mRNA_H-elongata_contig48716.12036.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: D8LL15_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL15_ECTSI) HSP 1 Score: 369 bits (946), Expect = 1.300e-123 Identity = 181/241 (75.10%), Postives = 206/241 (85.48%), Query Frame = 1
Query: 1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGS-KYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
RERKG VEDLYETIS + KGSVG++SKV+HRQTGVEYALKTIQL KIS ++KEM+NEI ILKRLDHPNIIRAIETFE+DK +Y++M+LCTGGDL R PY+E AV IITKL+SATWYMH GIVHRDLKLENVVYES DSDI+IIDYGLSKII+ RM E+VGTLYTMAPEVL G YD SCDMWS+GV+A+VLLSGDMPFD TKQRL+KAVEDGR+ FSGRRW+ ++ EAR
Sbjct: 24 RERKGTKVEDLYETISVIGKGSVGMISKVKHRQTGVEYALKTIQLEKISRSMLKEMRNEIEILKRLDHPNIIRAIETFESDKEVYLVMRLCTGGDLHRRAPYAESAVVDIITKLLSATWYMHQQGIVHRDLKLENVVYESTLPDSDIFIIDYGLSKIIERDEDRMNEVVGTLYTMAPEVLNGGVSYDKSCDMWSIGVIAFVLLSGDMPFDTTTKQRLIKAVEDGRFEFSGRRWNRVSSEAR 264
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S0TAB9_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAB9_9STRA) HSP 1 Score: 224 bits (571), Expect = 4.890e-67 Identity = 108/233 (46.35%), Postives = 161/233 (69.10%), Query Frame = 1
Query: 1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKI--IDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGR 690
R+R G N+E+ YE + + +GS+G V + RHR+TG YALKTI+ ++S +V E+ NEI IL LDHPNI+R +E F + ++ IM LC+GGDL R PYSE ARI+ +V A YMH +VHRD+K ENV++ S+A++S++ +ID+GL+K + + ++ E VGTLY+MAPEV++G+ YD CD+WSLGV+ Y+LL+G MPF +++ ++ +E RY + R
Sbjct: 35 RQRLGANIEEYYEILGTIGRGSIGNVCRCRHRETGRIYALKTIKTSRMSKEMVDELMNEIDILMGLDHPNIVRPLELFSRRREIFFIMPLCSGGDLYKRAPYSENDAARIVCMMVDAIDYMHQHNVVHRDIKFENVLFVSKAYESEVMVIDFGLAKANYMVKKEGKLDEFVGTLYSMAPEVIRGA-YDEKCDIWSLGVVTYMLLAGAMPFTRFDDERKFLRDLEGQRYDLNRR 266
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S3K0F3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0F3_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.410e-65 Identity = 109/233 (46.78%), Postives = 158/233 (67.81%), Query Frame = 1
Query: 1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDT--RSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGR 690
R+R G++VE Y+ + + +GS+G V + RHR++G YALKTI+ ++S +V E+ NE+ IL LDHPNI++ IE F + +Y IM LCTGGDL R PY+E ARI+ + YMH +VHRD+K ENV++ S+A+D++I +ID+GLSK T R ++ E VGTLY+MAPEV++GS YD CD+WSLGV+ Y+LL+G MPF +++ ++ +E RY R
Sbjct: 29 RQRVGQDVEKYYDILGTIGRGSIGNVCRCRHRESGRVYALKTIKTSRMSKEMVDELMNEVEILMSLDHPNIVKPIELFSRRREIYFIMVLCTGGDLYKRAPYTENEAARIVAMVTDVIDYMHAYKVVHRDIKFENVLFFSKAYDAEIMVIDFGLSKANYTVKREGKLDEFVGTLYSMAPEVIRGS-YDEKCDVWSLGVITYMLLAGAMPFTRFDDERKFLRDLEAQRYDMHRR 260
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S1FQ62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ62_9STRA) HSP 1 Score: 210 bits (535), Expect = 8.190e-64 Identity = 111/240 (46.25%), Postives = 159/240 (66.25%), Query Frame = 1
Query: 10 KGENVEDLYETISPVAKGSVGLVSKVRHRQT--GVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCG-TKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
KG + E Y IS + +GS+G + +VR R++ G EYALKT+ L+ EM+NEI+++K LDHPNIIRA ETFE K + +I +LCTG DL SR PY EK ARI++K++SA Y+H+ IVHRD+KLEN+++ES +SDI +ID+GL+K I ++ + + GT YTMAPEVL + Y + D+WS+GV AY ++SG +P +K+RL + F G +WD I+ A+
Sbjct: 35 KGRSFEKKYSLISVIGEGSMGTIYRVRRRKSLCGQEYALKTLSKSVTCEVLIDEMKNEISLIKELDHPNIIRAYETFEGGKILGVITELCTGKDLHSRLPYQEKETARIVSKILSAVQYLHSKNIVHRDIKLENIMFESSRPNSDIKLIDFGLAKKILNKNQYLSDYAGTEYTMAPEVLTKA-YTTKVDLWSVGVTAYTMMSGKIPSPKKFSKERL-------EHVFKGEKWDDISGSAK 266
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S4A800_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A800_9STRA) HSP 1 Score: 209 bits (532), Expect = 2.280e-61 Identity = 97/229 (42.36%), Postives = 157/229 (68.56%), Query Frame = 1
Query: 7 RKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGR 690
++ ++ Y+ + + +GS+G V++ +H+++ YA+KT+Q K+S ++EM NEIAI+ LDHPNI+R +E F+ + +Y I+ C+GGDL R PY+E +R I ++ A YMH G+VHRDLK ENV+++S+A +S++ +ID+GL+K R R+ + VGTLY+MAPEVL+GS YD+ CD+WS+GV++Y++L+ MPF ++ L++ +E RY R
Sbjct: 31 QRDTDIAQFYDIDATIGRGSIGTVARAKHKESSKWYAVKTLQTSKMSKDALEEMMNEIAIMMGLDHPNIVRPLELFQKKREIYFIIPYCSGGDLYKRAPYTEHHASRYIAQVCDAVAYMHKFGVVHRDLKFENVLFQSKAPESEVVVIDFGLAKAKVARDKRLHDFVGTLYSMAPEVLRGS-YDAKCDVWSIGVISYMMLASAMPFTRFDDEELLLRDLEAERYDMRRR 258
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S3DWP8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWP8_9STRA) HSP 1 Score: 203 bits (516), Expect = 4.300e-60 Identity = 99/203 (48.77%), Postives = 147/203 (72.41%), Query Frame = 1
Query: 115 ALKTIQLGKIS-PRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
A+K+I L +++ P V E++NEIAILK+LDHP+I++A+ET+E ++I+M+LC GGDL SR PY+E ARI+T +VSA YMH+ I HRDLK EN+++ ++ S++ +ID+GLS T + M E VGT+YTMAPEVLKG KY D+WS+GV+A++LLS MPF ++ +V+ + G+Y F GRRW ++++A+
Sbjct: 41 AMKSIHLSRVTDPTFVLELKNEIAILKKLDHPHIVKAMETYEHRNQIFIVMELCHGGDLYSRDPYTEAEAARIVTSVVSAIAYMHSKNICHRDLKYENIMFANDDPKSEVKVIDFGLSMKFGT-NKEMTEGVGTIYTMAPEVLKG-KYTKQADLWSIGVIAFMLLSSQMPFYGRKRRHIVEQIMKGKYEFKGRRWKRVSEQAK 241
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: F0XWL9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWL9_AURAN) HSP 1 Score: 201 bits (511), Expect = 1.140e-58 Identity = 92/239 (38.49%), Postives = 158/239 (66.11%), Query Frame = 1
Query: 7 RKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
++ E++ Y+ + + +GS+G V++ +H+++ YA+KT+Q +++ ++ EM NEI I+ LDHPNI+R +E + + +Y ++ C+GGDL R PY E+ R + ++ A YMH +VHRDLK ENV++ S+A +S++ IID+GL+K R ++ E VGT+Y+MAPEV++G+ YD+ CD+WSLG++ Y+LL+G MPF + L++ +E RY + R +++A+
Sbjct: 5 QREEDIGQYYDIEATIGRGSIGTVARAQHKESKKWYAVKTLQTQRLTKDMIDEMLNEIDIMMGLDHPNIVRPLELYSKKRELYFVIPFCSGGDLYKRAPYGERNAGRYVAQMCDAVAYMHRFNVVHRDLKFENVLFMSKAPESEVMIIDFGLAKANYARKKKLDEFVGTIYSMAPEVIRGA-YDAKCDVWSLGIITYMLLAGAMPFTRFDDEDALLRDLERERYDMTRRTMAKRSEDAK 242
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S4N7F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7F1_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.610e-57 Identity = 94/203 (46.31%), Postives = 143/203 (70.44%), Query Frame = 1
Query: 112 YALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
YALKTIQL +I+ ++E++NEI IL+ LDHPNI++A E FE + +YI+M+ C GGDL +R PYSEK A+I+ K++SA YMH + HRDLK EN+++E++ +++I +ID+GLSK + +M E VGT+YTMAP+VL+G Y S D+WS+GV+AY+LLS PF ++ ++ + + F G W ++++EA+
Sbjct: 99 YALKTIQLNRITDEFIEELRNEIDILRTLDHPNIVKAFEVFENKRQIYIVMESCDGGDLYARNPYSEKETAKIVGKVLSAVAYMHATNVCHRDLKFENIMFENKKKNAEIKVIDFGLSKKFIS-GKKMSEGVGTIYTMAPQVLQGV-YTSQADLWSIGVIAYMLLSSSKPFYARKRRYMIDKIMRCDFKFHGPGWKHVSEEAK 299
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S2PT52_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PT52_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.440e-57 Identity = 109/244 (44.67%), Postives = 159/244 (65.16%), Query Frame = 1
Query: 28 DLYETISPVAKGSVGLVSKVRHRQTGVE-----YALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLS-GDMPFDCGTKQ-------RLVKAVEDGRYSFSGRRWDYITKEAR 720
+ YE +S + KGS G KV+ R + Y +K IQ+ +++ ++E++NEI ILK LDHPNIIR ETFE K I+M+L +GGDL +R PY E A II KL+SA YMHN+GI HRD+KLEN+++E + S+I +ID+G SK RS + E +G++YT+APEV+KG Y D+WS+GV+A++LLS G+MPF G ++ ++VK + G ++F G W I++EA+
Sbjct: 34 EKYEIVSTLGKGSTGAAYKVKTRSKNGDVRSKYYCMKEIQIERLTDESMEELKNEIEILKELDHPNIIRPHETFEWKKKFVIVMELASGGDLYTRFPYIEDQAAMIIGKLLSAITYMHNSGITHRDIKLENIIFEDNS-SSEIKLIDFGFSKKF-VRSKYLHERLGSVYTVAPEVVKGL-YTEKADLWSVGVLAFMLLSNGEMPFAQGNRESRKFSRKQMVKNILRGTFNFEGPAWKDISQEAK 274
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S3XSE4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSE4_HETAK) HSP 1 Score: 199 bits (506), Expect = 3.610e-57 Identity = 101/240 (42.08%), Postives = 156/240 (65.00%), Query Frame = 1
Query: 1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
R R +V YE + +GS+G + V+ + G YALKTIQL +ISP + E++NEI +L+ LDHPNIIR +E F+ + + +I++LC GGDL +R PY+E+ I +L SA Y H G+VHRDLK EN+++ S++ ++ I +ID+GLS +K VGTLY+MAPEV++G+ D + D WS+GV+A++LLS MPF ++ ++ ++ Y+F G RW +++EA+
Sbjct: 41 RARHDGDVSKHYENDRLLGEGSMGTIRAVKKKSNGQMYALKTIQLSRISPAFLAELRNEIDLLRSLDHPNIIRPLEVFDTKRRINLILELCAGGDLYTRHPYTEEEACSIALQLTSAIAYCHANGVVHRDLKFENIMFASKSKEAKIKVIDFGLSSKY-APGHVLKGSVGTLYSMAPEVIEGAS-DEASDNWSIGVIAFMLLSSQMPFFGKDERTVIMKIQACAYAFRGPRWKGVSEEAK 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48716.12036.1 >prot_H-elongata_contig48716.12036.1 ID=prot_H-elongata_contig48716.12036.1|Name=mRNA_H-elongata_contig48716.12036.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPback to top mRNA from alignment at H-elongata_contig48716:575..3664+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48716.12036.1 ID=mRNA_H-elongata_contig48716.12036.1|Name=mRNA_H-elongata_contig48716.12036.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3090bp|location=Sequence derived from alignment at H-elongata_contig48716:575..3664+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48716:575..3664+ >mRNA_H-elongata_contig48716.12036.1 ID=mRNA_H-elongata_contig48716.12036.1|Name=mRNA_H-elongata_contig48716.12036.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at H-elongata_contig48716:575..3664+ (Himanthalia elongata Himel1 dioecious)back to top |