mRNA_H-elongata_contig49555.12148.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: D7FNF9_ECTSI (Similar to follicular lymphoma variant translocation 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF9_ECTSI) HSP 1 Score: 140 bits (352), Expect = 2.510e-40 Identity = 69/99 (69.70%), Postives = 83/99 (83.84%), Query Frame = 1
Query: 70 LQMEAYGIGVSVAYPPDTDTPGYARESVGKPETTHLI-EKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQVQKVNV 363
++++AYGIGV+VAYPPDTDTPG+ RE+VGKPE T LI E GG+FSP QVAA +V+GLKAGDFCIT+G EGYLVGL TAGF+PCFSVS ++ QV V
Sbjct: 1 MEVKAYGIGVAVAYPPDTDTPGFERENVGKPEVTRLIGEDAGGLFSPTQVAATMVKGLKAGDFCITLGGEGYLVGLATAGFAPCFSVSRALCQVLSAGV 99
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: A0A7S2RM03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM03_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.940e-33 Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQV 348
Q+G+YG+T YAASKFA+VG AQ+LQME +GI VSVAYPPDT TPGY E++ KPE + LI G+F P QVA IV GL+ GDF I G++G+++ TAG SP SV + I QV
Sbjct: 185 QLGVYGFTAYAASKFAVVGFAQSLQMEVKPFGIQVSVAYPPDTATPGYQEENLSKPEASRLISNTSGLFQPQQVACHIVNGLEHGDFSIWTGLDGWMLATLTAGMSPATSVVDVIAQV 302
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: A0A2B4SHQ7_STYPI (3-ketodihydrosphingosine reductase n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SHQ7_STYPI) HSP 1 Score: 117 bits (294), Expect = 1.790e-29 Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQV 348
Q GI+G+T Y+ SKFA+ G A+ L ME Y I VSVA+PPDTDTPG+ E+ KPE THLI GG+F+P QVA+ IV G+K F I+ G +GY+V TAG +P S+ E + QV
Sbjct: 175 QFGIFGFTAYSPSKFAVRGFAETLFMEVKPYNIAVSVAFPPDTDTPGFENENKNKPEETHLISSSGGLFTPEQVASNIVIGIKDRRFIISCGFDGYVVSTLTAGLAPISSLMELLTQV 292
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: A0A8J1UR32_OWEFU (Ofus.G18826 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UR32_OWEFU) HSP 1 Score: 117 bits (293), Expect = 2.250e-29 Identity = 59/123 (47.97%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQVQKVNV 363
QIG++GYT YA+SKFAL G+AQ+L ME Y + VSV YPPDTDTPG A E++ KPE T LI + G++ P QVA I++G K F I++G++G ++ AG SP +S+++ QV + +
Sbjct: 177 QIGLFGYTAYASSKFALNGLAQSLHMEMKPYNVMVSVVYPPDTDTPGLAAENISKPEETKLISEAAGVYQPEQVAQTIIEGAKKRKFNISLGIDGLMLTSVNAGMSPVTHLSDAVIQVLSMGI 299
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: UPI00077A271A (3-ketodihydrosphingosine reductase-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A271A) HSP 1 Score: 117 bits (293), Expect = 2.760e-29 Identity = 66/131 (50.38%), Postives = 84/131 (64.12%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQVQKVNVRVSVFVAL 387
QIGI+G+T YA SKFAL G A+AL ME Y I VSV +PPDTDTPG+ E+ KP+ TH I G+FSP QVA+ IV G+K F IT G++G++V T+G P SV E + +V + VF AL
Sbjct: 175 QIGIFGFTAYAPSKFALRGFAEALFMEVKPYNIAVSVVFPPDTDTPGFENENKNKPDETHEISSSAGLFSPEQVASNIVSGIKDRKFLITCGLDGFVVKTLTSGVCPPSSVLELLAEVVLLGFLCLVFAAL 305
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: A0A7S2DG25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DG25_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.960e-29 Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQV 348
Q+G++G++ Y+ +KFA+VG+AQ L ME + I V+VAYPPDTDTPG+ E+ GKPE T LI + G+F P QVAA IV GL+ G F G++G+L+ TAG PC S+ E I QV
Sbjct: 222 QLGVFGFSAYSPTKFAIVGLAQVLSMELKPHDIHVTVAYPPDTDTPGFKEENKGKPEETCLISETSGLFQPDQVAADIVSGLQRGAFTAYTGLDGWLLAHLTAGMGPCSSLFEGIAQV 339
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: A0A6S7JR19_PARCT (3-ketodihydrosphingosine reductase (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JR19_PARCT) HSP 1 Score: 115 bits (288), Expect = 6.470e-29 Identity = 59/117 (50.43%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQ 345
Q+GI+GY Y+ASKFAL G+A+ L ME YGIGVSVA+PPDT+TPG+ E+ KPE T L+ G+FSP+ VA I+ G++ G + I+ G++GYL+ + T G SP S E + Q
Sbjct: 172 QLGIFGYAGYSASKFALRGLAETLLMEVRPYGIGVSVAFPPDTETPGFKEENKDKPEETRLVSASAGVFSPSTVAKDILDGVQGGKYLISSGMDGYLLNMLTCGASPASSRLELLMQ 288
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: UPI0009E64BE5 (3-ketodihydrosphingosine reductase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E64BE5) HSP 1 Score: 115 bits (289), Expect = 9.760e-29 Identity = 59/118 (50.00%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQV 348
Q G++G+T Y+ SKFA+ G A+ L ME Y + VSV +PPDTDTPG+ E+ KPE THLI GG+F+P QVAA IV G+K F I+ G +G++V L T+G +P S+ E QV
Sbjct: 175 QFGLFGFTAYSPSKFAVRGFAETLFMEVKPYNVAVSVVFPPDTDTPGFENENKNKPEETHLISSAGGLFTPEQVAANIVMGIKERKFLISCGFDGFVVSLLTSGVAPVSSLFELFTQV 292
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: UPI00106D7BEF (3-ketodihydrosphingosine reductase-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D7BEF) HSP 1 Score: 115 bits (288), Expect = 1.440e-28 Identity = 60/117 (51.28%), Postives = 82/117 (70.09%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQ 345
Q+GI+GYT Y+ASKFAL G+A++L ME +GIGVS+A+PPDTDTPG+ E+ KPE T LI G+FSP+ VA I+ G+++G F I G++G+ + + T G SP S E I Q
Sbjct: 172 QLGIFGYTGYSASKFALRGLAESLLMEVRPHGIGVSIAFPPDTDTPGFEEENKDKPEETQLISASAGVFSPSLVAKDILNGVQSGKFLIASGMDGHFLNMLTCGASPASSRLELIIQ 288
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Match: UPI0003F0EC84 (3-ketodihydrosphingosine reductase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0EC84) HSP 1 Score: 114 bits (285), Expect = 2.570e-28 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 1 QIGIYGYTLYAASKFALVGMAQALQMEA--YGIGVSVAYPPDTDTPGYARESVGKPETTHLIEKGGGMFSPAQVAAKIVQGLKAGDFCITVGVEGYLVGLGTAGFSPCFSVSESIFQV 348
QIG+YGYT Y ASKFAL G A+ALQME Y I ++V++PPDTDTPG+ E++ KP+ T LI + G+F P VA I+ G F +GV+GY++ T GFSP S+ E + QV
Sbjct: 155 QIGLYGYTAYCASKFALRGFAEALQMEVKPYDIYITVSFPPDTDTPGFQAENISKPKETTLISETAGLFQPEDVAKVIINDASLGRFLSYIGVDGYMLSNVTCGFSPVTSMMEGVQQV 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49555.12148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49555.12148.1 >prot_H-elongata_contig49555.12148.1 ID=prot_H-elongata_contig49555.12148.1|Name=mRNA_H-elongata_contig49555.12148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=129bp QIGIYGYTLYAASKFALVGMAQALQMEAYGIGVSVAYPPDTDTPGYARESback to top mRNA from alignment at H-elongata_contig49555:286..1465+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49555.12148.1 ID=mRNA_H-elongata_contig49555.12148.1|Name=mRNA_H-elongata_contig49555.12148.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1180bp|location=Sequence derived from alignment at H-elongata_contig49555:286..1465+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49555:286..1465+ >mRNA_H-elongata_contig49555.12148.1 ID=mRNA_H-elongata_contig49555.12148.1|Name=mRNA_H-elongata_contig49555.12148.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at H-elongata_contig49555:286..1465+ (Himanthalia elongata Himel1 dioecious)back to top |