mRNA_H-elongata_contig48716.12036.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig48716.12036.1
Unique NamemRNA_H-elongata_contig48716.12036.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: D8LL15_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL15_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.300e-123
Identity = 181/241 (75.10%), Postives = 206/241 (85.48%), Query Frame = 1
Query:    1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGS-KYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
            RERKG  VEDLYETIS + KGSVG++SKV+HRQTGVEYALKTIQL KIS  ++KEM+NEI ILKRLDHPNIIRAIETFE+DK +Y++M+LCTGGDL  R PY+E AV  IITKL+SATWYMH  GIVHRDLKLENVVYES   DSDI+IIDYGLSKII+    RM E+VGTLYTMAPEVL G   YD SCDMWS+GV+A+VLLSGDMPFD  TKQRL+KAVEDGR+ FSGRRW+ ++ EAR
Sbjct:   24 RERKGTKVEDLYETISVIGKGSVGMISKVKHRQTGVEYALKTIQLEKISRSMLKEMRNEIEILKRLDHPNIIRAIETFESDKEVYLVMRLCTGGDLHRRAPYAESAVVDIITKLLSATWYMHQQGIVHRDLKLENVVYESTLPDSDIFIIDYGLSKIIERDEDRMNEVVGTLYTMAPEVLNGGVSYDKSCDMWSIGVIAFVLLSGDMPFDTTTKQRLIKAVEDGRFEFSGRRWNRVSSEAR 264          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S0TAB9_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAB9_9STRA)

HSP 1 Score: 224 bits (571), Expect = 4.890e-67
Identity = 108/233 (46.35%), Postives = 161/233 (69.10%), Query Frame = 1
Query:    1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKI--IDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGR 690
            R+R G N+E+ YE +  + +GS+G V + RHR+TG  YALKTI+  ++S  +V E+ NEI IL  LDHPNI+R +E F   + ++ IM LC+GGDL  R PYSE   ARI+  +V A  YMH   +VHRD+K ENV++ S+A++S++ +ID+GL+K   +  +  ++ E VGTLY+MAPEV++G+ YD  CD+WSLGV+ Y+LL+G MPF     +++ ++ +E  RY  + R
Sbjct:   35 RQRLGANIEEYYEILGTIGRGSIGNVCRCRHRETGRIYALKTIKTSRMSKEMVDELMNEIDILMGLDHPNIVRPLELFSRRREIFFIMPLCSGGDLYKRAPYSENDAARIVCMMVDAIDYMHQHNVVHRDIKFENVLFVSKAYESEVMVIDFGLAKANYMVKKEGKLDEFVGTLYSMAPEVIRGA-YDEKCDIWSLGVVTYMLLAGAMPFTRFDDERKFLRDLEGQRYDLNRR 266          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S3K0F3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0F3_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.410e-65
Identity = 109/233 (46.78%), Postives = 158/233 (67.81%), Query Frame = 1
Query:    1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDT--RSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGR 690
            R+R G++VE  Y+ +  + +GS+G V + RHR++G  YALKTI+  ++S  +V E+ NE+ IL  LDHPNI++ IE F   + +Y IM LCTGGDL  R PY+E   ARI+  +     YMH   +VHRD+K ENV++ S+A+D++I +ID+GLSK   T  R  ++ E VGTLY+MAPEV++GS YD  CD+WSLGV+ Y+LL+G MPF     +++ ++ +E  RY    R
Sbjct:   29 RQRVGQDVEKYYDILGTIGRGSIGNVCRCRHRESGRVYALKTIKTSRMSKEMVDELMNEVEILMSLDHPNIVKPIELFSRRREIYFIMVLCTGGDLYKRAPYTENEAARIVAMVTDVIDYMHAYKVVHRDIKFENVLFFSKAYDAEIMVIDFGLSKANYTVKREGKLDEFVGTLYSMAPEVIRGS-YDEKCDVWSLGVITYMLLAGAMPFTRFDDERKFLRDLEAQRYDMHRR 260          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S1FQ62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ62_9STRA)

HSP 1 Score: 210 bits (535), Expect = 8.190e-64
Identity = 111/240 (46.25%), Postives = 159/240 (66.25%), Query Frame = 1
Query:   10 KGENVEDLYETISPVAKGSVGLVSKVRHRQT--GVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCG-TKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
            KG + E  Y  IS + +GS+G + +VR R++  G EYALKT+        L+ EM+NEI+++K LDHPNIIRA ETFE  K + +I +LCTG DL SR PY EK  ARI++K++SA  Y+H+  IVHRD+KLEN+++ES   +SDI +ID+GL+K I  ++  + +  GT YTMAPEVL  + Y +  D+WS+GV AY ++SG +P     +K+RL        + F G +WD I+  A+
Sbjct:   35 KGRSFEKKYSLISVIGEGSMGTIYRVRRRKSLCGQEYALKTLSKSVTCEVLIDEMKNEISLIKELDHPNIIRAYETFEGGKILGVITELCTGKDLHSRLPYQEKETARIVSKILSAVQYLHSKNIVHRDIKLENIMFESSRPNSDIKLIDFGLAKKILNKNQYLSDYAGTEYTMAPEVLTKA-YTTKVDLWSVGVTAYTMMSGKIPSPKKFSKERL-------EHVFKGEKWDDISGSAK 266          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S4A800_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A800_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.280e-61
Identity = 97/229 (42.36%), Postives = 157/229 (68.56%), Query Frame = 1
Query:    7 RKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGR 690
            ++  ++   Y+  + + +GS+G V++ +H+++   YA+KT+Q  K+S   ++EM NEIAI+  LDHPNI+R +E F+  + +Y I+  C+GGDL  R PY+E   +R I ++  A  YMH  G+VHRDLK ENV+++S+A +S++ +ID+GL+K    R  R+ + VGTLY+MAPEVL+GS YD+ CD+WS+GV++Y++L+  MPF     ++ L++ +E  RY    R
Sbjct:   31 QRDTDIAQFYDIDATIGRGSIGTVARAKHKESSKWYAVKTLQTSKMSKDALEEMMNEIAIMMGLDHPNIVRPLELFQKKREIYFIIPYCSGGDLYKRAPYTEHHASRYIAQVCDAVAYMHKFGVVHRDLKFENVLFQSKAPESEVVVIDFGLAKAKVARDKRLHDFVGTLYSMAPEVLRGS-YDAKCDVWSIGVISYMMLASAMPFTRFDDEELLLRDLEAERYDMRRR 258          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S3DWP8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWP8_9STRA)

HSP 1 Score: 203 bits (516), Expect = 4.300e-60
Identity = 99/203 (48.77%), Postives = 147/203 (72.41%), Query Frame = 1
Query:  115 ALKTIQLGKIS-PRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
            A+K+I L +++ P  V E++NEIAILK+LDHP+I++A+ET+E    ++I+M+LC GGDL SR PY+E   ARI+T +VSA  YMH+  I HRDLK EN+++ ++   S++ +ID+GLS    T +  M E VGT+YTMAPEVLKG KY    D+WS+GV+A++LLS  MPF    ++ +V+ +  G+Y F GRRW  ++++A+
Sbjct:   41 AMKSIHLSRVTDPTFVLELKNEIAILKKLDHPHIVKAMETYEHRNQIFIVMELCHGGDLYSRDPYTEAEAARIVTSVVSAIAYMHSKNICHRDLKYENIMFANDDPKSEVKVIDFGLSMKFGT-NKEMTEGVGTIYTMAPEVLKG-KYTKQADLWSIGVIAFMLLSSQMPFYGRKRRHIVEQIMKGKYEFKGRRWKRVSEQAK 241          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: F0XWL9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWL9_AURAN)

HSP 1 Score: 201 bits (511), Expect = 1.140e-58
Identity = 92/239 (38.49%), Postives = 158/239 (66.11%), Query Frame = 1
Query:    7 RKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFD-CGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
            ++ E++   Y+  + + +GS+G V++ +H+++   YA+KT+Q  +++  ++ EM NEI I+  LDHPNI+R +E +   + +Y ++  C+GGDL  R PY E+   R + ++  A  YMH   +VHRDLK ENV++ S+A +S++ IID+GL+K    R  ++ E VGT+Y+MAPEV++G+ YD+ CD+WSLG++ Y+LL+G MPF     +  L++ +E  RY  + R     +++A+
Sbjct:    5 QREEDIGQYYDIEATIGRGSIGTVARAQHKESKKWYAVKTLQTQRLTKDMIDEMLNEIDIMMGLDHPNIVRPLELYSKKRELYFVIPFCSGGDLYKRAPYGERNAGRYVAQMCDAVAYMHRFNVVHRDLKFENVLFMSKAPESEVMIIDFGLAKANYARKKKLDEFVGTIYSMAPEVIRGA-YDAKCDVWSLGIITYMLLAGAMPFTRFDDEDALLRDLERERYDMTRRTMAKRSEDAK 242          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S4N7F1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7F1_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.610e-57
Identity = 94/203 (46.31%), Postives = 143/203 (70.44%), Query Frame = 1
Query:  112 YALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
            YALKTIQL +I+   ++E++NEI IL+ LDHPNI++A E FE  + +YI+M+ C GGDL +R PYSEK  A+I+ K++SA  YMH   + HRDLK EN+++E++  +++I +ID+GLSK   +   +M E VGT+YTMAP+VL+G  Y S  D+WS+GV+AY+LLS   PF    ++ ++  +    + F G  W ++++EA+
Sbjct:   99 YALKTIQLNRITDEFIEELRNEIDILRTLDHPNIVKAFEVFENKRQIYIVMESCDGGDLYARNPYSEKETAKIVGKVLSAVAYMHATNVCHRDLKFENIMFENKKKNAEIKVIDFGLSKKFIS-GKKMSEGVGTIYTMAPQVLQGV-YTSQADLWSIGVIAYMLLSSSKPFYARKRRYMIDKIMRCDFKFHGPGWKHVSEEAK 299          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S2PT52_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PT52_9STRA)

HSP 1 Score: 199 bits (505), Expect = 2.440e-57
Identity = 109/244 (44.67%), Postives = 159/244 (65.16%), Query Frame = 1
Query:   28 DLYETISPVAKGSVGLVSKVRHRQTGVE-----YALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLS-GDMPFDCGTKQ-------RLVKAVEDGRYSFSGRRWDYITKEAR 720
            + YE +S + KGS G   KV+ R    +     Y +K IQ+ +++   ++E++NEI ILK LDHPNIIR  ETFE  K   I+M+L +GGDL +R PY E   A II KL+SA  YMHN+GI HRD+KLEN+++E  +  S+I +ID+G SK    RS  + E +G++YT+APEV+KG  Y    D+WS+GV+A++LLS G+MPF  G ++       ++VK +  G ++F G  W  I++EA+
Sbjct:   34 EKYEIVSTLGKGSTGAAYKVKTRSKNGDVRSKYYCMKEIQIERLTDESMEELKNEIEILKELDHPNIIRPHETFEWKKKFVIVMELASGGDLYTRFPYIEDQAAMIIGKLLSAITYMHNSGITHRDIKLENIIFEDNS-SSEIKLIDFGFSKKF-VRSKYLHERLGSVYTVAPEVVKGL-YTEKADLWSVGVLAFMLLSNGEMPFAQGNRESRKFSRKQMVKNILRGTFNFEGPAWKDISQEAK 274          
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Match: A0A7S3XSE4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSE4_HETAK)

HSP 1 Score: 199 bits (506), Expect = 3.610e-57
Identity = 101/240 (42.08%), Postives = 156/240 (65.00%), Query Frame = 1
Query:    1 RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISPRLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRTPYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYIIDYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYVLLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR 720
            R R   +V   YE    + +GS+G +  V+ +  G  YALKTIQL +ISP  + E++NEI +L+ LDHPNIIR +E F+  + + +I++LC GGDL +R PY+E+    I  +L SA  Y H  G+VHRDLK EN+++ S++ ++ I +ID+GLS         +K  VGTLY+MAPEV++G+  D + D WS+GV+A++LLS  MPF    ++ ++  ++   Y+F G RW  +++EA+
Sbjct:   41 RARHDGDVSKHYENDRLLGEGSMGTIRAVKKKSNGQMYALKTIQLSRISPAFLAELRNEIDLLRSLDHPNIIRPLEVFDTKRRINLILELCAGGDLYTRHPYTEEEACSIALQLTSAIAYCHANGVVHRDLKFENIMFASKSKEAKIKVIDFGLSSKY-APGHVLKGSVGTLYSMAPEVIEGAS-DEASDNWSIGVIAFMLLSSQMPFFGKDERTVIMKIQACAYAFRGPRWKGVSEEAK 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48716.12036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL15_ECTSI1.300e-12375.10N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL15_ECT... [more]
A0A7S0TAB9_9STRA4.890e-6746.35Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]
A0A7S3K0F3_9STRA2.410e-6546.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1FQ62_9STRA8.190e-6446.25Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S4A800_9STRA2.280e-6142.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3DWP8_9STRA4.300e-6048.77Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
F0XWL9_AURAN1.140e-5838.49Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4N7F1_9STRA1.610e-5746.31Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2PT52_9STRA2.440e-5744.67Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3XSE4_HETAK3.610e-5742.08Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48716contigH-elongata_contig48716:575..3664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.2
Seed ortholog evalue7.5e-100
Seed eggNOG ortholog2880.D8LL15
Preferred nameCDPK1
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons5
Model size723
Cds size723
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48716.12036.1prot_H-elongata_contig48716.12036.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig48716 575..3664 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930802.2211382-CDS-H-elongata_contig48716:574..6411622930802.2211382-CDS-H-elongata_contig48716:574..641Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 575..641 +
1691679576.4316056-CDS-H-elongata_contig48716:574..6411691679576.4316056-CDS-H-elongata_contig48716:574..641Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 575..641 +
1622930802.239159-CDS-H-elongata_contig48716:1472..16221622930802.239159-CDS-H-elongata_contig48716:1472..1622Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 1473..1622 +
1691679576.4424572-CDS-H-elongata_contig48716:1472..16221691679576.4424572-CDS-H-elongata_contig48716:1472..1622Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 1473..1622 +
1622930802.255431-CDS-H-elongata_contig48716:2073..21951622930802.255431-CDS-H-elongata_contig48716:2073..2195Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 2074..2195 +
1691679576.4507651-CDS-H-elongata_contig48716:2073..21951691679576.4507651-CDS-H-elongata_contig48716:2073..2195Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 2074..2195 +
1622930802.2707176-CDS-H-elongata_contig48716:2826..29551622930802.2707176-CDS-H-elongata_contig48716:2826..2955Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 2827..2955 +
1691679576.4586563-CDS-H-elongata_contig48716:2826..29551691679576.4586563-CDS-H-elongata_contig48716:2826..2955Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 2827..2955 +
1622930802.2860775-CDS-H-elongata_contig48716:3409..36641622930802.2860775-CDS-H-elongata_contig48716:3409..3664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 3410..3664 +
1691679576.466946-CDS-H-elongata_contig48716:3409..36641691679576.466946-CDS-H-elongata_contig48716:3409..3664Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig48716 3410..3664 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig48716.12036.1

>prot_H-elongata_contig48716.12036.1 ID=prot_H-elongata_contig48716.12036.1|Name=mRNA_H-elongata_contig48716.12036.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=241bp
RERKGENVEDLYETISPVAKGSVGLVSKVRHRQTGVEYALKTIQLGKISP
RLVKEMQNEIAILKRLDHPNIIRAIETFEADKTMYIIMKLCTGGDLRSRT
PYSEKAVARIITKLVSATWYMHNAGIVHRDLKLENVVYESEAWDSDIYII
DYGLSKIIDTRSSRMKEMVGTLYTMAPEVLKGSKYDSSCDMWSLGVMAYV
LLSGDMPFDCGTKQRLVKAVEDGRYSFSGRRWDYITKEAR*
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mRNA from alignment at H-elongata_contig48716:575..3664+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig48716.12036.1 ID=mRNA_H-elongata_contig48716.12036.1|Name=mRNA_H-elongata_contig48716.12036.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3090bp|location=Sequence derived from alignment at H-elongata_contig48716:575..3664+ (Himanthalia elongata Himel1 dioecious)
AGGGAGAGGAAGGGCGAGAACGTGGAAGACTTGTACGAGACGATATCCCC TGTGGCGAAGGGTTCCGGTGAGCCCATCGTAGAGTTAGTTCCCGAAGCGT TGCGGCACTTTCCTTTCGAATAGCCCCAGCCCTCTCCGTTCATGTGAGCA AAGGCGCCTTCTTCTCTCCTCTTATCTCCTCAAGAAGGGATTTAACATTA TTATAGTATATTAGTGCTTTACACTGCAGATACCGGGAAAATATTATAGG GTTTCCACGTGTCACAAACAATGCATGAAAAACATGCACTAAAGTGAACA GGAACCTAAACTAGTCCGCCACTGTTCACTTTAGTGCATGTTTTTCGTGC AGTGTTTATAGCACGTGGAAACCCTATATTTGTGCATGTTTTTCTTTATT TTCTTTTATTCTCTGTTAGGGTTTTTTGTTGTTTTTTTTCCTTTCAATAT CTAGGTTATAACATGCGGTAGAGACTACGAATTCAGCGGTGAAGAGGACG TTGTAGGGGTTTTTTTTCATGAAATTGTCATTCTGCTCTCTAAAGAGCAG CACACCTGCTACTGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGG CAATGGAATCAGGAGATGGGACAACTTCGCGCTGTATTTTTATTTTTAAA CATATGAACTCATCGCTGTATTTTGTTTCATGACGTGTCTAGCGCGTCAA AAACCATTGCTGCCCTGCTAAGATTGATAACAACATTAGTAACTTTTACC TCAAAGAATGTCCGCGGTACACCTCTTTGTTTGCCTCTCTGTGCACCTAC CTGTCTTGTCTATCTCTCTTTAATCTCTTGGATATCCCGTGCATGTACCG ACGCGCTGGTTTCGTCTCTTCGTCTGTGTGTGATCACTTCACGGGCAGTG GGGTTGGTTTCCAAGGTGAGGCATCGCCAGACGGGCGTGGAGTACGCCCT CAAGACCATCCAACTGGGGAAGATCTCGCCCCGCCTGGTCAAGGAGATGC AGAATGAGATCGCCATCCTAAAGCGACTGGATCACCCCAACATTATCCGT GAGAGTCATCCATGTCCACGGTATTACCGACGGTTCCCGTGAGAGTCATC CATGTCCATTCTCTTCCAACCGCTCTCGTTTTGATATAATTCAGCCCTTG CCAGCCTTCCTTTAAACAGGACACGAAAATAATAATATTAGTAAGAAAAA AATAGGACACGGTCAGGCCTATAAAAAAACAAGTTTGCCTTGTGTGGGAA TCTCTGAGGAGATGTACTTTTCTGTAACGCCCAAAGCGACAAGAGTTGCT CCCGGGGACAAAATCATGGAACCACTTTGTATGTGTGTTTCGTCCATATT ATACATCACGCGCCATGTAATATTATTATTGTTATTGTATTATTATTATT ATTATTATTATTATTGTTACTACTATTACCATATCTTAGTCCCTCTGTAG TCGCGCTGCTTCACGATTTGAATGTCCAATGCTATGATTCGAATGGCAGG GGCAATCGAGACTTTCGAGGCGGATAAGACTATGTACATTATCATGAAGC TCTGCACGGGGGGCGACCTCCGAAGCCGTACCCCCTATTCCGAGAAGGCC GTTGCCCGCATCATCACCAAGGTGCGGCGTAGGGGGCTTGAAATCGAGGA GAGTTGGATAAATCCCTTAAGGGCCGTGGGCGGGATGGGGTCATTGGGAA TGGGATGCTAAGCCTTGCACGTGGCATGGCCCAACTTACTAATGTGTCAT CAAATGTTAAAGTTTTGATTGCACGTCCGGGTGCAGCGGGAATGACAGCG AAGGGAATAGAATCGGAGCGGGTTCGAAAGCAAGACATGTATGGAGAGGG GGTCACCGGGTGGATGAGAGGGCGGAAGGACGAGAAGCCGTCGAATCGTT CGGTCGGTCACGCACGAGCGTTCACGGTATACTTTAACAATAACCGTAAG ACATGCAAGAACGAAAATGGCTGGGGAGGGGGGGGGGGGGGGGAGGGTGA TCCCGCCCCGTCACCGATTGCCAAAAAAGGTGGCGGGGGGGTCCCGGGGG CCAATTTTCCTTTTNNNNNNNNNNAAATAAAAAAAAACAAAAAAAAAGAA AAAAAAAAAAAAGAGGGAGGGGGGGGGGGCGGGGGGGGGGGGGGGGTACG CTGATCCCGCCCCGTCACCGATTGCCAACAAAGCTGACGCTGGGCTCCCG TGGGCATATGTTCCTTGTGTGTTGTCTCTTGTTTCTCATGGGACCGAGAC AGCTCGTATCCGCCACGTGGTACATGCACAACGCGGGCATCGTCCATCGA GACCTGAAGCTGGAGAACGTTGTGTATGAATCCGAGGCATGGGACTCGGA CATTTACATCATCGACTACGGCCTCTCAAAGGTGTGAAGGCGAGCGCGAT CGTGAACATGAACATGAAGGTGTTCCACCTATTATAGCTGCCGTGTACCC TTCCTAGAGGCAGTACGGTGTGACGAGGCCTACGTGTAATAGGAACGGGC GTGTCCAACATGAGGTGCTATCAGTAGAGTGATATACCTGCGCCACCTGA CTCCTCCCCAGCGCAAGCACATGGGAGTTCCACCTAATTTGAACAGTCCA ATTCATTCAAGAAATCATTATGGAACACGACTAATCTCATTCTTCGATTT TTTTGCTGGCATCTAGTAATATACATTCTCAAACCTGACGATATTTAATG TAATAAAGATAAGGTGGATGTTGTGAGGCTGTAATGGGTATTGGCCTGTA CGGCATGCACCGGTCAAACTTATCACCCTCCCAACCCTACCTGGGCGATG GCTTTTGTTTTTTTTTGTGTCGCGCACGGAGGAAGATAATTGACACGCGC TCGTCTCGGATGAAAGAGATGGTTGGTACCCTGTACACGATGGCCCCAGA GGTGCTGAAGGGGAGCAAGTACGACAGCTCGTGCGACATGTGGAGCCTCG GTGTCATGGCGTACGTCCTCCTGAGCGGGGACATGCCGTTCGACTGCGGC ACGAAGCAGCGCCTCGTAAAGGCGGTCGAGGACGGACGCTACAGCTTTTC GGGGAGGCGGTGGGACTACATCACCAAGGAGGCAAGGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig48716:575..3664+

>mRNA_H-elongata_contig48716.12036.1 ID=mRNA_H-elongata_contig48716.12036.1|Name=mRNA_H-elongata_contig48716.12036.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at H-elongata_contig48716:575..3664+ (Himanthalia elongata Himel1 dioecious)
AGGGAGAGGAAGGGCGAGAACGTGGAAGACTTGTACGAGACGATATCCCC
TGTGGCGAAGGGTTCCGAGGGAGAGGAAGGGCGAGAACGTGGAAGACTTG
TACGAGACGATATCCCCTGTGGCGAAGGGTTCCGTGGGGTTGGTTTCCAA
GGTGAGGCATCGCCAGACGGGCGTGGAGTACGCCCTCAAGACCATCCAAC
TGGGGAAGATCTCGCCCCGCCTGGTCAAGGAGATGCAGAATGAGATCGCC
ATCCTAAAGCGACTGGATCACCCCAACATTATCCTGGGGTTGGTTTCCAA
GGTGAGGCATCGCCAGACGGGCGTGGAGTACGCCCTCAAGACCATCCAAC
TGGGGAAGATCTCGCCCCGCCTGGTCAAGGAGATGCAGAATGAGATCGCC
ATCCTAAAGCGACTGGATCACCCCAACATTATCCGGGCAATCGAGACTTT
CGAGGCGGATAAGACTATGTACATTATCATGAAGCTCTGCACGGGGGGCG
ACCTCCGAAGCCGTACCCCCTATTCCGAGAAGGCCGTTGCCCGCATCATC
ACCAAGGGGCAATCGAGACTTTCGAGGCGGATAAGACTATGTACATTATC
ATGAAGCTCTGCACGGGGGGCGACCTCCGAAGCCGTACCCCCTATTCCGA
GAAGGCCGTTGCCCGCATCATCACCAAGCTCGTATCCGCCACGTGGTACA
TGCACAACGCGGGCATCGTCCATCGAGACCTGAAGCTGGAGAACGTTGTG
TATGAATCCGAGGCATGGGACTCGGACATTTACATCATCGACTACGGCCT
CTCAAAGCTCGTATCCGCCACGTGGTACATGCACAACGCGGGCATCGTCC
ATCGAGACCTGAAGCTGGAGAACGTTGTGTATGAATCCGAGGCATGGGAC
TCGGACATTTACATCATCGACTACGGCCTCTCAAAGATAATTGACACGCG
CTCGTCTCGGATGAAAGAGATGGTTGGTACCCTGTACACGATGGCCCCAG
AGGTGCTGAAGGGGAGCAAGTACGACAGCTCGTGCGACATGTGGAGCCTC
GGTGTCATGGCGTACGTCCTCCTGAGCGGGGACATGCCGTTCGACTGCGG
CACGAAGCAGCGCCTCGTAAAGGCGGTCGAGGACGGACGCTACAGCTTTT
CGGGGAGGCGGTGGGACTACATCACCAAGGAGGCAAGGTAAATAATTGAC
ACGCGCTCGTCTCGGATGAAAGAGATGGTTGGTACCCTGTACACGATGGC
CCCAGAGGTGCTGAAGGGGAGCAAGTACGACAGCTCGTGCGACATGTGGA
GCCTCGGTGTCATGGCGTACGTCCTCCTGAGCGGGGACATGCCGTTCGAC
TGCGGCACGAAGCAGCGCCTCGTAAAGGCGGTCGAGGACGGACGCTACAG
CTTTTCGGGGAGGCGGTGGGACTACATCACCAAGGAGGCAAGGTAA
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