mRNA_H-elongata_contig51561.12424.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A6H5KE38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE38_9PHAE) HSP 1 Score: 334 bits (856), Expect = 1.430e-103 Identity = 170/234 (72.65%), Postives = 200/234 (85.47%), Query Frame = 1
Query: 1 PKVTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDERSSDADTTGAGAEK----YLTKIRSLFPGLKVRDGKRVLMKKSHTYYQQR 690
P+VTYLTAAGNELTG+GLDGVRPL+DLKVFNAS NRVRRIPP+VF+QFRQLQALVL++NEI EVPP+W KKGLLSLNTLV+SHNK+ SLS +GLGRLT+LTKLS+S+N L ++PDLS+CSGLEELRA VPA+LSKN ALRTLDLGHNNIDDWVGLE GE+L L+QL+L+GNP+ ++ A+ G G E Y+ K+RSLFPGLKVRDGKR+LMKKSHTYY+QR
Sbjct: 89 PQVTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLSDNEISEVPPTWLKKGLLSLNTLVLSHNKLKSLSGTGLGRLTALTKLSISYNTLVELPDLSACSGLEELRAAHNIVTQVPASLSKNAALRTLDLGHNNIDDWVGLERLGESLKSLMQLSLSGNPICGAAAA-AEKRGTGEEDGEEDYVAKVRSLFPGLKVRDGKRILMKKSHTYYEQR 321
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: D7FIN7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN7_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.120e-87 Identity = 149/215 (69.30%), Postives = 180/215 (83.72%), Query Frame = 1
Query: 1 PKVTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDERSSDADTTGAGAEK----YLTKIRSLFPGLK 633
P+VTYLTAA NELTG+GLDGVRPL+DLKVFNAS NRVRRIPP+VF+QFRQLQALVL++NEI EVPP+W K+GLLSLNTLV+SHNK+ SLS +GLGRLT+LTKLS+S+N L ++PDLS+CSGLEELRA VPA+LSKN ALRTLDLGHN IDDWVGLE G++L L+QL+L+GNP+ ++ A+ +G G E Y+ K+RSLFPGLK
Sbjct: 91 PQVTYLTAASNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLSDNEISEVPPTWLKQGLLSLNTLVLSHNKLKSLSGTGLGRLTALTKLSISYNTLVELPDLSACSGLEELRAAHNIVTQVPASLSKNAALRTLDLGHNRIDDWVGLERLGKSLKSLMQLSLSGNPICGAAAA-AEKSGTGEEDGEEGYVAKVRSLFPGLK 304
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A835Z8M8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M8_9STRA) HSP 1 Score: 166 bits (421), Expect = 5.780e-40 Identity = 119/283 (42.05%), Postives = 150/283 (53.00%), Query Frame = 1
Query: 7 VTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLS-LNTLVVSHNKINSLSASGLGRLTSLTK-------------------------------------------LSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPL----------RDERSSDADTTGAGAEK-------YLTKIRSLFPGLKVRDGKRVLMKKSH 672
VTYL NELTGEGLDGVR L DL V NA+ N+++ +P +VF FR LQ LVLN+N I VP +W+KKG+ + LNTLV+SHN I SLS SGL +L LTK LS SHN LS++PDLS+C+ XXXXXXX P LS+ ALR LDLGHN + +W ++ T LVQLTL G P+ + + D A E+ Y +K++ LFP LK +DG+R L K SH
Sbjct: 69 VTYLKVDNNELTGEGLDGVRCLPDLNVLNAAHNQIKTVPAAVFGAFRGLQVLVLNDNAIAAVPRTWWKKGVAAALNTLVLSHNAIASLSDSGLDKLAMLTKRDAAAARRGAAMPSAAAAIITERSERCFYERCCGLDKFAMLTELSASHNQLSEMPDLSACAXXXXXXXXXXXXXXXPVWLSELAALRLLDLGHNAVSEWSEVKKL-TTAPALVQLTLRGCPISGVTSVPGEQQQHAAGDGAAPAAAVEEDAERVAEYESKMKKLFPKLKTQDGQRTLPKISH 350
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A7S1XKR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKR6_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.190e-33 Identity = 93/262 (35.50%), Postives = 136/262 (51.91%), Query Frame = 1
Query: 1 PKVTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKIN-SLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSG-LEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPL------------------------RDERSSDADTTGAGAEKYLTKIRSLFPGLKVRDGKRVLMKKSHTYYQQRAEGADA 708
P +++L AA NELTGEGL G+ L L NA N+++ IPP F++ + L+ALVLN+NEI F K L L LV+S N++ L+ L SL K++++ N + ++PDLS C+ L ELRA VP TL + L+ ++LG N I W L +L + L+L GNP+ +E S+ D A Y+ K+R LFP L V DG+RV++K++H + + E A A
Sbjct: 8 PLLSWLQAAENELTGEGLAGLHGLEALVTLNAGRNKIKAIPPGTFTRCKSLKALVLNDNEISATD---FLKKLKGLTVLVLSRNQLGPQLNPRHFAGLRSLMKINLAGNAIEELPDLSPCAETLVELRAANNALRGVPQTLRRCKKLKVVELGSNRISSWRALAPL-TSLERITHLSLKGNPICTWAAEAPEAPAAAPEDGSGEEPDTEEEESEDDKANKPATNYVDKVRELFPKLVVMDGQRVMLKRTHGFKKPEGENAGA 265
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A2D4BR18_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR18_PYTIN) HSP 1 Score: 140 bits (353), Expect = 4.080e-32 Identity = 97/249 (38.96%), Postives = 132/249 (53.01%), Query Frame = 1
Query: 7 VTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLL---SLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDERSSDADTT------GAGAE----------------KYLTKIRSLFPGLKVRDGKRVLMKKSHTY 678
+T L N+L GEGL +R L+ L N + N V RIP V QL+ALVLNNN I + W K + LN+L+VSHN+I L+ + RL +LTK+S++HN+L ++PDLSS X VP +L++ L+ L+LGHN IDDW G+E + L L Q++L GNP+ + TT A AE +Y K++ LFP L +RDG RVL KK H Y
Sbjct: 81 LTMLKLMENKLNGEGLAELRHLKKLVTLNIADNVVLRIPTDVLRHMSQLKALVLNNNSITTL--EWIPKLSVRGNQLNSLIVSHNRIPELAPRIVDRLPNLTKISMTHNLLEELPDLSSLKNXXXXXFSXNKLKTVPKSLAQLPKLKILELGHNEIDDWEGIEALSK-LDSLKQISLTGNPIYGVPLDASKTTETELKEDASAEDKAKMKEXXRLEAKHKQYNFKMKRLFPNLVIRDGHRVLNKKVHGY 326
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A396ZVE2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZVE2_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.050e-21 Identity = 84/268 (31.34%), Postives = 128/268 (47.76%), Query Frame = 1
Query: 7 VTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKINSLSASGLGRLTSLTKLSV----------------------SHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPL--------------RDERSSDADTTGAG-AEK---------YLTKIRSLFPGLKVRDGKRVLMKKSH 672
+T L N L G+ + + L + S N++ R+P + L+ALVL N + + W L L +L+VSHN+I +SA +G+L LTKL + SHN L+++PDLS+ L ELRA +PA+++ NV L+ +D+ HN+ID + GL+ +L L QL L GNP+ E+ DA + AE+ Y K++ LFP L VRDG+R+ K++H
Sbjct: 83 LTQLKITSNVLVDAGIVDLSFCKQLVTLDLSDNKLARLPGASLRHCTGLRALVLTKNAMTSL--EWVPS-LPGLTSLIVSHNRITEISAKSIGKLKGLTKLQLYCTPPSILSMSLNQYGHYNYRSSHNKLTELPDLSALEQLTELRASNNQLTALPASINHNVNLKIVDVCHNHIDTFDGLD-QWTSLAQLKQLNLRGNPICGQNSTIPMELVDSAKEKEEDATVSQVDLAERKALDKKNKLYNFKMKRLFPALIVRDGQRIQDKRTH 346
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A067C9B1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9B1_SAPPC) HSP 1 Score: 106 bits (264), Expect = 7.000e-21 Identity = 77/232 (33.19%), Postives = 108/232 (46.55%), Query Frame = 1
Query: 7 VTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDERSSDADTTGAGAEK--------YLTKIRSLFPGLKVRDGKRVLMKKSHTY 678
+T L N LT G+ + + L + LVL N I + W + L +L+VS N+I +S LG++ +L K+S+SHN L +PD++ + L ELR +PATL+ N L+ LD HN ID W G E G +L L QL L GNPL + A T +K Y K++ LF L +RDG RVL K++H Y
Sbjct: 70 LTQLKITSNLLTDSGVGDLSHCKALVTLDXXXXXXXXXXXXXXXXXXXXXXLVLTKNSITSL--DWLPS-MPQLTSLIVSQNRIGDISEKALGKVKNLVKISISHNKLKALPDMAVLADLSELRISNNQLTALPATLANNRNLKILDACHNAIDTWDGFENLG-SLKQLKQLNLKGNPLCGVAAEAATTEDEAGKKAADKKNKLYNFKMKRLFETLIIRDGHRVLEKRTHGY 297
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A1V9ZQN7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQN7_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.040e-20 Identity = 82/236 (34.75%), Postives = 113/236 (47.88%), Query Frame = 1
Query: 7 VTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDERSSDADTTGAGAEK------------YLTKIRSLFPGLKVRDGKRVLMKKSHTY 678
+T L N LT G+ V + L + S N++ R+P + L+ALVL NN I + W + L +L+VSHN+I+ +S LG++ +PDL+ L XXXXX +P L+KN L+ +D HN +D W GLE +L L QL L GNPL + T AEK Y K++ LF GL VRDG RVL K++H Y
Sbjct: 68 LTQLKITSNLLTDSGVADVSFCKQLITLDLSDNKLSRLPGASLRHCTHLKALVLTNNAITTL--EWLPS-MAQLTSLIVSHNRISEISEKALGKVKGXXXXXXXXXXXXXLPDLAVLENLSXXXXXXXXXTALPENLAKNRNLKIIDACHNAVDTWDGLENLS-SLKNLKQLNLKGNPLCGQPLDPKSTIEDDAEKKEKKALDKKNKLYNFKMKRLFQGLIVRDGNRVLDKRTHGY 299
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: T0QV79_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QV79_SAPDV) HSP 1 Score: 101 bits (252), Expect = 2.560e-19 Identity = 81/233 (34.76%), Postives = 115/233 (49.36%), Query Frame = 1
Query: 7 VTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGEVPPSWFKKGLLSLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDERSSDADTTGAGAEK---------YLTKIRSLFPGLKVRDGKRVLMKKSHTY 678
+T L N LT G+ + + L +ALVL N I + W + L +L+VS N+I +S LG++ +L K+S+SHN L +PD+++ + XXXX +PATL+ N L+ LD HN ID W GLE G +L L QL L GNPL +++A TT AEK Y K++ +F L +RDG RVL K++H Y
Sbjct: 88 LTQLKITSNLLTDSGVADLSYCKALVTLXXXXXXXXXXXXXXXXXXXXXKALVLTKNAITSL--DWLPS-MPQLTSLIVSQNRIGEISEKALGKVKNLVKISISHNKLKALPDMAALADXXXXXXXXXXLTALPATLANNRNLKILDACHNAIDTWDGLENLG-SLKQLKQLNLKGNPLCGV-AAEAATTEDEAEKKAADKKNKLYNFKMKRIFEALIIRDGHRVLEKRTHGY 315
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Match: A0A662XYI4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYI4_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.790e-19 Identity = 92/296 (31.08%), Postives = 125/296 (42.23%), Query Frame = 1
Query: 1 PKVTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQLQALVLNNNEIGE--------VPPSWFKKG------------------------LLSLNTLVVSHNKINSLSASGLGRLTSLTKLSVSHNMLSDVPDLSSCSGLEELRAXXXXXXXVPATLSKNVALRTLDLGHNNIDDWVGLELAGETLTVLVQLTLAGNPLRDER------SSDADTTG--------------------------------AGAEKYLTKIRSLFPGLKVRDGKRVLMKKSHTY 678
P+VT L N+L GEGL ++ L+ L + NA+ N+V RIP V R L+ALVLNNN I V SW K + LN+L+VSHN+I + L L +LTK+S++H + LS + +E L+ L+L HN IDDW GLE A +L L QL + GNPL ++ S D D A ++Y K++ LFP L VRD +RVL K+ H Y
Sbjct: 80 PRVTMLKLTDNKLNGEGLAEIQHLKKLVILNAAENQVTRIPYEVMRNMRSLKALVLNNNSITTLDWMPKLPVCSSWLKNARNGSRSLCCRSKCVVNSFVCVPCNVQELNSLIVSHNRIAQIPQRILDWLPNLTKISIAHLCVL----LSILAAVENLKV--------------------LELSHNQIDDWAGLE-ALSSLENLRQLNMTGNPLVGQKLEVVKKSGDDDXXXXXXXXXXXDGESTKIELSAEEKQKLKESKRLDAKHKQYNFKMKRLFPNLVVRDAQRVLDKRVHGY 350 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51561.12424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig51561.12424.1 >prot_H-elongata_contig51561.12424.1 ID=prot_H-elongata_contig51561.12424.1|Name=mRNA_H-elongata_contig51561.12424.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=551bp PKVTYLTAAGNELTGEGLDGVRPLRDLKVFNASSNRVRRIPPSVFSQFRQback to top mRNA from alignment at H-elongata_contig51561:274..3250+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig51561.12424.1 ID=mRNA_H-elongata_contig51561.12424.1|Name=mRNA_H-elongata_contig51561.12424.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2977bp|location=Sequence derived from alignment at H-elongata_contig51561:274..3250+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig51561:274..3250+ >mRNA_H-elongata_contig51561.12424.1 ID=mRNA_H-elongata_contig51561.12424.1|Name=mRNA_H-elongata_contig51561.12424.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3306bp|location=Sequence derived from alignment at H-elongata_contig51561:274..3250+ (Himanthalia elongata Himel1 dioecious)back to top |