prot_H-elongata_contig50059.12228.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig50059.12228.1
Unique Name	prot_H-elongata_contig50059.12228.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	168

Homology

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: D7FSF1_ECTSI (Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF1_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 2.460e-113
Identity = 165/168 (98.21%), Postives = 166/168 (98.81%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL SRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAH 183

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A7S2CHD5_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2CHD5_9STRA)

HSP 1 Score: 306 bits (783), Expect = 3.530e-104
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+NIDNRQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEA+QNSN NMVIMLIGNKSDL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+ ILSGVYD TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQNSNPNMVIMLIGNKSDLDHRRAVSTKEGEQFAEENGLIFLETSAKTAANVEQAFIKTAEKIYEKILSGVYDVTNEAH 183

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A7S2V0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L3_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.510e-103
Identity = 153/168 (91.07%), Postives = 160/168 (95.24%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TF+HLTRWLEEARQNSNSNMVIMLIGNKSDL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD TNE H
Sbjct:   46 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAEENGLIFLETSAKTAENVEAAFIKTAEKIYENILSGVYDVTNEAH 213

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A835Z1V8_9STRA (Rab2A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V8_9STRA)

HSP 1 Score: 304 bits (778), Expect = 2.270e-103
Identity = 152/168 (90.48%), Postives = 157/168 (93.45%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQP+HDLTIGVEFGARMIN+D RQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL  RRAV+TKEGEQFA ENGLIFLETSAK A NVE AFI+TA KIY NI SGVYDPTNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPLHDLTIGVEFGARMINVDARQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAAENGLIFLETSAKTAANVEAAFIQTAEKIYGNIQSGVYDPTNEAH 183

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A6V1NY85_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NY85_HETAK)

HSP 1 Score: 297 bits (761), Expect = 8.220e-101
Identity = 150/166 (90.36%), Postives = 158/166 (95.18%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNE 166
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID+R++KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNK+DL  RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD  +E
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDIDSRKIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKADLEHRRAVSTKEGEQFAEENGLIFLETSAKTAQNVEDAFIKTAEKIYENILSGVYDIQSE 181

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: M4B5K5_HYAAE (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=M4B5K5_HYAAE)

HSP 1 Score: 296 bits (757), Expect = 3.340e-100
Identity = 148/168 (88.10%), Postives = 156/168 (92.86%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI+N+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTA+KIY NI SGV D TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEAH 183

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A2D4BXC9_PYTIN (Rab2 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC9_PYTIN)

HSP 1 Score: 298 bits (764), Expect = 2.160e-99
Identity = 150/168 (89.29%), Postives = 156/168 (92.86%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDN+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTAAKIY NI SGV D TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFVKTAAKIYSNIQSGVCDVTNEAH 183

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A485LBB8_9STRA (Aste57867_18783 protein n=7 Tax=Oomycota TaxID=4762 RepID=A0A485LBB8_9STRA)

HSP 1 Score: 291 bits (744), Expect = 3.310e-98
Identity = 146/168 (86.90%), Postives = 155/168 (92.26%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDN+Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNE H
Sbjct:   16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAH 183

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BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A024UMG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMG6_9STRA)

HSP 1 Score: 291 bits (744), Expect = 8.590e-98
Identity = 146/168 (86.90%), Postives = 155/168 (92.26%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEVH 168
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNE H
Sbjct:   44 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAH 211

[Close]

BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Match: A0A397CHN3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CHN3_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.380e-96
Identity = 146/167 (87.43%), Postives = 155/167 (92.81%), Query Frame = 0

Query:    1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEV 167
            GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++Q+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL  RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNEV
Sbjct:  105 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEV 271

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot

BLAST of mRNA_H-elongata_contig50059.12228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSF1_ECTSI	2.460e-113	98.21	Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A7S2CHD5_9STRA	3.530e-104	91.07	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A7S2V0L3_9STRA	1.510e-103	91.07	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A835Z1V8_9STRA	2.270e-103	90.48	Rab2A, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A6V1NY85_HETAK	8.220e-101	90.36	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
M4B5K5_HYAAE	3.340e-100	88.10	Uncharacterized protein n=26 Tax=Oomycota TaxID=47...	[more]
A0A2D4BXC9_PYTIN	2.160e-99	89.29	Rab2 family GTPase, putative n=1 Tax=Pythium insid...	[more]
A0A485LBB8_9STRA	3.310e-98	86.90	Aste57867_18783 protein n=7 Tax=Oomycota TaxID=476...	[more]
A0A024UMG6_9STRA	8.590e-98	86.90	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A397CHN3_9STRA	1.380e-96	87.43	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 15..31 score: 32.76 coord: 95..108 score: 50.42 coord: 130..152 score: 44.2 coord: 33..55 score: 50.23
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 1..168 e-value: 0.0094 score: -8.6
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 1..152 e-value: 6.0E-9 score: -4.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 1..155 e-value: 3.4E-25 score: 99.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..155 e-value: 1.6E-91 score: 320.0
None	No IPR available	GENE3D	3.40.50.300		coord: 1..165 e-value: 1.9E-60 score: 205.7
None	No IPR available	PANTHER	PTHR24073:SF990	RAS-RELATED PROTEIN RAB-2A	coord: 1..167
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..167
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..168 score: 32.282
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 2..145 e-value: 8.1E-29 score: 98.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..153 e-value: 1.9E-56 score: 190.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..159

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig50059	contig	H-elongata_contig50059:70..3443 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig50059.12228.1	mRNA_H-elongata_contig50059.12228.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig50059 70..3443 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig50059.12228.1 ID=prot_H-elongata_contig50059.12228.1|Name=mRNA_H-elongata_contig50059.12228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQMKLQIWDTAGQ
ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIM
LIGNKSDLASRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAA
KIYDNILSGVYDPTNEVH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase