52.40%), Query Frame = 1
Query: 25 MIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAI-----DEITMAIPDVSEVVVRQNAFDLGDLERLNA----RLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELI-SPAQYE-------KDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
+++TGASRGFGR VA R+ + L+L+ARS L+ A+ + + +P + V A DL +LE A +D + GLA R +LVNNAG++G +G E+ S+ +++EMD N TSAM++++ F FG +++ L A+ G G P P ++N+SS AA +P +SWG Y AGKA RE+FH LA EQA +LNYAPGPM T M E+ S A ++ + ++G LV P SA K ++L+ +F SG+H+D +D+ P
Sbjct: 7 VVITGASRGFGRAVAVAMAREWV--CQLTLMLVARSSESLQETAAMLLRERSKTEGIEMPMDQSMAVSVAAVDLRNLEETEAWAKQAVDKL-KGLAPD----RIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGAPRADRLH------------AEENGHAGAAAGGMGMPPAPPRPQTFIINVSSLAAREPFQSWGMYCAGKAAREIFHAALAKEQAHCDSFYVLNYAPGPMDTAMQAEIRNSEATFQPLREASTQAFEDGNLVRPEDSANKLLQLIEDAEFISGSHLDFYDDMP 300
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A8K1FK79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK79_PYTOL) HSP 1 Score: 157 bits (397), Expect = 1.290e-42 Identity = 105/312 (33.65%), Postives = 161/312 (51.60%), Query Frame = 1
Query: 16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQ--NAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGG---LKILNYAPGPMATDMSLEL-----ISP---AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
R +++TGASRGFGRC+A +F R++ V++ L+AR L + E + + +E ++ DLGD + D I L + Y R LV+NAGS+G + + ELPS A L +FN S +W + RF V+G + E L DAP +S + Q+ +VNISS A KP +++G Y GKA REM HRV+A EQ G +++++Y+PGPM TDM + + P AQ+ K +G L+ P +S++ ++ +L +FESGA++ +D P
Sbjct: 2 RSAVVITGASRGFGRCLALDFTREITA-GDVDMFLLARHEGDLGETVRLVTEAWASKANAAESKLQTFVKTVDLGDQVDYVTKFDAILEQL-QATAYDRVYLVHNAGSIGDLCFTQELPSPAELAQYWEFNVNSVVWFNKRFLDVYGATREELLSDAP-----LSASYQA----------------------FIVNISSGCAIKPFKTYGMYCTGKAAREMHHRVIATEQQPKQGTPKIRVVSYSPGPMDTDMQTLVRESSGVHPEMAAQFRKMKDDGTLIAPEVSSRLGVQHILMNEFESGAYVYYYDIAP 284
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A836CM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.210e-42 Identity = 115/327 (35.17%), Postives = 156/327 (47.71%), Query Frame = 1
Query: 19 FLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPN------------------------NLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISP--------AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD 903
+L+IVTGASRG GRC+A+E VR + + + L+L+ARS GL A++I + +V + DLG+L L L FSGL D Y R VL NNAGSLG + A +L S A LR +D N TSAMW++ F + R + ++VVNISS AA KP +W Y AGKA R+MFH LA E + L++L+YAPGP+ TDM + + A + ++G LV P+ SA +C+RLV G +E GAH+D FD
Sbjct: 6 WLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLMETAASIRGMNS-----EDVTIEVQPVDLGNLSTLETSLQNAFSGL-DARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFHAALAAEH-RASQLRVLSYAPGPLDTDMQARIRAADGCAPELRAFFATMQRDGALVRPSESAARCVRLVREGCWECGAHVDFFD 324
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: UPI001D29C977 (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001D29C977) HSP 1 Score: 152 bits (385), Expect = 1.380e-40 Identity = 112/318 (35.22%), Postives = 162/318 (50.94%), Query Frame = 1
Query: 16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKS----------VASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLAT-LRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLE-----LISP---AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
R ++VTGASRGFGRC+ +FVR++ V+L L ARS LK V ++ D E+ + DL + + ++D + L S Y + LV+NAGSLG +G E S T L ++ N TS +WL+ RF VFG + E A +AAPAK ++VNI+S +P ++ Y GKA REM HRV+A EQA VG +++L+Y+PGPM TDM L+SP Q+ G L+ P +S+ + ++L LSG++E+GAH+D +D DP
Sbjct: 3 RSAVLVTGASRGFGRCLTLDFVRQLKD-QDVDLHLWARSEGELKETERLARAEWEVQASTDSTASNTTSRRELRCFLQSVDLSNPVDYSLKVDQVLLQLTAQS-YDQVFLVHNAGSLGQLGLVQECASSPTELAQYLELNVTSVLWLNKRFLDVFGASREEISAAA--------------------AAAAPAKAQ--ITELVIVNITSLCGIEPFKTHMMYCTGKAAREMNHRVIATEQALVGKVRVLSYSPGPMDTDMQKTIRDSPLVSPDLRKQFADMKAQGTLIPPAVSSLRGVKLALSGEYENGAHVDYYDLDP 296
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A2D4BMD0_PYTIN (Sepiapterin reductase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMD0_PYTIN) HSP 1 Score: 150 bits (380), Expect = 3.740e-40 Identity = 114/305 (37.38%), Postives = 155/305 (50.82%), Query Frame = 1
Query: 25 MIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEM-DFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGG---LKILNYAPGPMATDMSLEL-----ISP---AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD 903
++VTGASRGFGRC+A +F R++ + V+LVL AR L+ AS A +E+ V A DL + A +D + L +YAR LV+NAGSLG +GY +E S S +FN TS MWL+ RF VFG+ EH S+A + +VNI+S +P + G Y KA REM HRVLA E G ++IL+Y+PGPM TDM L + P A + K +G L+ P S+++ +RLVLS FESGAH+D +D
Sbjct: 5 VVVTGASRGFGRCLALDFCREIRNSH-VDLVLWARHDADLQETASLARSAWSAAAG-NELRVSVRAVDLSQPAQYAAAVDELLVQL-QAEQYARIYLVHNAGSLGELGYPDEWTSSPAAYSAFWEFNVTSVMWLNKRFLDVFGL---------------------------EHASSATTALS-------IVNITSLCGIEPFRTHGWYCTSKAAREMHHRVLAAEYDGSNGRRRVRILSYSPGPMDTDMQSTLRESSRVHPEYVAMFNKLKADGTLLAPEASSRRGVRLVLSDSFESGAHVDYYD 272
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A6A3RA53_9STRA (Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RA53_9STRA) HSP 1 Score: 149 bits (377), Expect = 9.880e-40 Identity = 108/308 (35.06%), Postives = 155/308 (50.32%), Query Frame = 1
Query: 16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLAT-LRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLEL-----ISPA---QYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
R ++VTGASRGFGRC+A +F R + +EL L ARS LK + +E+ DL + A++D + LA S YAR LV+NAGSLG +G +E S T L + N TS +WL+ RF VFG + E L TS +T ++VNI+S +P ++ Y +GKA REM HRV+A EQ G +++L Y+PGPM TDM + + P Q+E G L+ P S+++ ++L +SG +E+GAH+D +D DP
Sbjct: 2 RSAVLVTGASRGFGRCLALDFARLLKT-QDLELHLWARSESDLKETERLVRS---EWGTAAELRCFVQCVDLSNPADYAAKVDQVLLQLAAQS-YARVFLVHNAGSLGQLGLVHECASNPTELAQYWELNVTSVLWLNKRFLDVFGASRDELLA----ATSAEEKT-----------------------QLVIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQEAAGKVRVLQYSPGPMDTDMQKTIRESPRVDPELRKQFEDMKAQGTLIPPAQSSQRGVKLAISGDYETGAHVDYYDLDP 277 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51797.12456.1 >prot_H-elongata_contig51797.12456.1 ID=prot_H-elongata_contig51797.12456.1|Name=mRNA_H-elongata_contig51797.12456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=305bp MTTGRFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVback to top mRNA from alignment at H-elongata_contig51797:751..3000- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51797.12456.1 ID=mRNA_H-elongata_contig51797.12456.1|Name=mRNA_H-elongata_contig51797.12456.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2250bp|location=Sequence derived from alignment at H-elongata_contig51797:751..3000- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51797:751..3000- >mRNA_H-elongata_contig51797.12456.1 ID=mRNA_H-elongata_contig51797.12456.1|Name=mRNA_H-elongata_contig51797.12456.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1830bp|location=Sequence derived from alignment at H-elongata_contig51797:751..3000- (Himanthalia elongata Himel1 dioecious)back to top |