mRNA_H-elongata_contig50797.12334.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: D8LR30_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR30_ECTSI) HSP 1 Score: 197 bits (500), Expect = 8.230e-61 Identity = 91/141 (64.54%), Postives = 112/141 (79.43%), Query Frame = 1
Query: 244 MEEREDLADLIMSINQTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAIDWEGTWNLGK 666
ME+RED+ADLI+SI+ TD+N DT+TG +PLH VLLDL SSA+KL +RG+N+NA DKVGMTPLMLGCRLGH ++V+ML+ F A++D DK GWTCLFYATY NE NI+ +LL GAD DH+DKRGM AIDW G+
Sbjct: 1 MEQREDIADLIISIDDTDINAPDTITGLSPLHKTVLLDLGSSAQKLAFRGANINATDKVGMTPLMLGCRLGHEAIVDMLVDVFGAEIDPADKAGWTCLFYATYHNESNIVHYLLMHGADTDHKDKRGMTAIDWGEHMRFGE 141
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A218UBT2_9PASE (NF-kappa-B inhibitor beta n=20 Tax=Passeriformes TaxID=9126 RepID=A0A218UBT2_9PASE) HSP 1 Score: 77.8 bits (190), Expect = 2.900e-13 Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 211 EEGRTALALALMEEREDLADLIMSINQT----DVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKD-------FRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHED 615
E+G TAL LA++ E E+ + I+ + D+ N G + LH AV+L L+ + R+L G+ ++ G TPL L CR GH + L+ D RA LD V+ G+T L A R ++ +++ LLR+GADPD +
Sbjct: 65 EDGDTALHLAVIHEHEEFLESILRHTERSPYLDLQND---LGQSALHIAVVLGLAGAVRRLRAAGAGAALRERGGHTPLHLACREGHPACARALLGDPGKDEEERRAQLDSVNYDGYTPLHIAVLRRDLELVQLLLRAGADPDQPE 207
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A674GWS1_TAEGU (Uncharacterized protein n=3 Tax=Taeniopygia guttata TaxID=59729 RepID=A0A674GWS1_TAEGU) HSP 1 Score: 77.0 bits (188), Expect = 6.930e-13 Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 1
Query: 211 EEGRTALALALMEEREDLADLIMSINQT----DVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKD-------FRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHED 615
E+G TAL LA++ E E+ + I+ + D+ N G + LH AV+L L+ + R+L G+ ++ G TPL L CR GH + L+ D RA L+ V+ G+T L A R ++++++ LLR+GADPD +
Sbjct: 88 EDGDTALHLAVIHEHEEFLESILRHTERSPYLDLQND---LGQSALHIAVVLGLAGAVRRLRAAGAGAAVRERGGHTPLHLACREGHPACARALLGDPGKDEEERRAQLESVNYDGYTPLHIAVLRRDLDLVQLLLRAGADPDQPE 230
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A8B7Z9R3_ACAPL (E3 ubiquitin-protein ligase MIB2-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z9R3_ACAPL) HSP 1 Score: 72.4 bits (176), Expect = 3.990e-11 Identity = 51/160 (31.87%), Postives = 89/160 (55.62%), Query Frame = 1
Query: 115 LHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIK-DFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRS 591
L A GN V+ L+ +H P+ + N++ +TAL +A E D+ ++ + + + D G T + AVL + + + ++L+ GSNVNA++ G+TPL L GH++ VE+L+K + + D++ DK G T LF+A +N II +L+ +
Sbjct: 40 LFQAAASGNSSSVREILL--IH--PEAVKLSNKQSQTALQVASHEGHTDVVSTLV-LGGAPLEHPDD-DGDTAIAFAVLGNKADTVKRLLLAGSNVNASNNKGLTPLHLAAAKGHQTCVEVLLKYEQKCDVNCQDKDGNTPLFHAVVKNNKQIIHWLVNN 193
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: F0Y6C0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6C0_AURAN) HSP 1 Score: 68.2 bits (165), Expect = 7.470e-11 Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 199 NDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTV-------TGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIK 486
N +++ GRT L+LA+ EERED+ DL++S+ Q D + ++ + TGA+P+ +AVL DL S KL ++ N +K GMT +ML C G ++EML++
Sbjct: 3 NKYDKHGRTPLSLAVKEEREDIVDLLLSL-QADPDMSEDLEHHPARLTGASPVMHAVLADLPGSILKLQSSHADFNLKNKHGMTAVMLACLSGDADLLEMLLE 104
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI000C718CFA (tankyrase-1-like n=2 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C718CFA) HSP 1 Score: 71.2 bits (173), Expect = 1.080e-10 Identity = 63/187 (33.69%), Postives = 86/187 (45.99%), Query Frame = 1
Query: 97 GWAHVDLHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVN--NTDTVT--GATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDFRAD---LDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAI 636
G LH G E++ LMR P+ N EG TAL R+DL + + +N+ N D V G TPL A+ SA L+ +G+ NA D++G+T L L CR + S I D A ++ D G T L YA Y + ++IE LLR GADP+ D G A+
Sbjct: 25 GKGQTPLHLVAQWGEKEIIHFLLMRGAD--PQLTN---AEGETALHDLCKRSRDDLVKMFLKVNKQFRKSINIDAVDDRGRTPLLVALNHRDKKSALLLLKKGAKPNAIDEMGLTALHLMCRRNYDSKSIEEILDAMAGYCPVNARDLKGRTALHYALYHGDEDVIELLLRRGADPNTPDNEGTTAM 206
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI000C71C85D (ankyrin-3-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71C85D) HSP 1 Score: 67.4 bits (163), Expect = 2.580e-9 Identity = 62/204 (30.39%), Postives = 89/204 (43.63%), Query Frame = 1
Query: 115 LHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALA---LMEEREDLADLIMSIN-------QTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGH---------------RSMVEMLI-----KDFRADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAI 636
LH + G+ E V++ L N NE+G T L + L E+ DL DL IN Q D N + G + LH AV+ + L+ RG+ N A+ G+TPL+L C++ H S+ EM K +++ D G T L A R + N++E LLR GADP+ DK G +
Sbjct: 21 LHSTLDSGDKEKVESLLRNGADP-----NITNEQGLTPLHVICNNLGEDDVDLMDLFFRINEELNRPVQLDAQNKE---GNSALHLAVIRGNKKAIELLLRRGARSNLANAEGLTPLLLICKIYHDADDXXXXXXXXXXNESLAEMFFRINEEKHQLVQVNVQDNQGNTPLILAMDRGDENLMELLLRRGADPNTTDKEGSSPL 216
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI000C71AFCA (ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71AFCA) HSP 1 Score: 67.0 bits (162), Expect = 3.880e-9 Identity = 58/193 (30.05%), Postives = 88/193 (45.60%), Query Frame = 1
Query: 100 WAHVDLHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEERE-DLADLIMSINQTDVN----NTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDF---------RADLDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRGMKAI 636
W + L AV +GN V+ L R N N EG T + + + + +LA++I I+ + + TG TPLH A A L+ +G+N N +K G TPL C ++ + L+K F LD+ DK G T L A R + ++E LLR+GADPD ++ G+ +
Sbjct: 418 WGNSPLLLAVQNGNHAAVEFLLRRGASP-----NLANAEGLTPMHIICEADCDHELAEMIFEISDIKYHPIHVDAQDETGNTPLHVAAYFRQRLVADLLLRKGANPNLVNKAGCTPLHFICN--NKDIDVDLLKTFIEIKNEIQQSVQLDIGDKIGDTPLHLAVKRENLEVVELLLRNGADPDFANEDGLTPL 603
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: A0A6H5IHA3_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IHA3_9HYME) HSP 1 Score: 65.9 bits (159), Expect = 8.080e-9 Identity = 54/188 (28.72%), Postives = 87/188 (46.28%), Query Frame = 1
Query: 154 KTTLMRYVHKYPKRIN-DHNEEGRTALALALMEEREDLADLIMSINQTD---VNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCRLGHRSMVEMLIKDFRAD------LDLVDKTGWTCLFYATYRNEINIIEFLLRSGADPDHEDKRG---------MKAIDWEGTWNL 660
+ T++R + K R + ++ G T +A D+A + + Q V +D G PL AVL L + L+ G++ N + K G+T L + C G + EML +F D +D D+ G + L++A YRN ++ +FLLR GADP+ +G M + + E W L
Sbjct: 121 RNTVLRELFKIYDRFDVNYTGNGVTHFHVACQLHETDIAKKFLELGQDPNCCVEQSDRRLGDPPLSLAVLRGLKEMVKLLLRAGADPNWSSKHGVTCLHVICMEGDGVLAEMLF-EFSKDEYRPIQIDARDQLGRSVLYWALYRNNKSVAQFLLRKGADPNLASNKGLTPLHATCLMMSYEEEDLWKL 307
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Match: UPI001EEB75A6 (alpha-latrocrustotoxin-Lt1a-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB75A6) HSP 1 Score: 65.1 bits (157), Expect = 1.400e-8 Identity = 52/182 (28.57%), Postives = 93/182 (51.10%), Query Frame = 1
Query: 115 LHDAVLDGNIELVKTTLMRYVHKYPKRINDHNEEGRTALALALMEEREDLADLIMSINQTDVNNTDTVTGATPLHNAVLLDLSSSARKLVYRGSNVNAADKVGMTPLMLGCR-----LGHRSMVEMLIKDFRADLDLVDKTGWTCLFYAT---YRNEINIIEFLLRSGADPDHEDKRGMKAI 636
L + G+ +LV T+ + KY I+ T L LA E+ + LI+ Q D+N+ G T LH+A+ + ++AR L+ +G++ NAA + G TPL L + + + +++++++ + +++ VD G T L YA IN+ L++ GADP DK+G+ +
Sbjct: 257 LFQLIKMGSTDLVNITVA--IGKYDINID-------TPLHLAAHEKEIETISLILENEQVDINSRGNY-GQTALHHAIRFRMPNTARYLLKKGADPNAATENGATPLYLAAKTYYHYMTNTELIDIILETGKCNINGVDNYGRTPLHYAIEGYIPGTINVRR-LIKMGADPGIADKKGVTPL 427 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50797.12334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig50797.12334.1 >prot_H-elongata_contig50797.12334.1 ID=prot_H-elongata_contig50797.12334.1|Name=mRNA_H-elongata_contig50797.12334.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=215bp MIEMKYTETVRMWPFYQLRRFLGWAHVDLHDAVLDGNIELVKTTLMRYVHback to top mRNA from alignment at H-elongata_contig50797:224..2468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig50797.12334.1 ID=mRNA_H-elongata_contig50797.12334.1|Name=mRNA_H-elongata_contig50797.12334.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2245bp|location=Sequence derived from alignment at H-elongata_contig50797:224..2468+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig50797:224..2468+ >mRNA_H-elongata_contig50797.12334.1 ID=mRNA_H-elongata_contig50797.12334.1|Name=mRNA_H-elongata_contig50797.12334.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1290bp|location=Sequence derived from alignment at H-elongata_contig50797:224..2468+ (Himanthalia elongata Himel1 dioecious)back to top |