mRNA_H-elongata_contig51797.12456.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig51797.12456.1
Unique NamemRNA_H-elongata_contig51797.12456.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: D7FQR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.140e-116
Identity = 181/304 (59.54%), Postives = 226/304 (74.34%), Query Frame = 1
Query:    1 EMTTGRFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSA-APAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISPAQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDED 909
            +M  GRFL++VTGASRGFGRCVAEEFVR+VAP NPV+LVL+ARS  GL+S   +++EI  +I     VVVR+   DLGDL+ L A L+G+FS + DP+RY+RAVLVNNAGSLGHIG A+ LPSLA  RSEMDFN TSA+WLSSRF+AVFG ++   L     V   + E+       G   +A A A       NN+VVNISS AA +P E+WGGYS+GKA R+MFHRVLA EQA +GGLK+LNYAPGPM TDMS ++ S  Q+E+D+Q+GKL+D  +SA+KC+RL L G F SG+H+D FDED
Sbjct:    5 QMNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGVVVRKEPLDLGDLDHLEANLEGVFSRI-DPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPN-LSSGNSVEGTLGESGADVDKNGATTAATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHRVLATEQASIGGLKVLNYAPGPMNTDMSRDIRSAEQFEEDLQSGKLIDARVSAEKCVRLALHGTFASGSHVDFFDED 306          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A7S1CY78_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY78_CYCTE)

HSP 1 Score: 167 bits (424), Expect = 1.560e-46
Identity = 104/304 (34.21%), Postives = 158/304 (51.97%), Query Frame = 1
Query:   22 LMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISPAQYEKDV--------QNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDED 909
            L+IVTGASRG GR +A  F   +   + VE VLIARS  GL    +AI+++ +         V  +  DL +L+ L++ +D I  G+   ++Y + ++VNNAGSLGH+G  N + SL  ++   +FN  S+ W S+RF+      K+E  +D   V                                 +++ISS  A +P  +   Y AGKA  +M+H  LA E   V    ILNYAPGP+ T+M+  L S    ++D+        + G++V    ++ + ++LVLSG+FESGAH+D FD D
Sbjct:   27 LLIVTGASRGLGRAIALSFCSSIPSSSTVEAVLIARSKDGLDETKAAIEKLGV------NAQVTNHVMDLSNLDLLDSNVDTIIGGVKPFAQYEKILVVNNAGSLGHVGPINAMESLEVMKEFTNFNVASSFWFSTRFSKEIVAAKAETKEDLSAV---------------------------------IIHISSLCAVQPFATMASYCAGKAANDMYHTTLAKENPTV---PILNYAPGPLDTEMTTTLRSSDSLDRDLHSFFQSSHEKGEMVPLEKTSARLVKLVLSGEFESGAHVDYFDLD 288          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: B7FX65_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX65_PHATC)

HSP 1 Score: 164 bits (416), Expect = 1.450e-45
Identity = 115/309 (37.22%), Postives = 157/309 (50.81%), Query Frame = 1
Query:    4 MTTGRFLMIVTGASRGFGRCVAEEFVR-KVAPFNP----VELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLA-DPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISPAQYEKDVQ---NGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD 903
            M     L+++TGASRG GR +A EF    ++ + P    +  VLIARS  GL+   +AI+  T    D++ + V  ++ DL DL  L+ +LD +F  +  D  +Y R VLVNNAGSLG +G   E PSL+ +R  +DFN TSA+W + RF     +R  E   DA                                    +VNISS  A +P  +   YSA KA R+ +    A E      +K LNYAPGP+ TDM+ EL   A+ + +++      L+DPN SAK   RLV    FESG HID FD
Sbjct:    1 MPVTNLLLVITGASRGLGRAIANEFCGPSLSGYWPSLRYIRAVLIARSTSGLEETRTAIEANTRK-SDLN-IRVDLHSIDLSDLNTLDHKLDAVFQQIQNDQIKYDRVVLVNNAGSLGALGPCLESPSLSDMRQTVDFNVTSALWTTVRFGRF--IRDDERTNDA---------------------------------TTTIVNISSLVAVQPFPTMAIYSAVKAARDSYQEAFAQELNGDTNVKFLNYAPGPLETDMANELRKDARLDDNLKPHFQKTLIDPNASAKTLARLVAENSFESGKHIDYFD 272          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: W7U863_9STRA (Sepiapterin reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U863_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.240e-43
Identity = 122/333 (36.64%), Postives = 163/333 (48.95%), Query Frame = 1
Query:   16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNA--FDLGDLERLNARLDGIFSGLADPS-----------RYARAVLVNNAGSLGHIGYANEL-PSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQ----------AKVGG----LKILNYAPGPMATDMSLEL-----ISPAQYE---KDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDE 906
            RFL+ +TGASRGFGRC+A E  RK  P   V++ LIAR+   L +V     +I  ++ D S++ VR     FDLG+LE L      IF+ + + S           +Y    L NNAGS+G I YA +L   L  LR  +D N TS++ ++S F   F    S + K                                  P   ++NISS AA +P  SWG Y AGKA R+MF +V+A E           +  GG    LK LNYAPGP+ TDM +EL     I P   E   K  + G LV P  SA KC+R++    F+SG HID +D+
Sbjct:    8 RFLVFITGASRGFGRCLALEAARKWGP--AVDMHLIARNAEALTAVKR---DIEASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRFCTLSSPSNK---------------------------------VPALFIINISSMAAIQPFHSWGVYCAGKAARDMFLQVVAQEHQGEGSARGEGSMAGGMSVHLKTLNYAPGPLDTDMQIELRESESIHPPTREWSEKAFREGWLVRPEESASKCLRILTKNDFKSGVHIDYYDD 302          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A7S1U7H4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.070e-42
Identity = 110/313 (35.14%), Postives = 164/313 (52.40%), Query Frame = 1
Query:   25 MIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAI-----DEITMAIPDVSEVVVRQNAFDLGDLERLNA----RLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELI-SPAQYE-------KDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
            +++TGASRGFGR VA    R+      + L+L+ARS   L+  A+ +         + +P    + V   A DL +LE   A     +D +  GLA      R +LVNNAG++G +G   E+ S+  +++EMD N TSAM++++ F   FG  +++ L             A+  G  G           P  P   ++N+SS AA +P +SWG Y AGKA RE+FH  LA EQA      +LNYAPGPM T M  E+  S A ++       +  ++G LV P  SA K ++L+   +F SG+H+D +D+ P
Sbjct:    7 VVITGASRGFGRAVAVAMAREWV--CQLTLMLVARSSESLQETAAMLLRERSKTEGIEMPMDQSMAVSVAAVDLRNLEETEAWAKQAVDKL-KGLAPD----RIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGAPRADRLH------------AEENGHAGAAAGGMGMPPAPPRPQTFIINVSSLAAREPFQSWGMYCAGKAAREIFHAALAKEQAHCDSFYVLNYAPGPMDTAMQAEIRNSEATFQPLREASTQAFEDGNLVRPEDSANKLLQLIEDAEFISGSHLDFYDDMP 300          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A8K1FK79_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK79_PYTOL)

HSP 1 Score: 157 bits (397), Expect = 1.290e-42
Identity = 105/312 (33.65%), Postives = 161/312 (51.60%), Query Frame = 1
Query:   16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQ--NAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGG---LKILNYAPGPMATDMSLEL-----ISP---AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
            R  +++TGASRGFGRC+A +F R++     V++ L+AR    L      + E   +  + +E  ++      DLGD      + D I   L   + Y R  LV+NAGS+G + +  ELPS A L    +FN  S +W + RF  V+G  + E L DAP     +S + Q+                       +VNISS  A KP +++G Y  GKA REM HRV+A EQ    G   +++++Y+PGPM TDM   +     + P   AQ+ K   +G L+ P +S++  ++ +L  +FESGA++  +D  P
Sbjct:    2 RSAVVITGASRGFGRCLALDFTREITA-GDVDMFLLARHEGDLGETVRLVTEAWASKANAAESKLQTFVKTVDLGDQVDYVTKFDAILEQL-QATAYDRVYLVHNAGSIGDLCFTQELPSPAELAQYWEFNVNSVVWFNKRFLDVYGATREELLSDAP-----LSASYQA----------------------FIVNISSGCAIKPFKTYGMYCTGKAAREMHHRVIATEQQPKQGTPKIRVVSYSPGPMDTDMQTLVRESSGVHPEMAAQFRKMKDDGTLIAPEVSSRLGVQHILMNEFESGAYVYYYDIAP 284          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A836CM32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.210e-42
Identity = 115/327 (35.17%), Postives = 156/327 (47.71%), Query Frame = 1
Query:   19 FLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPN------------------------NLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLELISP--------AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD 903
            +L+IVTGASRG GRC+A+E VR +   + + L+L+ARS  GL   A++I  +        +V +     DLG+L  L   L   FSGL D   Y R VL NNAGSLG +  A +L S A LR  +D N TSAMW++  F  +   R  +                                                               ++VVNISS AA KP  +W  Y AGKA R+MFH  LA E  +   L++L+YAPGP+ TDM   + +         A +    ++G LV P+ SA +C+RLV  G +E GAH+D FD
Sbjct:    6 WLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLMETAASIRGMNS-----EDVTIEVQPVDLGNLSTLETSLQNAFSGL-DARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFHAALAAEH-RASQLRVLSYAPGPLDTDMQARIRAADGCAPELRAFFATMQRDGALVRPSESAARCVRLVREGCWECGAHVDFFD 324          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: UPI001D29C977 (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=UPI001D29C977)

HSP 1 Score: 152 bits (385), Expect = 1.380e-40
Identity = 112/318 (35.22%), Postives = 162/318 (50.94%), Query Frame = 1
Query:   16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKS----------VASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLAT-LRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLE-----LISP---AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
            R  ++VTGASRGFGRC+  +FVR++     V+L L ARS   LK           V ++ D          E+     + DL +    + ++D +   L   S Y +  LV+NAGSLG +G   E  S  T L   ++ N TS +WL+ RF  VFG  + E    A                     +AAPAK        ++VNI+S    +P ++   Y  GKA REM HRV+A EQA VG +++L+Y+PGPM TDM        L+SP    Q+      G L+ P +S+ + ++L LSG++E+GAH+D +D DP
Sbjct:    3 RSAVLVTGASRGFGRCLTLDFVRQLKD-QDVDLHLWARSEGELKETERLARAEWEVQASTDSTASNTTSRRELRCFLQSVDLSNPVDYSLKVDQVLLQLTAQS-YDQVFLVHNAGSLGQLGLVQECASSPTELAQYLELNVTSVLWLNKRFLDVFGASREEISAAA--------------------AAAAPAKAQ--ITELVIVNITSLCGIEPFKTHMMYCTGKAAREMNHRVIATEQALVGKVRVLSYSPGPMDTDMQKTIRDSPLVSPDLRKQFADMKAQGTLIPPAVSSLRGVKLALSGEYENGAHVDYYDLDP 296          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A2D4BMD0_PYTIN (Sepiapterin reductase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMD0_PYTIN)

HSP 1 Score: 150 bits (380), Expect = 3.740e-40
Identity = 114/305 (37.38%), Postives = 155/305 (50.82%), Query Frame = 1
Query:   25 MIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLATLRSEM-DFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGG---LKILNYAPGPMATDMSLEL-----ISP---AQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD 903
            ++VTGASRGFGRC+A +F R++   + V+LVL AR    L+  AS       A    +E+ V   A DL    +  A +D +   L    +YAR  LV+NAGSLG +GY +E  S     S   +FN TS MWL+ RF  VFG+                           EH S+A    +       +VNI+S    +P  + G Y   KA REM HRVLA E     G   ++IL+Y+PGPM TDM   L     + P   A + K   +G L+ P  S+++ +RLVLS  FESGAH+D +D
Sbjct:    5 VVVTGASRGFGRCLALDFCREIRNSH-VDLVLWARHDADLQETASLARSAWSAAAG-NELRVSVRAVDLSQPAQYAAAVDELLVQL-QAEQYARIYLVHNAGSLGELGYPDEWTSSPAAYSAFWEFNVTSVMWLNKRFLDVFGL---------------------------EHASSATTALS-------IVNITSLCGIEPFRTHGWYCTSKAAREMHHRVLAAEYDGSNGRRRVRILSYSPGPMDTDMQSTLRESSRVHPEYVAMFNKLKADGTLLAPEASSRRGVRLVLSDSFESGAHVDYYD 272          
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Match: A0A6A3RA53_9STRA (Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RA53_9STRA)

HSP 1 Score: 149 bits (377), Expect = 9.880e-40
Identity = 108/308 (35.06%), Postives = 155/308 (50.32%), Query Frame = 1
Query:   16 RFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSVASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYARAVLVNNAGSLGHIGYANELPSLAT-LRSEMDFNFTSAMWLSSRFTAVFGVRKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNISSKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMATDMSLEL-----ISPA---QYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFDEDP 912
            R  ++VTGASRGFGRC+A +F R +     +EL L ARS   LK     +          +E+       DL +     A++D +   LA  S YAR  LV+NAGSLG +G  +E  S  T L    + N TS +WL+ RF  VFG  + E L      TS   +T                         ++VNI+S    +P ++   Y +GKA REM HRV+A EQ   G +++L Y+PGPM TDM   +     + P    Q+E     G L+ P  S+++ ++L +SG +E+GAH+D +D DP
Sbjct:    2 RSAVLVTGASRGFGRCLALDFARLLKT-QDLELHLWARSESDLKETERLVRS---EWGTAAELRCFVQCVDLSNPADYAAKVDQVLLQLAAQS-YARVFLVHNAGSLGQLGLVHECASNPTELAQYWELNVTSVLWLNKRFLDVFGASRDELLA----ATSAEEKT-----------------------QLVIVNITSLCGIEPFKTHMMYCSGKAAREMHHRVIATEQEAAGKVRVLQYSPGPMDTDMQKTIRESPRVDPELRKQFEDMKAQGTLIPPAQSSQRGVKLAISGDYETGAHVDYYDLDP 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51797.12456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQR4_ECTSI1.140e-11659.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CY78_CYCTE1.560e-4634.21Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7FX65_PHATC1.450e-4537.22Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7U863_9STRA1.240e-4336.64Sepiapterin reductase n=1 Tax=Nannochloropsis gadi... [more]
A0A7S1U7H4_9STRA1.070e-4235.14Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A8K1FK79_PYTOL1.290e-4233.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A836CM32_9STRA3.210e-4235.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001D29C9771.380e-4035.22Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A2D4BMD0_PYTIN3.740e-4037.38Sepiapterin reductase n=2 Tax=Pythium insidiosum T... [more]
A0A6A3RA53_9STRA9.880e-4035.06Sepiapterin reductase n=3 Tax=Phytophthora TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51797contigH-elongata_contig51797:751..3000 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.7
Seed ortholog evalue3.5e-94
Seed eggNOG ortholog2880.D7FQR4
Preferred nameSPR
KEGG rclassRC00017,RC00425,RC00602,RC00823,RC02162
KEGG koko:K00072,ko:K05858,ko:K16489
KEGG ReactionR01813,R02975,R03332,R03435,R08208,R10952,R11762,R11763
KEGG Pathwayko00562,ko00790,ko01100,ko04015,ko04020,ko04022,ko04062,ko04070,ko04071,ko04072,ko04261,ko04270,ko04310,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04745,ko04750,ko04911,ko04912,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04924,ko04925,ko04926,ko04927,ko04933,ko04934,ko04961,ko04970,ko04971,ko04972,ko05010,ko05016,ko05142,ko05143,ko05146,ko05200,map00562,map00790,map01100,map04015,map04020,map04022,map04062,map04070,map04071,map04072,map04261,map04270,map04310,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04745,map04750,map04911,map04912,map04915,map04916,map04918,map04919,map04921,map04922,map04924,map04925,map04926,map04927,map04933,map04934,map04961,map04970,map04971,map04972,map05010,map05016,map05142,map05143,map05146,map05200
KEGG ModuleM00130,M00842
GOsGO:0000166,GO:0000902,GO:0000904,GO:0001505,GO:0003674,GO:0003824,GO:0004033,GO:0004757,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006558,GO:0006584,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0006809,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009108,GO:0009653,GO:0009712,GO:0009987,GO:0010033,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0018958,GO:0019222,GO:0019438,GO:0019751,GO:0019752,GO:0019889,GO:0022008,GO:0030154,GO:0030182,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032768,GO:0032989,GO:0034311,GO:0034312,GO:0034641,GO:0036094,GO:0040008,GO:0040014,GO:0042133,GO:0042136,GO:0042221,GO:0042415,GO:0042417,GO:0042428,GO:0042430,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046209,GO:0046483,GO:0046983,GO:0048037,GO:0048468,GO:0048638,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0050999,GO:0051186,GO:0051188,GO:0051239,GO:0051341,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0072593,GO:0097159,GO:0097164,GO:1901160,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1902221,GO:1903409,GO:2001057
EggNOG free text desc.sepiapterin reductase
EggNOG OGsCOG1028@1,KOG1204@2759
EC1.1.1.153,3.1.4.11
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size918
Cds size915
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51797.12456.1prot_H-elongata_contig51797.12456.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig51797 751..2997 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930847.1796532-CDS-H-elongata_contig51797:750..9881622930847.1796532-CDS-H-elongata_contig51797:750..988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51797 751..988 -
1691679595.8328645-CDS-H-elongata_contig51797:750..9881691679595.8328645-CDS-H-elongata_contig51797:750..988Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51797 751..988 -
1622930847.1949432-CDS-H-elongata_contig51797:1681..20781622930847.1949432-CDS-H-elongata_contig51797:1681..2078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51797 1682..2078 -
1691679595.8432355-CDS-H-elongata_contig51797:1681..20781691679595.8432355-CDS-H-elongata_contig51797:1681..2078Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51797 1682..2078 -
1622930847.2117102-CDS-H-elongata_contig51797:2717..29971622930847.2117102-CDS-H-elongata_contig51797:2717..2997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51797 2718..2997 -
1691679595.8513021-CDS-H-elongata_contig51797:2717..29971691679595.8513021-CDS-H-elongata_contig51797:2717..2997Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig51797 2718..2997 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930847.2274659-UTR-H-elongata_contig51797:2997..30001622930847.2274659-UTR-H-elongata_contig51797:2997..3000Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51797 2998..3000 -
1691679595.8592448-UTR-H-elongata_contig51797:2997..30001691679595.8592448-UTR-H-elongata_contig51797:2997..3000Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig51797 2998..3000 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig51797.12456.1

>prot_H-elongata_contig51797.12456.1 ID=prot_H-elongata_contig51797.12456.1|Name=mRNA_H-elongata_contig51797.12456.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=305bp
MTTGRFLMIVTGASRGFGRCVAEEFVRKVAPFNPVELVLIARSVPGLKSV
ASAIDEITMAIPDVSEVVVRQNAFDLGDLERLNARLDGIFSGLADPSRYA
RAVLVNNAGSLGHIGYANELPSLATLRSEMDFNFTSAMWLSSRFTAVFGV
RKSEALKDAPRVTSDVSETAQSEGGEGEHCSAAPAKNTPGAPNNLVVNIS
SKAAFKPIESWGGYSAGKAGREMFHRVLAMEQAKVGGLKILNYAPGPMAT
DMSLELISPAQYEKDVQNGKLVDPNISAKKCIRLVLSGKFESGAHIDLFD
EDPA*
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mRNA from alignment at H-elongata_contig51797:751..3000-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig51797.12456.1 ID=mRNA_H-elongata_contig51797.12456.1|Name=mRNA_H-elongata_contig51797.12456.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2250bp|location=Sequence derived from alignment at H-elongata_contig51797:751..3000- (Himanthalia elongata Himel1 dioecious)
GAGATGACGACCGGCCGATTCTTGATGATAGTGACCGGCGCGTCCAGGGG CTTTGGGAGGTGCGTGGCCGAGGAGTTTGTTCGAAAGGTGGCTCCCTTTA ACCCCGTCGAGCTCGTGCTCATTGCGCGAAGTGTTCCGGGCCTGAAGAGC GTGGCTAGCGCTATCGATGAAATCACCATGGCCATCCCCGACGTCTCAGA GGTGGTAGTACGCCAAAACGCCTTTGATTTGGGAGATCTGGAGCGGCTGA ATGCTCGACTGGACGGCATATTTAGCGGATTAGGTACGTATGGGAGATGT TTCCCGCATTAACCGATCTGTCGAGTCTGGAACGTCGCTACTTCCAAAAG GTAGGCCAGTACTTAGTGTCGGTATATAATTTGTACCACGTTTTCGATGG CCGAAGACCGAACGCTCTTCCCCAGGAACTGCCAGTTCACAGGGCACGCC GGGTTCCTTTTAGTCATATCTGCATGGGCCCTCTTCCTAAGTTAGCGCAA ACGCTTCGGCGGCGGCAACAACATTTTATATTATAGCGCTATTGCTTATG GGCAGAAGACATGGATTTATTTGGGTAACTTGATGTAGGAGGGCGAAGCG AACCAGCATCCCGCTCGCCACGGAAGGCCGTTTCGGACTATTATTACTCT TAAGTCCCTACCATGACTTATTGTGCAATAATCCCCTCGCTGCCTTCTTG CTACCTTCTGCACAAATATGATGGATATGGTTAGGGTGTAACATACCAGG CGGCTTTCTAACATTTCAGTATCATAGTCACCTGTCCGATCAGCCGAGGT AGACCAAGGTGTTGCTCATGGCGCTCTGCAAGTCAGTATTCGCACCTGTA ACTCACGCGGCTCACCCCGCCTTGCCTTGCCTCTGGATTCACTACCGCCC CCGTCTGAGGCGCTGAACGAAGCAGACCCTTCTCGCTACGCGCGAGCAGT GCTGGTGAATAACGCTGGTTCCCTCGGACATATCGGCTACGCCAATGAGC TTCCCTCCTTAGCAACGCTTAGGTCGGAGATGGATTTCAACTTCACGTCA GCGATGTGGCTGTCATCGCGATTTACCGCAGTCTTCGGGGTGCGCAAATC AGAGGCATTGAAGGACGCGCCCCGCGTGACGTCAGACGTGTCAGAAACAG CGCAAAGTGAAGGTGGAGAGGGGGAGCACTGCAGCGCTGCCCCGGCGAAG AACACTCCCGGCGCTCCCAACAACTTGGTGGTGAACATTTCAAGCAAAGC CGCTTTCAAGCCTATCGAGTCCTGGGGAGGTTATTCTGCGGGCAAGGCCG GGCGGGAAATGTTCCACAGGTGATCGACTAATCCCACGTCCACATTTAGC GTCTAGTTCCTGTCCAGCGGCCAAATGTATTTATCTAGATCGTCCTATGC CGCCTTTTTGTTGCTTACATTTGTTTTGGTTTCTCTCTGTGACTGAAGAC GGGGCCATTCAACATGCTATTGCTATAATAGTAATTATTAGTAGGTTACC AATCCCAGCTAGTAATAGTAATAGTGCAACGTTGTCCATCCCGTATGTGG TCGTAAGAAATCCACCCACGCCTCCCCGGCTGGCGGCTATGATATTCTAT TGCAATGCAAAGTTCAGCCCTCCTATTGTACACCTCCTCAATTATACAAT GGTTGATCTTTGCTTACAGTCTCGTTTTCACGCTTTTCCGCTAGAGGAAA AAATTATACCGTAATAATAATAATCCTGGTGTGGGATTCGAAACCATATA TTTTGCATTATTAATAGTGGCTAAAGTGGTTACAGTACCAGTAGATAAGA CTACTCCCGAAGAGTTTATTTCTTGTTCGAGTCCAACGGCAATCGCTAAT TAACCTCGTCCAGTTTTGATCGCTCTTTAGAAAATAATAAAAACAGTATA TTGCGAGTTTTGTCATAAGCTTAGGCCCCCACGGCCGAAATAATCACCAC CCAGTCCGAGCATTGATTGGCTGACGTGTTGCCTTCCATCGCAACTACCG GAACTTGTCCAGAGTACTCGCCATGGAGCAAGCTAAGGTTGGGGGCTTGA AGATCCTAAACTACGCTCCGGGTCCCATGGCCACCGACATGTCACTGGAA TTAATATCGCCAGCACAGTATGAGAAGGATGTTCAAAATGGCAAGCTAGT GGACCCCAATATTTCGGCCAAAAAGTGCATCAGGCTTGTGCTCAGCGGCA AATTCGAATCTGGGGCGCACATCGACCTTTTCGACGAAGACCCTGCGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig51797:751..3000-

>mRNA_H-elongata_contig51797.12456.1 ID=mRNA_H-elongata_contig51797.12456.1|Name=mRNA_H-elongata_contig51797.12456.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1830bp|location=Sequence derived from alignment at H-elongata_contig51797:751..3000- (Himanthalia elongata Himel1 dioecious)
ATGACGACCGGCCGATTCTTGATGATAGTGACCGGCGCGTCCAGGGGCTT
TGGGAGGTGCGTGGCCGAGGAGTTTGTTCGAAAGGTGGCTCCCTTTAACC
CCGTCGAGCTCGTGCTCATTGCGCGAAGTGTTCCGGGCCTGAAGAGCGTG
GCTAGCGCTATCGATGAAATCACCATGGCCATCCCCGACGTCTCAGAGGT
GGTAGTACGCCAAAACGCCTTTGATTTGGGAGATCTGGAGCGGCTGAATG
CTCGACTGGACGGCATATTTAGCGGATTAGATGACGACCGGCCGATTCTT
GATGATAGTGACCGGCGCGTCCAGGGGCTTTGGGAGGTGCGTGGCCGAGG
AGTTTGTTCGAAAGGTGGCTCCCTTTAACCCCGTCGAGCTCGTGCTCATT
GCGCGAAGTGTTCCGGGCCTGAAGAGCGTGGCTAGCGCTATCGATGAAAT
CACCATGGCCATCCCCGACGTCTCAGAGGTGGTAGTACGCCAAAACGCCT
TTGATTTGGGAGATCTGGAGCGGCTGAATGCTCGACTGGACGGCATATTT
AGCGGATTAGCAGACCCTTCTCGCTACGCGCGAGCAGTGCTGGTGAATAA
CGCTGGTTCCCTCGGACATATCGGCTACGCCAATGAGCTTCCCTCCTTAG
CAACGCTTAGGTCGGAGATGGATTTCAACTTCACGTCAGCGATGTGGCTG
TCATCGCGATTTACCGCAGTCTTCGGGGTGCGCAAATCAGAGGCATTGAA
GGACGCGCCCCGCGTGACGTCAGACGTGTCAGAAACAGCGCAAAGTGAAG
GTGGAGAGGGGGAGCACTGCAGCGCTGCCCCGGCGAAGAACACTCCCGGC
GCTCCCAACAACTTGGTGGTGAACATTTCAAGCAAAGCCGCTTTCAAGCC
TATCGAGTCCTGGGGAGGTTATTCTGCGGGCAAGGCCGGGCGGGAAATGT
TCCACAGCAGACCCTTCTCGCTACGCGCGAGCAGTGCTGGTGAATAACGC
TGGTTCCCTCGGACATATCGGCTACGCCAATGAGCTTCCCTCCTTAGCAA
CGCTTAGGTCGGAGATGGATTTCAACTTCACGTCAGCGATGTGGCTGTCA
TCGCGATTTACCGCAGTCTTCGGGGTGCGCAAATCAGAGGCATTGAAGGA
CGCGCCCCGCGTGACGTCAGACGTGTCAGAAACAGCGCAAAGTGAAGGTG
GAGAGGGGGAGCACTGCAGCGCTGCCCCGGCGAAGAACACTCCCGGCGCT
CCCAACAACTTGGTGGTGAACATTTCAAGCAAAGCCGCTTTCAAGCCTAT
CGAGTCCTGGGGAGGTTATTCTGCGGGCAAGGCCGGGCGGGAAATGTTCC
ACAGAGTACTCGCCATGGAGCAAGCTAAGGTTGGGGGCTTGAAGATCCTA
AACTACGCTCCGGGTCCCATGGCCACCGACATGTCACTGGAATTAATATC
GCCAGCACAGTATGAGAAGGATGTTCAAAATGGCAAGCTAGTGGACCCCA
ATATTTCGGCCAAAAAGTGCATCAGGCTTGTGCTCAGCGGCAAATTCGAA
TCTGGGGCGCACATCGACCTTTTCGACGAAGACCCTGCGTAAAGTACTCG
CCATGGAGCAAGCTAAGGTTGGGGGCTTGAAGATCCTAAACTACGCTCCG
GGTCCCATGGCCACCGACATGTCACTGGAATTAATATCGCCAGCACAGTA
TGAGAAGGATGTTCAAAATGGCAAGCTAGTGGACCCCAATATTTCGGCCA
AAAAGTGCATCAGGCTTGTGCTCAGCGGCAAATTCGAATCTGGGGCGCAC
ATCGACCTTTTCGACGAAGACCCTGCGTAA
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