mRNA_H-elongata_contig50797.12334.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50797.12334.1
Unique NamemRNA_H-elongata_contig50797.12334.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: D8LR30_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR30_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 8.230e-61
Identity = 91/141 (64.54%), Postives = 112/141 (79.43%), Query Frame = 1
Query:  244 MEEREDLADLIMSINQTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAIDWEGTWNLGK 666
            ME+RED+ADLI+SI+ TD+N  DT+TG +PLH  VLLDL SSA+KL +RG+N+NA DKVGMTPLMLGCRLGH ++V+ML+  F A++D  DK GWTCLFYATY NE NI+ +LL  GAD DH+DKRGM AIDW      G+
Sbjct:    1 MEQREDIADLIISIDDTDINAPDTITGLSPLHKTVLLDLGSSAQKLAFRGANINATDKVGMTPLMLGCRLGHEAIVDMLVDVFGAEIDPADKAGWTCLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDWGEHMRFGE 141          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A218UBT2_9PASE (NF-kappa-B inhibitor beta n=20 Tax=Passeriformes TaxID=9126 RepID=A0A218UBT2_9PASE)

HSP 1 Score: 77.8 bits (190), Expect = 2.900e-13
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  211 EEGRTALALALMEEREDLADLIMSINQT----DVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKD-------FRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHED 615
            E+G TAL LA++ E E+  + I+   +     D+ N     G + LH AV+L L+ + R+L   G+     ++ G TPL L CR GH +    L+ D        RA LD V+  G+T L  A  R ++ +++ LLR+GADPD  +
Sbjct:   65 EDGDTALHLAVIHEHEEFLESILRHTERSPYLDLQND---LGQSALHIAVVLGLAGAVRRLRAAGAGAALRERGGHTPLHLACREGHPACARALLGDPGKDEEERRAQLDSVNYDGYTPLHIAVLRRDLELVQLLLRAGADPDQPE 207          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A674GWS1_TAEGU (Uncharacterized protein n=3 Tax=Taeniopygia guttata TaxID=59729 RepID=A0A674GWS1_TAEGU)

HSP 1 Score: 77.0 bits (188), Expect = 6.930e-13
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  211 EEGRTALALALMEEREDLADLIMSINQT----DVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKD-------FRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHED 615
            E+G TAL LA++ E E+  + I+   +     D+ N     G + LH AV+L L+ + R+L   G+     ++ G TPL L CR GH +    L+ D        RA L+ V+  G+T L  A  R ++++++ LLR+GADPD  +
Sbjct:   88 EDGDTALHLAVIHEHEEFLESILRHTERSPYLDLQND---LGQSALHIAVVLGLAGAVRRLRAAGAGAAVRERGGHTPLHLACREGHPACARALLGDPGKDEEERRAQLESVNYDGYTPLHIAVLRRDLDLVQLLLRAGADPDQPE 230          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A8B7Z9R3_ACAPL (E3 ubiquitin-protein ligase MIB2-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z9R3_ACAPL)

HSP 1 Score: 72.4 bits (176), Expect = 3.990e-11
Identity = 51/160 (31.87%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  115 LHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIK-DFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRS 591
            L  A   GN   V+  L+  +H  P+ +   N++ +TAL +A  E   D+   ++ +    + + D   G T +  AVL + + + ++L+  GSNVNA++  G+TPL L    GH++ VE+L+K + + D++  DK G T LF+A  +N   II +L+ +
Sbjct:   40 LFQAAASGNSSSVREILL--IH--PEAVKLSNKQSQTALQVASHEGHTDVVSTLV-LGGAPLEHPDD-DGDTAIAFAVLGNKADTVKRLLLAGSNVNASNNKGLTPLHLAAAKGHQTCVEVLLKYEQKCDVNCQDKDGNTPLFHAVVKNNKQIIHWLVNN 193          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: F0Y6C0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6C0_AURAN)

HSP 1 Score: 68.2 bits (165), Expect = 7.470e-11
Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  199 NDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTV-------TGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIK 486
            N +++ GRT L+LA+ EERED+ DL++S+ Q D + ++ +       TGA+P+ +AVL DL  S  KL    ++ N  +K GMT +ML C  G   ++EML++
Sbjct:    3 NKYDKHGRTPLSLAVKEEREDIVDLLLSL-QADPDMSEDLEHHPARLTGASPVMHAVLADLPGSILKLQSSHADFNLKNKHGMTAVMLACLSGDADLLEMLLE 104          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI000C718CFA (tankyrase-1-like n=2 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C718CFA)

HSP 1 Score: 71.2 bits (173), Expect = 1.080e-10
Identity = 63/187 (33.69%), Postives = 86/187 (45.99%), Query Frame = 1
Query:   97 GWAHVDLHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVN--NTDTVT--GATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDFRAD---LDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAI 636
            G     LH     G  E++   LMR     P+  N    EG TAL       R+DL  + + +N+      N D V   G TPL  A+      SA  L+ +G+  NA D++G+T L L CR  + S     I D  A    ++  D  G T L YA Y  + ++IE LLR GADP+  D  G  A+
Sbjct:   25 GKGQTPLHLVAQWGEKEIIHFLLMRGAD--PQLTN---AEGETALHDLCKRSRDDLVKMFLKVNKQFRKSINIDAVDDRGRTPLLVALNHRDKKSALLLLKKGAKPNAIDEMGLTALHLMCRRNYDSKSIEEILDAMAGYCPVNARDLKGRTALHYALYHGDEDVIELLLRRGADPNTPDNEGTTAM 206          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI000C71C85D (ankyrin-3-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71C85D)

HSP 1 Score: 67.4 bits (163), Expect = 2.580e-9
Identity = 62/204 (30.39%), Postives = 89/204 (43.63%), Query Frame = 1
Query:  115 LHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALA---LMEEREDLADLIMSIN-------QTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGH---------------RSMVEMLI-----KDFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAI 636
            LH  +  G+ E V++ L           N  NE+G T L +    L E+  DL DL   IN       Q D  N +   G + LH AV+     +   L+ RG+  N A+  G+TPL+L C++ H                S+ EM       K     +++ D  G T L  A  R + N++E LLR GADP+  DK G   +
Sbjct:   21 LHSTLDSGDKEKVESLLRNGADP-----NITNEQGLTPLHVICNNLGEDDVDLMDLFFRINEELNRPVQLDAQNKE---GNSALHLAVIRGNKKAIELLLRRGARSNLANAEGLTPLLLICKIYHDADDXXXXXXXXXXNESLAEMFFRINEEKHQLVQVNVQDNQGNTPLILAMDRGDENLMELLLRRGADPNTTDKEGSSPL 216          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI000C71AFCA (ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71AFCA)

HSP 1 Score: 67.0 bits (162), Expect = 3.880e-9
Identity = 58/193 (30.05%), Postives = 88/193 (45.60%), Query Frame = 1
Query:  100 WAHVDLHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEERE-DLADLIMSINQTDVN----NTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDF---------RADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAI 636
            W +  L  AV +GN   V+  L R         N  N EG T + +    + + +LA++I  I+    +    +    TG TPLH A        A  L+ +G+N N  +K G TPL   C   ++ +   L+K F            LD+ DK G T L  A  R  + ++E LLR+GADPD  ++ G+  +
Sbjct:  418 WGNSPLLLAVQNGNHAAVEFLLRRGASP-----NLANAEGLTPMHIICEADCDHELAEMIFEISDIKYHPIHVDAQDETGNTPLHVAAYFRQRLVADLLLRKGANPNLVNKAGCTPLHFICN--NKDIDVDLLKTFIEIKNEIQQSVQLDIGDKIGDTPLHLAVKRENLEVVELLLRNGADPDFANEDGLTPL 603          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A6H5IHA3_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IHA3_9HYME)

HSP 1 Score: 65.9 bits (159), Expect = 8.080e-9
Identity = 54/188 (28.72%), Postives = 87/188 (46.28%), Query Frame = 1
Query:  154 KTTLMRYVHKYPKRIN-DHNEEGRTALALALMEEREDLADLIMSINQTD---VNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDFRAD------LDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRG---------MKAIDWEGTWNL 660
            + T++R + K   R + ++   G T   +A      D+A   + + Q     V  +D   G  PL  AVL  L    + L+  G++ N + K G+T L + C  G   + EML  +F  D      +D  D+ G + L++A YRN  ++ +FLLR GADP+    +G         M + + E  W L
Sbjct:  121 RNTVLRELFKIYDRFDVNYTGNGVTHFHVACQLHETDIAKKFLELGQDPNCCVEQSDRRLGDPPLSLAVLRGLKEMVKLLLRAGADPNWSSKHGVTCLHVICMEGDGVLAEMLF-EFSKDEYRPIQIDARDQLGRSVLYWALYRNNKSVAQFLLRKGADPNLASNKGLTPLHATCLMMSYEEEDLWKL 307          
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI001EEB75A6 (alpha-latrocrustotoxin-Lt1a-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB75A6)

HSP 1 Score: 65.1 bits (157), Expect = 1.400e-8
Identity = 52/182 (28.57%), Postives = 93/182 (51.10%), Query Frame = 1
Query:  115 LHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCR-----LGHRSMVEMLIKDFRADLDLVDKTGWTCLFYAT---YRNEINIIEFLLRSGADPDHEDKRGMKAI 636
            L   +  G+ +LV  T+   + KY   I+       T L LA  E+  +   LI+   Q D+N+     G T LH+A+   + ++AR L+ +G++ NAA + G TPL L  +     + +  +++++++  + +++ VD  G T L YA        IN+   L++ GADP   DK+G+  +
Sbjct:  257 LFQLIKMGSTDLVNITVA--IGKYDINID-------TPLHLAAHEKEIETISLILENEQVDINSRGNY-GQTALHHAIRFRMPNTARYLLKKGADPNAATENGATPLYLAAKTYYHYMTNTELIDIILETGKCNINGVDNYGRTPLHYAIEGYIPGTINVRR-LIKMGADPGIADKKGVTPL 427          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR30_ECTSI8.230e-6164.54Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A218UBT2_9PASE2.900e-1334.93NF-kappa-B inhibitor beta n=20 Tax=Passeriformes T... [more]
A0A674GWS1_TAEGU6.930e-1334.25Uncharacterized protein n=3 Tax=Taeniopygia guttat... [more]
A0A8B7Z9R3_ACAPL3.990e-1131.88E3 ubiquitin-protein ligase MIB2-like n=1 Tax=Acan... [more]
F0Y6C0_AURAN7.470e-1139.81Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
UPI000C718CFA1.080e-1033.69tankyrase-1-like n=2 Tax=Trichogramma pretiosum Ta... [more]
UPI000C71C85D2.580e-930.39ankyrin-3-like n=1 Tax=Trichogramma pretiosum TaxI... [more]
UPI000C71AFCA3.880e-930.05ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxI... [more]
A0A6H5IHA3_9HYME8.080e-928.72Uncharacterized protein n=1 Tax=Trichogramma brass... [more]
UPI001EEB75A61.400e-828.57alpha-latrocrustotoxin-Lt1a-like n=1 Tax=Daphnia p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50797contigH-elongata_contig50797:224..2468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score201.1
Seed ortholog evalue5.4e-49
Seed eggNOG ortholog2880.D8LR30
KEGG koko:K21415
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin repeat
Ec32 orthologEc-06_004570.1
Exons6
Model size707
Cds size645
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50797.12334.1prot_H-elongata_contig50797.12334.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50797 254..2436 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930833.7137702-UTR-H-elongata_contig50797:223..2531622930833.7137702-UTR-H-elongata_contig50797:223..253Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50797 224..253 +
1691679590.226242-UTR-H-elongata_contig50797:223..2531691679590.226242-UTR-H-elongata_contig50797:223..253Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50797 224..253 +
1622930833.877922-UTR-H-elongata_contig50797:2436..24681622930833.877922-UTR-H-elongata_contig50797:2436..2468Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50797 2437..2468 +
1691679590.3039641-UTR-H-elongata_contig50797:2436..24681691679590.3039641-UTR-H-elongata_contig50797:2436..2468Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig50797 2437..2468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930833.7348356-CDS-H-elongata_contig50797:253..3181622930833.7348356-CDS-H-elongata_contig50797:253..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 254..318 +
1691679590.2423747-CDS-H-elongata_contig50797:253..3181691679590.2423747-CDS-H-elongata_contig50797:253..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 254..318 +
1622930833.7870717-CDS-H-elongata_contig50797:550..6651622930833.7870717-CDS-H-elongata_contig50797:550..665Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 551..665 +
1691679590.2518625-CDS-H-elongata_contig50797:550..6651691679590.2518625-CDS-H-elongata_contig50797:550..665Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 551..665 +
1622930833.8075805-CDS-H-elongata_contig50797:1169..12771622930833.8075805-CDS-H-elongata_contig50797:1169..1277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 1170..1277 +
1691679590.2662895-CDS-H-elongata_contig50797:1169..12771691679590.2662895-CDS-H-elongata_contig50797:1169..1277Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 1170..1277 +
1622930833.822958-CDS-H-elongata_contig50797:1469..15681622930833.822958-CDS-H-elongata_contig50797:1469..1568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 1470..1568 +
1691679590.2751687-CDS-H-elongata_contig50797:1469..15681691679590.2751687-CDS-H-elongata_contig50797:1469..1568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 1470..1568 +
1622930833.8398018-CDS-H-elongata_contig50797:1859..19611622930833.8398018-CDS-H-elongata_contig50797:1859..1961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 1860..1961 +
1691679590.2836702-CDS-H-elongata_contig50797:1859..19611691679590.2836702-CDS-H-elongata_contig50797:1859..1961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 1860..1961 +
1622930833.860898-CDS-H-elongata_contig50797:2280..24361622930833.860898-CDS-H-elongata_contig50797:2280..2436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 2281..2436 +
1691679590.2924721-CDS-H-elongata_contig50797:2280..24361691679590.2924721-CDS-H-elongata_contig50797:2280..2436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50797 2281..2436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50797.12334.1

>prot_H-elongata_contig50797.12334.1 ID=prot_H-elongata_contig50797.12334.1|Name=mRNA_H-elongata_contig50797.12334.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp
MIEMKYTETVRMWPFYQLRRFLGWAHVDLHDAVLDGNIELVKTTLMRYVH
KYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTVTGAT
PLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEML
IKDFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMK
AIDWEGTWNLGKRV*
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mRNA from alignment at H-elongata_contig50797:224..2468+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50797.12334.1 ID=mRNA_H-elongata_contig50797.12334.1|Name=mRNA_H-elongata_contig50797.12334.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2245bp|location=Sequence derived from alignment at H-elongata_contig50797:224..2468+ (Himanthalia elongata Himel1 dioecious)
CAGGTGCTTAAAGACTACCACACAAAACCAATGATCGAGATGAAATATAC CGAGACCGTCCGGATGTGGCCGTTCTACCAACTTCGACGATTTCTGTAAG TTTGCTCTGTTTTGCCAAGGTGGCTTTCGAGAGAAATACTAGCTACTTAG AACTTTTATAATTGTGTTTAGATATTAGGTTTACTTCAGCACGATCGCGG CAACCAGAGACCCATCACTCTATGTTTCCCAGAGTAAAAGCCCTTAGCGA CTGACTTGAGGTCTTTCCACATCATTGCGAAGTGCGACATTTCGCCCAAT TCGAAATTGATAATTTGCTGTATACAGTGGATGGGCACACGTTGACCTTC ACGATGCAGTGCTCGACGGCAACATTGAACTTGTCAAGACAACCCTTATG CGTTACGTTCACAAGTACCCCAAGAGAATCAACGATCACAATGTGAGCAA ATAAATGTTTAATATGTACTCTACTGGTATCAGGTAGCAGCTAATACTAA AGCTTTATTTCTTCGATTACACACTTATACTCTTGTCTTTGGTGACTGCT TTCTTTGGCTAAGACTTTATGTGATCGTGGCCACGATCGTTCGCAGCTAA GAATTTTATGGGCAAGGCGCGTTTATTCTTATGAAACAATAGTTGGTCCC CTGGACTACACCTCTCATGGTGCCAAGAGGGTGTAGATGTTCGGAGGGTT TGAATAAGTTCATATGTGCTTAAAAAAGCATGAGGATAAACATTTCCGGT ACCGCTGCCATCGACCTCACAAAAAAATAATGTTGATAATAACAGCTAAG AAGGCCGTGAAATGTTCAGCCTAACTGGGTGGAATTAAATATTAATATTT TGAGGGATCGACGTTTTGACAATTGTTCACGGCAATTGTGCCGATACGTT ACCCTCTCAACACCAAATAAACCCCTTCGTGATTACGTGCTTTCAGGAAG AAGGCAGGACTGCTCTCGCACTTGCACTGATGGAAGAGCGGGAGGATCTT GCTGACCTAATTATGTCCATCAATCAGACAGACGTTAACAATACCGACAC TGTTGTGAGTGTCAAATGTGTTGCTTTCTCCTAACATCAGTCATATCTTG CGGTCTAGAGTCGAGCCCACAAATTGAGTAAACGTCGTCACGTTCGTCTG TGGTTCTCGTGGTGGTGGCAAGCTGACAGCACGCACTAAACACAAAAGAA CATGCTTCCTCTCATTCTTGAACTTCCTTGATTTGCCTCCGTGCAGACGG GCGCAACACCGCTGCACAATGCTGTGCTCCTTGATCTCTCATCGTCAGCC AGAAAGCTGGTTTACAGAGGGTCAAACGTAAATGCCGCCGATAAGGTAAC TTCACCCATGCTTGTGCGTTTCGTCTTCGGAGACCGTTTACAAAGGTTTA TTTTCACAGTGAATGAATGAATGCGTTTCCGGTTACGCTCTATTCTACGC ACAACAAGTTGATGGCGTACAATATCTGGACACGAAGCCCGCATAAAGTA CTAGGTTGCTTTTGCGATGGAAGGGAGAACGGATCTTGGCCGCACGTTGT ACGAATGAAGAAGATTTATCTGCAATATTTTCATTCATCTTGTGATTTTC GCGGAATTGACTGCCTACTTAATAATCAAATGCCAGGTTGGCATGACTCC ACTTATGCTTGGGTGCAGGTTGGGCCATAGGTCGATGGTGGAGATGCTCA TTAAAGATTTTCGTGCAGATCTAGATCTAGTAGACAAGGTATGGCAGAAA AACCTTCCGCCGCGCAAGCTCATATTTATGTTTAAGCATTTTTATTATTC TCGCCCTCGCAGTTAAGCTCCCGTTATCGCTAAGAAGACGCGGATGTTCG GGAGGGTTAGAATGAGTTCATTGTTTTTTTAAGAAGAAAAAATATATATT GTTGAAAAGACCGTTCATTGGGCCTGCAGCTCCACCATCTTTGTTGTTGT AATTCCTCTTTGATTCATCATATATATATACTATCGTAATTCTTTTTAAT CTGTCGGTCTTACCCTCTCTTCTGTGTTTTATGTATTTCTTCTGACGGGT TACCCAGACCGGTTGGACATGCCTATTTTATGCCACGTACCGTAACGAGA TCAATATAATCGAGTTTCTGCTCAGGAGCGGAGCGGACCCAGACCACGAA GACAAGCGGGGAATGAAGGCGATCGACTGGGAGGGTACATGGAATTTGGG GAAGCGCGTATGATGTTTGCACGATTTCAACCAATGCTTTCACCC
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Coding sequence (CDS) from alignment at H-elongata_contig50797:224..2468+

>mRNA_H-elongata_contig50797.12334.1 ID=mRNA_H-elongata_contig50797.12334.1|Name=mRNA_H-elongata_contig50797.12334.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1290bp|location=Sequence derived from alignment at H-elongata_contig50797:224..2468+ (Himanthalia elongata Himel1 dioecious)
ATGATCGAGATGAAATATACCGAGACCGTCCGGATGTGGCCGTTCTACCA
ACTTCGACGATTTCTATGATCGAGATGAAATATACCGAGACCGTCCGGAT
GTGGCCGTTCTACCAACTTCGACGATTTCTTGGATGGGCACACGTTGACC
TTCACGATGCAGTGCTCGACGGCAACATTGAACTTGTCAAGACAACCCTT
ATGCGTTACGTTCACAAGTACCCCAAGAGAATCAACGATCACAATTGGAT
GGGCACACGTTGACCTTCACGATGCAGTGCTCGACGGCAACATTGAACTT
GTCAAGACAACCCTTATGCGTTACGTTCACAAGTACCCCAAGAGAATCAA
CGATCACAATGAAGAAGGCAGGACTGCTCTCGCACTTGCACTGATGGAAG
AGCGGGAGGATCTTGCTGACCTAATTATGTCCATCAATCAGACAGACGTT
AACAATACCGACACTGTTGAAGAAGGCAGGACTGCTCTCGCACTTGCACT
GATGGAAGAGCGGGAGGATCTTGCTGACCTAATTATGTCCATCAATCAGA
CAGACGTTAACAATACCGACACTGTTACGGGCGCAACACCGCTGCACAAT
GCTGTGCTCCTTGATCTCTCATCGTCAGCCAGAAAGCTGGTTTACAGAGG
GTCAAACGTAAATGCCGCCGATAAGACGGGCGCAACACCGCTGCACAATG
CTGTGCTCCTTGATCTCTCATCGTCAGCCAGAAAGCTGGTTTACAGAGGG
TCAAACGTAAATGCCGCCGATAAGGTTGGCATGACTCCACTTATGCTTGG
GTGCAGGTTGGGCCATAGGTCGATGGTGGAGATGCTCATTAAAGATTTTC
GTGCAGATCTAGATCTAGTAGACAAGGTTGGCATGACTCCACTTATGCTT
GGGTGCAGGTTGGGCCATAGGTCGATGGTGGAGATGCTCATTAAAGATTT
TCGTGCAGATCTAGATCTAGTAGACAAGACCGGTTGGACATGCCTATTTT
ATGCCACGTACCGTAACGAGATCAATATAATCGAGTTTCTGCTCAGGAGC
GGAGCGGACCCAGACCACGAAGACAAGCGGGGAATGAAGGCGATCGACTG
GGAGGGTACATGGAATTTGGGGAAGCGCGTATGAACCGGTTGGACATGCC
TATTTTATGCCACGTACCGTAACGAGATCAATATAATCGAGTTTCTGCTC
AGGAGCGGAGCGGACCCAGACCACGAAGACAAGCGGGGAATGAAGGCGAT
CGACTGGGAGGGTACATGGAATTTGGGGAAGCGCGTATGA
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