mRNA_H-elongata_contig50059.12228.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50059.12228.1
Unique NamemRNA_H-elongata_contig50059.12228.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: D7FSF1_ECTSI (Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF1_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 2.460e-113
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL SRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAH 183
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A7S2CHD5_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2CHD5_9STRA)

HSP 1 Score: 306 bits (783), Expect = 3.530e-104
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+NIDNRQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEA+QNSN NMVIMLIGNKSDL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+ ILSGVYD TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQNSNPNMVIMLIGNKSDLDHRRAVSTKEGEQFAEENGLIFLETSAKTAANVEQAFIKTAEKIYEKILSGVYDVTNEAH 183
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A7S2V0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L3_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.510e-103
Identity = 153/168 (91.07%), Postives = 160/168 (95.24%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TF+HLTRWLEEARQNSNSNMVIMLIGNKSDL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD TNE H
Sbjct:   46 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAEENGLIFLETSAKTAENVEAAFIKTAEKIYENILSGVYDVTNEAH 213
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A835Z1V8_9STRA (Rab2A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V8_9STRA)

HSP 1 Score: 304 bits (778), Expect = 2.270e-103
Identity = 152/168 (90.48%), Postives = 157/168 (93.45%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQP+HDLTIGVEFGARMIN+D RQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL  RRAV+TKEGEQFA ENGLIFLETSAK A NVE AFI+TA KIY NI SGVYDPTNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPLHDLTIGVEFGARMINVDARQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAAENGLIFLETSAKTAANVEAAFIQTAEKIYGNIQSGVYDPTNEAH 183
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A6V1NY85_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NY85_HETAK)

HSP 1 Score: 297 bits (761), Expect = 8.220e-101
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNE 498
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID+R++KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNK+DL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD  +E
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDIDSRKIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKADLEHRRAVSTKEGEQFAEENGLIFLETSAKTAQNVEDAFIKTAEKIYENILSGVYDIQSE 181
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: M4B5K5_HYAAE (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=M4B5K5_HYAAE)

HSP 1 Score: 296 bits (757), Expect = 3.340e-100
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI+N+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTA+KIY NI SGV D TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEAH 183
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A2D4BXC9_PYTIN (Rab2 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC9_PYTIN)

HSP 1 Score: 298 bits (764), Expect = 2.160e-99
Identity = 150/168 (89.29%), Postives = 156/168 (92.86%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDN+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTAAKIY NI SGV D TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFVKTAAKIYSNIQSGVCDVTNEAH 183
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A485LBB8_9STRA (Aste57867_18783 protein n=7 Tax=Oomycota TaxID=4762 RepID=A0A485LBB8_9STRA)

HSP 1 Score: 291 bits (744), Expect = 3.310e-98
Identity = 146/168 (86.90%), Postives = 155/168 (92.26%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDN+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAH 183
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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A024UMG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMG6_9STRA)

HSP 1 Score: 291 bits (744), Expect = 8.590e-98
Identity = 146/168 (86.90%), Postives = 155/168 (92.26%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 504
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNE H
Sbjct:   44 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAH 211
[Close]
BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A397CHN3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CHN3_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.380e-96
Identity = 146/167 (87.43%), Postives = 155/167 (92.81%), Query Frame = 1 
Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEV 501
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNEV
Sbjct:  105 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEV 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF1_ECTSI2.460e-11398.21Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2CHD5_9STRA3.530e-10491.07Hypothetical protein n=3 Tax=Dictyochophyceae TaxI... [more]
A0A7S2V0L3_9STRA1.510e-10391.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z1V8_9STRA2.270e-10390.48Rab2A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1NY85_HETAK8.220e-10190.36Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
M4B5K5_HYAAE3.340e-10088.10Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]
A0A2D4BXC9_PYTIN2.160e-9989.29Rab2 family GTPase, putative n=1 Tax=Pythium insid... [more]
A0A485LBB8_9STRA3.310e-9886.90Aste57867_18783 protein n=7 Tax=Oomycota TaxID=476... [more]
A0A024UMG6_9STRA8.590e-9886.90Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A397CHN3_9STRA1.380e-9687.43Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50059contigH-elongata_contig50059:70..3443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score331.6
Seed ortholog evalue2.1e-88
Seed eggNOG ortholog2880.D7FSF1
KEGG koko:K07877
KEGG Pathwayko04152,map04152
GOsGO:0000139,GO:0000331,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0006810,GO:0006897,GO:0006909,GO:0006950,GO:0006970,GO:0008150,GO:0008219,GO:0009628,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0030587,GO:0031090,GO:0031164,GO:0031410,GO:0031982,GO:0031984,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0090702,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0098805,GO:0099120
EggNOG free text desc.GTPase activity
EggNOG OGsCOG1100@1,KOG0098@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRab2A, RAB family GTPase
Ec32 orthologEc-25_000850.1
Exons4
Model size504
Cds size504
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50059.12228.1prot_H-elongata_contig50059.12228.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50059 70..3443 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930823.9273777-CDS-H-elongata_contig50059:69..2101622930823.9273777-CDS-H-elongata_contig50059:69..210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 70..210 -
1691679586.0195706-CDS-H-elongata_contig50059:69..2101691679586.0195706-CDS-H-elongata_contig50059:69..210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 70..210 -
1622930823.9431455-CDS-H-elongata_contig50059:794..8661622930823.9431455-CDS-H-elongata_contig50059:794..866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 795..866 -
1691679586.0310571-CDS-H-elongata_contig50059:794..8661691679586.0310571-CDS-H-elongata_contig50059:794..866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 795..866 -
1622930823.9616168-CDS-H-elongata_contig50059:1454..16041622930823.9616168-CDS-H-elongata_contig50059:1454..1604Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 1455..1604 -
1691679586.0410883-CDS-H-elongata_contig50059:1454..16041691679586.0410883-CDS-H-elongata_contig50059:1454..1604Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 1455..1604 -
1622930823.9800282-CDS-H-elongata_contig50059:3302..34431622930823.9800282-CDS-H-elongata_contig50059:3302..3443Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 3303..3443 -
1691679586.051914-CDS-H-elongata_contig50059:3302..34431691679586.051914-CDS-H-elongata_contig50059:3302..3443Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50059 3303..3443 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50059.12228.1

>prot_H-elongata_contig50059.12228.1 ID=prot_H-elongata_contig50059.12228.1|Name=mRNA_H-elongata_contig50059.12228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQ
ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIM
LIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAA
KIYDNILSGVYDPTNEVH
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mRNA from alignment at H-elongata_contig50059:70..3443-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50059.12228.1 ID=mRNA_H-elongata_contig50059.12228.1|Name=mRNA_H-elongata_contig50059.12228.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3374bp|location=Sequence derived from alignment at H-elongata_contig50059:70..3443- (Himanthalia elongata Himel1 dioecious)
GGCGTTGGCAAGTCATGTTTGCTTCTACAATTCACCGACAAGCGGTTCCA
GCCCGTCCACGACCTGACGATCGGTGTAGAGTTTGGGGCGCGCATGATCA
ACATCGACAACCGACAGATGAAGCTGCAGATTTGGGATACGGTAAGCCAT
CAGGACTGGTGGTCGTAACCACATAAGCGGGTTGATTTTGATTTTGGTCC
ATCGATCCCCCTCTCCCCCTGCTTACAATAGCTAATGGCCCTTCTATTGC
TCCTTCTCTAGACCGCCTCATGGTGCTAAGAAGGCGTGTATGTTCGAAGG
GTTGGAATGAGTTCATATGTTTTTAAATAATAATGTATAAGAATGTAATG
TATATTCGAGCTTAACTATACCTGCGCATGGCGTGTTACCATTGTTACCA
TTTTTAATGTTTGGCAAGGATCGCTTATTCTTGACAAAAGCAACAAAGCG
GCAGATCAGCAGATAAAGCGGCAAAGGTGCCTTCGGACCAGGGGTTCTGT
AATACTCTGCATTGCTACACAAGACAGTACAGTACACTATCACTGCCTTC
CATGTTATGTGATGCCATTCCATTCTATGTTATGTTATTATAAAAAAAAC
ATATGAACTTATTCCAACCCTCCAAACATCCACACCTTCTTAGCACCATG
AAAGGTGCAATCCAGGGACCAACTATCGTCAGGTTCGAATGTGGACATTT
AAACTACATTTAAGCACAAAATCGTCATAGTATGTGAATATTCATGATTA
TTCATGATTATTCATCATATAGGGAGACGACAAACCAGAGTATAGGGAGT
GAACTGTGTGTGGTGGTTAGGAAAGGTTAGACACAGCATTAGCATTATCC
ATATGTAGAAAGTGATCATGCCTATCGATTGAGGTTGTAGAGATATAATT
ATTCATCGTATGGGGTCGTAAAGTCAAAGCATAGCCTAGCCTAGAGGGTG
GACTGTGGCGGTTAGGAAGGGTGAAGTATTTTCATCACTTCATCATTTCA
TAATAATCATTATAATAATCATGATAATAATCATTAGAGTAATAAATCGT
TAGGAAGGGTGAAGTATTCTCATCACTTCATTATAATCATTATAATAATC
ATTAGAGTAAGAAATCGTTAGGAAGGGTGAAGTATTCTTATCACTTCATT
ACAGTATATATATAGTAGCATAGTCTTGAGTGAATTTCTGGAGTCCGAGC
CTAGATAGGATAATCAAACAAATTGTTTCGTCTAAAATGACGGAGGAAAT
GATAAACGAGAGAAAGTGGGGTCATACAAGGGTAGTCATATGTGATTAAC
TATCGTGTGGGAGCGCCAAACCAGAGTCTAGGGGGTGAACTGTGTGTGGT
GGTTAGGAAGGGTTAGGCATAGCATTGTACGTATGTCTCAGTTAAATTTT
AGGTAAAGCTTCTGGAAGCATTTTAATAATTAATATAGCTATTAATATAT
AGCCTAACCTAAAGGAGAGAGGGGATCTTTCAGTAGCAACATTTTAACCT
AAGGAGTAACACATTTTTTACGAAGGGGAAGGGAAAAGAGTTAAGAGGGT
CATAGACCTCGGTTAACCAGTATGCCAACCAAAACTGAATGCGTGAGGTG
TATGTGTCGTCTCTCGGGAGTCTACCAAGGTGATGGTGATGGTGAGAGAA
GAAGGCAAAAGCTAAAATAAAATAGTACTCGTATGTCCATCATGAAGGGG
GTTATACCATTCTATGTTATGTCCTATTATCTAATATCATCCCCTGGCCA
TGTCGCACTGTACCATGACTGGTCATTCCATTCCATCCCATACGTACTAT
ACCATACTATACCATGTCATGCCATGCTATCTCGAGTAGGCGGGGCAGGA
GTCTTTCCGGTCGATCACGCGGTCGTACTATCGAGGCGCGGCGGGCGCGT
TGCTGGTGTACGACATCACGCGCAGAGACACATTTAATCACCTGACGCGC
TGGCTCGAGGAGGCCAGGCAAAACTCCAACTCCAACATGGTGAGCTATTA
ATAGTGGAAGGTTAACATGCCCTGCCACAGCTTGGCTGCAGCAAAAATAT
CGGTAATAGTAGCAGTAATAGTAGTTGTAGTATAATAGTATTAGTAATAG
TATTAGTATTAATAGCACAAATATCACCAGCGACGAAGGACGATGCTCCA
GTACTGCGCCTCTTTACAATATCTCCATTCACACCTGTCTTGAAACGTTG
ATCAGTGATCCCAGCAGCACCCGCTGCGACGACTACCGCGCGACCCCCCC
CCTCCACCCTTCCGTCCCTTCGCTCCATCATCTCTCCATCCTATCTTTAG
GACCACTTCAAACTTATTACCAGAGAGATCCGAACCTCCGTCGTTGCTCG
AGTATATTGTATACTATACATGACATAATATATTATTTCATACTAGACAT
GATATGTTGGCGTTTTTGTGTGCCGCGTACGGAAGACTTACCTAAAATAT
GGAGATGTACGGGAATATATCGAATCACGCAATGTGATGAACCATCTCGA
ATTGTGAGGGACGATCGTAACGGCAACATATTTGAGAATTAAAAGTATAT
ATGGGTTTTGGCATGAATACCCGTCAGGTGATCATGCTGATCGGCAATAA
GTCGGACCTTGCTAGTCGGAGGGCGGTGACAACAAAGGAGGGGGAACAGG
TGAGGCGTCATTTTTTATGGCGTTTGGTTGGATATCCCGAGCTTGTGCTT
GGACTTACGCCTCGATTCTCCCGAAAATAGGTTGGAATAGGGAGAGGGGA
CACGAAAAACTCTTGTGGACGGTGACCAATATTTCACAACTATTTTATTC
CAATTATCCCTGTCAAGAGCTCCCATCGCTCGCCCGCGACATCGATCCAC
CTATCGATCGATCGATAGGCATGATTAATTGGGAAAAGCCGCCGATATAT
GGCATATATTACCTTCATTTCTGCGTAGAAGCGTGTCGACTATAAAGCTA
CTGTAATCACAAAATGTATGGTTTAGGGTAAAGTATAAGCGGAAGGATGC
TGTGGTGCGCACACCTGTCTTCTTTTGCGCTTGGAAGCTTCGGAGCACTC
CCTTCTCCTTCCCTTCCCTTCCCTTCTCCTTCCCTTCCCTTCCCTTCCCT
TCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCT
TCCCTTCCCTTCCCTTCCCTTCCCTGATCCCTGTACTGTGAATGCGCCAT
CGTTGTGACTCTAATGTTTTTTTCGTTGGGAAGTTCGCGGAAGAGAACGG
TCTGATTTTTCTTGAAACGAGCGCCAAGATGGCGACCAACGTGGAGACAG
CGTTCATCAAAACAGCTGCCAAGATCTACGATAACATTCTCTCGGGCGTC
TACGACCCCACTAACGAGGTACAT
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Coding sequence (CDS) from alignment at H-elongata_contig50059:70..3443-

>mRNA_H-elongata_contig50059.12228.1 ID=mRNA_H-elongata_contig50059.12228.1|Name=mRNA_H-elongata_contig50059.12228.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1008bp|location=Sequence derived from alignment at H-elongata_contig50059:70..3443- (Himanthalia elongata Himel1 dioecious)
GGCGTTGGCAAGTCATGTTTGCTTCTACAATTCACCGACAAGCGGTTCCA
GCCCGTCCACGACCTGACGATCGGTGTAGAGTTTGGGGCGCGCATGATCA
ACATCGACAACCGACAGATGAAGCTGCAGATTTGGGATACGGGCGTTGGC
AAGTCATGTTTGCTTCTACAATTCACCGACAAGCGGTTCCAGCCCGTCCA
CGACCTGACGATCGGTGTAGAGTTTGGGGCGCGCATGATCAACATCGACA
ACCGACAGATGAAGCTGCAGATTTGGGATACGGCGGGGCAGGAGTCTTTC
CGGTCGATCACGCGGTCGTACTATCGAGGCGCGGCGGGCGCGTTGCTGGT
GTACGACATCACGCGCAGAGACACATTTAATCACCTGACGCGCTGGCTCG
AGGAGGCCAGGCAAAACTCCAACTCCAACATGGCGGGGCAGGAGTCTTTC
CGGTCGATCACGCGGTCGTACTATCGAGGCGCGGCGGGCGCGTTGCTGGT
GTACGACATCACGCGCAGAGACACATTTAATCACCTGACGCGCTGGCTCG
AGGAGGCCAGGCAAAACTCCAACTCCAACATGGTGATCATGCTGATCGGC
AATAAGTCGGACCTTGCTAGTCGGAGGGCGGTGACAACAAAGGAGGGGGA
ACAGGTGATCATGCTGATCGGCAATAAGTCGGACCTTGCTAGTCGGAGGG
CGGTGACAACAAAGGAGGGGGAACAGTTCGCGGAAGAGAACGGTCTGATT
TTTCTTGAAACGAGCGCCAAGATGGCGACCAACGTGGAGACAGCGTTCAT
CAAAACAGCTGCCAAGATCTACGATAACATTCTCTCGGGCGTCTACGACC
CCACTAACGAGGTACATTTCGCGGAAGAGAACGGTCTGATTTTTCTTGAA
ACGAGCGCCAAGATGGCGACCAACGTGGAGACAGCGTTCATCAAAACAGC
TGCCAAGATCTACGATAACATTCTCTCGGGCGTCTACGACCCCACTAACG
AGGTACAT
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