mRNA_H-elongata_contig49579.12154.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: D7FKR7_ECTSI (L-galactono-1,4-lactone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR7_ECTSI) HSP 1 Score: 293 bits (750), Expect = 1.550e-92 Identity = 150/217 (69.12%), Postives = 172/217 (79.26%), Query Frame = 1
Query: 7 QVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPLEHRDEIPISQVQI 657
+VERIIS+AH GKR+RVVGNALSPNG+GLSE+ MLSLG CDR+L VD++K TVT EAG SI+EQQLGGFLQVGAHGTGA IPPVDEQVV MKLVTP+LGT+ELSN+ +P+LFR+ KVGLGA GVVTEVTIKCV RH+L E+T+VMTRAEVKANH ALLRSNKHIRYMWIPYTDAVVVVR NP++ + VQ+
Sbjct: 86 EVERIISEAHNSGKRIRVVGNALSPNGLGLSEDAMLSLGQCDRVLHVDKKKGTVTVEAGXXXXXXXXXXXXXXXXXXXXXSISEQQLGGFLQVGAHGTGATIPPVDEQVVGMKLVTPKLGTLELSNEKNPSLFRMAKVGLGAFGVVTEVTIKCVERHQLVESTAVMTRAEVKANHDALLRSNKHIRYMWIPYTDAVVVVRCNPVDLHGKSTTRPVQM 302
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A835ZG22_9STRA (L-galactono-1,4-lactone dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG22_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.910e-91 Identity = 145/204 (71.08%), Postives = 167/204 (81.86%), Query Frame = 1
Query: 10 VERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPLE 621
VE+II+ AH+ G +VRVVGNALSPN IGLS +TML+L CD++L VD +KTV +AGARVQQVVD L P+ LTLQNYASI+EQQ+GGFLQVGAHGTG IPPVDEQ+++M+LVTP LG IELS P LFRL KVGLGA+GVVTEVTI+CV RH L E T V+TRAEVKA H LL+ N+HIRYMWIPYTDAVVVV NP E
Sbjct: 54 VEQIIAGAHKAGTKVRVVGNALSPNAIGLSTDTMLTLALCDKVLSVDPMRKTVRVQAGARVQQVVDALTPYNLTLQNYASISEQQIGGFLQVGAHGTGVTIPPVDEQIISMRLVTPGLGAIELSEDLDPDLFRLAKVGLGALGVVTEVTIQCVPRHLLTEKTWVLTRAEVKAQHRRLLKENRHIRYMWIPYTDAVVVVACNPAE 257
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A061R9J8_9CHLO (L-galactono-1,4-lactone dehydorogenase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R9J8_9CHLO) HSP 1 Score: 264 bits (674), Expect = 4.740e-81 Identity = 129/202 (63.86%), Postives = 161/202 (79.70%), Query Frame = 1
Query: 7 QVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSN 612
++ERI+++AH EG+++R VG+ LSPNGI SE+ M+S+G D++L VD+ VT +AGARVQ VV+ L PHGLTLQN+ASI EQQ+GGF QVGAHGTGAAIPPVDEQVV+MKLVTP GT+ELS +P LFRL + GLGA+GVV EVT++CV H+L ETT V + AEVK H + LR N+H+RYMWIPYTD VVVV +N
Sbjct: 115 ELERIVAEAHNEGRKIRAVGSGLSPNGIAFSEQCMISMGLLDKVLSVDEGAGRVTVQAGARVQDVVEALRPHGLTLQNFASIREQQIGGFTQVGAHGTGAAIPPVDEQVVSMKLVTPGQGTVELSESVNPELFRLARCGLGALGVVAEVTLQCVPAHRLVETTWVSSMAEVKKKHASWLRENQHLRYMWIPYTDTVVVVANN 316
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A250XCV1_9CHLO (FAD-binding PCMH-type domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XCV1_9CHLO) HSP 1 Score: 263 bits (673), Expect = 1.300e-80 Identity = 129/207 (62.32%), Postives = 162/207 (78.26%), Query Frame = 1
Query: 1 ELQVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPLE 621
E +VE + AH G+++RV+G+ +SPNG+GLSEE ML + D+I+ V+ EK VT +AG RVQQV D L P+GLTLQNYASI +QQ+GGF+QVGAHGTGA +PPVD+QVVAM+LVTP +G I LS + P LF L KVGLGA+GV+++VT++CV RH+L ETTS T AEVK NH L+ N H+RYMWIPYTD VVVVRSNPL+
Sbjct: 142 EAEVEVFVRAAHDAGQKLRVMGSGISPNGLGLSEEGMLGMALMDKIVDVNTEKMQVTVQAGCRVQQVADALKPYGLTLQNYASIRDQQIGGFVQVGAHGTGATLPPVDDQVVAMRLVTPAMGVITLSKQDEPELFSLAKVGLGALGVLSQVTLRCVPRHQLLETTSTATVAEVKKNHKRWLQENLHLRYMWIPYTDTVVVVRSNPLQ 348
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A2P6TFJ6_CHLSO (L-galactono-1,4-lactone mitochondrial-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TFJ6_CHLSO) HSP 1 Score: 257 bits (656), Expect = 2.690e-78 Identity = 130/213 (61.03%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 7 QVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSN--PLEHRDEIP 639
++E + AH G+++R VG+ LSPNG+G SEE M+SL DR+L+VD+EK+ VT +AGARVQ V DEL HGL+LQNYASI EQ +GGF QV AHGTGA+IPPVDEQVVA+KLVTP LGTIELS P LF L KVGLG +GVV EVT++CV H+L E TSV + AEV+A H L+ NKH+RYMW+P+TD+VVVV N P + IP
Sbjct: 137 ELEATVRAAHDAGRKLRCVGSGLSPNGLGFSEEGMVSLALMDRVLKVDEEKQQVTVQAGARVQAVADELRKHGLSLQNYASIREQTIGGFTQVSAHGTGASIPPVDEQVVALKLVTPALGTIELSKSQDPQLFDLAKVGLGCLGVVAEVTLQCVPAHRLLEQTSVASVAEVQAQHAQRLKDNKHLRYMWLPHTDSVVVVTCNKVPQDQEPAIP 349
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A2K3N5G9_TRIPR (L-galactono-1,4-lactone dehydrogenase (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3N5G9_TRIPR) HSP 1 Score: 248 bits (632), Expect = 9.780e-78 Identity = 122/204 (59.80%), Postives = 156/204 (76.47%), Query Frame = 1
Query: 7 QVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPL 618
++ER++S+AH+ R+R VG+ LSPNGIGLS M++L D IL VD+EKK V +AG RVQQ+VD + HGLTLQN+ASI EQQ+GG +QVGAHGTGA +PP+DEQV+AMKLVTP GTIE+S + P LF L + GLG +GVV EVT++CV R +L E T V T E+K NH LL NKH++Y++IPYTD+VVVVR NP+
Sbjct: 90 ELERVVSEAHKGKTRIRPVGSGLSPNGIGLSRIGMVNLSLMDSILEVDKEKKIVRVQAGIRVQQLVDGIKEHGLTLQNFASIREQQIGGIIQVGAHGTGARLPPIDEQVIAMKLVTPAKGTIEISKEKDPELFYLARCGLGGLGVVAEVTLQCVDRQELVEHTVVSTMDEIKKNHKKLLSENKHVKYLYIPYTDSVVVVRCNPV 293
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A7S0NSM8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NSM8_9EUKA) HSP 1 Score: 252 bits (643), Expect = 1.430e-77 Identity = 126/203 (62.07%), Postives = 159/203 (78.33%), Query Frame = 1
Query: 10 VERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPL 618
VE ++S AH G ++RVVG+ALSPNGIGLSE ML++ CDR+L +D EK T EAGARV++VV+ L P+GLTLQNYASI EQQ+GGFLQVGAHGTGA +PPVDEQ++ M+L TP LG++ELS +H+P LFRL +VGLGA+G+VTEVTI+CV H+L + T TR V H L +++H+RYMWIPYTD VVVV +PL
Sbjct: 24 VESLLSAAHAAGSKLRVVGSALSPNGIGLSEGGMLNMVLCDRVLSIDAEKMQATVEAGARVKEVVEALRPYGLTLQNYASIAEQQIGGFLQVGAHGTGARVPPVDEQIIRMRLQTPALGSLELSEEHNPRLFRLARVGLGALGIVTEVTIQCVPAHRLLQHTYTDTREGVIKRHQENL-AHQHMRYMWIPYTDTVVVVTCDPL 225
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: K3ZIZ6_SETIT (FAD-binding PCMH-type domain-containing protein n=2 Tax=Paniceae TaxID=147428 RepID=K3ZIZ6_SETIT) HSP 1 Score: 247 bits (630), Expect = 4.270e-77 Identity = 123/202 (60.89%), Postives = 153/202 (75.74%), Query Frame = 1
Query: 10 VERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNP 615
+E ++ AH+E +++R +G+ LSPNGIGLS M+SL D++L VD +KKTVT +AG RV ++VD L HGLTLQN+ASI EQQ+GGF+QVGAHGTGA +PPVDEQV++MKLVTP GTIELS + P LF L + GLG +GVV EVT++CV RH+L E T V EVK NH L NKHI+Y+WIPYTD VVVVR NP
Sbjct: 115 LEDALATAHKERRKLRPLGSGLSPNGIGLSRAGMVSLALMDKVLDVDVKKKTVTVQAGIRVAELVDALREHGLTLQNFASIREQQVGGFIQVGAHGTGARLPPVDEQVISMKLVTPAKGTIELSREKDPELFYLARCGLGGLGVVAEVTLQCVERHQLVEHTFVSNADEVKKNHKKWLSENKHIKYLWIPYTDTVVVVRCNP 316
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A7S0R7R7_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R7R7_9CHLO) HSP 1 Score: 254 bits (648), Expect = 5.160e-77 Identity = 121/204 (59.31%), Postives = 158/204 (77.45%), Query Frame = 1
Query: 7 QVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPALFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPL 618
++E +++KAH++G ++R +G+ALSPNG+G S+E +++L D+++ VD E+ VT +AGARV QV D L PHGL LQN+ASI EQQLGGF QVGAHGTGA +PPVDE+VV +K+VTP GT++LS + +P LF L KV +G +GVV EVTIKCV HKL E T V++R+ +K NH LLR NKHIRYMWIPYT V+VV NPL
Sbjct: 112 ELETLVAKAHKKGTKLRPIGSALSPNGVGFSDEELVNLAMLDQVVNVDAERGLVTVQAGARVSQVTDALRPHGLVLQNFASIAEQQLGGFTQVGAHGTGATLPPVDERVVGLKIVTPGRGTLQLSAESNPELFNLAKVAMGCLGVVAEVTIKCVPAHKLVERTYVVSRSFIKENHERLLRENKHIRYMWIPYTQDVIVVACNPL 315
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Match: A0A7R9Y180_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y180_9VIRI) HSP 1 Score: 248 bits (634), Expect = 9.070e-77 Identity = 123/216 (56.94%), Postives = 166/216 (76.85%), Query Frame = 1
Query: 7 QVERIISKAHREGKRVRVVGNALSPNGIGLSEETMLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEQQLGGFLQVGAHGTGAAIPPVDEQVVAMKLVTPQLGTIELSNKHSPA-LFRLVKVGLGAMGVVTEVTIKCVARHKLRETTSVMTRAEVKANHHALLRSNKHIRYMWIPYTDAVVVVRSNPLEHRDEIPISQV 651
++E I++ AH G+RVRVVG+ALSPNG GL + M+SL CD++L VD+++K VT EAG RV+++V+ L P+GLTL+NYASI EQQ+GGF+ VGAHGTGAA+PPVDEQVV++KLVTP GT+ELS + + A LFRL +V +G +G ++EVT++ V H+L E T V TR V+ H A L+ KH+RYMW+PYTD VVVV SNP++ E+P +V
Sbjct: 11 ELEAIVAGAHAAGERVRVVGSALSPNGTGLCADGMVSLALCDKVLAVDEKRKRVTVEAGCRVRELVEALRPYGLTLENYASIAEQQVGGFVSVGAHGTGAAVPPVDEQVVSLKLVTPARGTLELSAEGADAGLFRLARVAMGTLGAISEVTLQLVDAHRLHEVTYVATRERVRREHEATLKRFKHVRYMWLPYTDDVVVVGSNPVKKGAELPDCKV 226 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49579.12154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49579.12154.1 >prot_H-elongata_contig49579.12154.1 ID=prot_H-elongata_contig49579.12154.1|Name=mRNA_H-elongata_contig49579.12154.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=189bp MLSLGHCDRILRVDQEKKTVTFEAGARVQQVVDELVPHGLTLQNYASINEback to top mRNA from alignment at H-elongata_contig49579:1815..3747+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49579.12154.1 ID=mRNA_H-elongata_contig49579.12154.1|Name=mRNA_H-elongata_contig49579.12154.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1933bp|location=Sequence derived from alignment at H-elongata_contig49579:1815..3747+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49579:1815..3747+ >mRNA_H-elongata_contig49579.12154.1 ID=mRNA_H-elongata_contig49579.12154.1|Name=mRNA_H-elongata_contig49579.12154.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1134bp|location=Sequence derived from alignment at H-elongata_contig49579:1815..3747+ (Himanthalia elongata Himel1 dioecious)back to top |