mRNA_H-elongata_contig48335.11985.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: D7FQR5_ECTSI (FAD binding / catalytic/ tRNA dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR5_ECTSI) HSP 1 Score: 553 bits (1426), Expect = 1.460e-195 Identity = 263/309 (85.11%), Postives = 282/309 (91.26%), Query Frame = 1
Query: 7 QVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFR 933
+VFSLAPMMEYTDRHMRYLLRLLT RTVLWTEMVPS TI+HN DLGRFLDYN+EVEHPV+LQIGGSDT+ VREACRLARP+ YDAINLNCGCPS+KVAGKGAFGAALMRSPSLVK+LCLAM+DGAG DTPITVKCRIGVD+DDSYEQLAAFV+EV RG V HFI+HARKAILGGLSPAQNR IPPLK+++VYRLVKDFP VDFTLNGGVNTYEE +SCLEQGAHGVMVGRSW+SNPWYWSQ DS LFG DPGLTRREVL RY EYGERQEKA G WLACRRRLAKP+WH+FHGEKGGKKFR
Sbjct: 80 EVFSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAMKDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQNRNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEEA----VSCLEQGAHGVMVGRSWSSNPWYWSQADSMLFGAKDPGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGGKKFR 384
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A836CCW1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW1_9STRA) HSP 1 Score: 416 bits (1068), Expect = 1.120e-142 Identity = 202/309 (65.37%), Postives = 234/309 (75.73%), Query Frame = 1
Query: 7 QVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFR 933
Q SLAPMMEYTDRHMRY+LRL TK+ V+WTEM+P +I+HN DL R L Y+ EHPV+LQ+GGSD VR AC LARP+ YD INLN GCPS++VAGKGAFGAALMR P LV ++C AMR+G+GG +VKCRIGVDD+DSY LA FVD V RGG V FI+HARKAIL GLSP QNR++PPLK++YVYRLV+DFP + FTLNGGV TY V L+ GAHGVMVGR+ PWYWSQ DS++FG TD L RR+VL Y EY E E AG+ WL RRRL KPVW+LFHGE GGKKFR
Sbjct: 8 QRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGG-AQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQ----EALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFR 311
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A4D9D156_9STRA (tRNA-dihydrouridine synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D156_9STRA) HSP 1 Score: 375 bits (962), Expect = 1.650e-126 Identity = 185/313 (59.11%), Postives = 231/313 (73.80%), Query Frame = 1
Query: 1 PPQVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTD--PGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFR 933
P + SLAPMMEYTDRH+R+LLRLL+KR VL+TEM+ + T+ HN RFL +N EHPV+LQ+GGSD + EA RLA P+ Y+A+NLNCGCPS++V+GKG FGAALMR P V ELC AM +G+ G P+TVKCRIGVDDDDSYEQLA FV+ V V+HF++HARKAILGGLSP QNR +PPLK+ +VYRL ++FP + FTLNGGV +YE+V L +G HGVM+GR+ + P+YWS VD+++FG+ D PGLTRREVL RYG Y + +E G RR L KPV +LF GE GK+FR
Sbjct: 21 PDERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPGQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSRGKIPVTVKCRIGVDDDDSYEQLAHFVETVSGASPVRHFLVHARKAILGGLSPDQNRRVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVA----EHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGP---RMRRLLIKPVHNLFAGEPMGKRFR 326
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A7S3USD9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD9_HETAK) HSP 1 Score: 351 bits (901), Expect = 1.640e-116 Identity = 176/310 (56.77%), Postives = 227/310 (73.23%), Query Frame = 1
Query: 7 QVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNG-HDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFR 933
++FSLAPMM+YTDRHMR+L+RLL+K VL+TEM+ S TI++N ++LGR+LDY++ EHPV+LQ+GGSD +R A A P+ YDA+NLNCGCPS+KVAGKG FGAALMR LV +LC M A D P+TVK RIGVDD+DSYE L F++ V V+HFI+HAR AILGGLSPAQNR+IPPLK++YVY LVKD+P FT+NGG+ YEE+ L +G HGVMVGR+ ++P+ WSQVD ++G +PGLTRRE+L RYGEY + + G R+ L K + + F G++ GKKFR
Sbjct: 50 ELFSLAPMMDYTDRHMRFLMRLLSKDMVLYTEMIASGTIVNNPENELGRWLDYSESCEHPVVLQLGGSDPGELRRAAARAAPYRYDAVNLNCGCPSEKVAGKGCFGAALMREAELVGDLCRGM--AAELDCPVTVKSRIGVDDEDSYEGLCNFIETVADRSPVRHFIVHARTAILGGLSPAQNRQIPPLKYDYVYNLVKDYPEFQFTINGGITEYEEIR----EHLGRGVHGVMVGRAINADPYKWSQVDELVYGAANPGLTRREILERYGEYCDEMVELWGP---RVRQTLKKHILNFFVGQRNGKKFR 350
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A7S2C7I3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I3_9STRA) HSP 1 Score: 326 bits (835), Expect = 1.770e-106 Identity = 167/312 (53.53%), Postives = 219/312 (70.19%), Query Frame = 1
Query: 13 FSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTDPGL-TRREVLARYGEYGERQEKAA----GSYWLACRRRLAKPVWHLFHGEKGGKKFR 933
FS+APMM+YTDRH RYLLRLL+ + VL+TEMV + T++HN D+ R+L +D+VE+PV+LQ+GGSD +R + + A ++YD INLNCGCPSDKVAGKG+FGA LM V +LC AM G PITVKCRIGVDD DSYEQLA FV V + G V+HFI+HARKAILGGLSP +NR IPP+K+++VY+LV DFP + F++NG V TYE+V+ L +G HGVMVGRS PW WS+VDS+++G + +RR+VL Y +Y E++ Y +R + + +LF GE G+KFR
Sbjct: 76 FSVAPMMDYTDRHFRYLLRLLSSKAVLYTEMVGASTLVHNP-DIDRWLRLSDDVENPVVLQLGGSDCEDLRTSVKRASAYNYDEINLNCGCPSDKVAGKGSFGATLMLDAKRVGQLCDAMAQECG--KPITVKCRIGVDDQDSYEQLAEFVGTVSQTGGVEHFIVHARKAILGGLSPEENRRIPPIKYDHVYQLVADFPSLRFSMNGEVKTYEDVS----EHLSRGLHGVMVGRSVIEQPWLWSEVDSRIYGLASDNVPSRRKVLEAYADYAEQEISRMLIKDPKYAPRLKRAILRHTANLFRGEPNGRKFR 380
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A7S0D9F4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D9F4_9EUKA) HSP 1 Score: 314 bits (805), Expect = 7.650e-102 Identity = 161/310 (51.94%), Postives = 209/310 (67.42%), Query Frame = 1
Query: 13 FSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAM-RDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILG-GLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFRR 936
FS+APMM+YTDRH R+LLR++TK+ L+TEM+ S+ ++H D R L Y+D +EHPV LQ+GGSD + + + A P+ YDAINLNCGCPSDKV+G+G+FGAALM+ P LC +M + A DTP++VKCRIGVD++D Y L FV + GV +HFIIHARKAIL LSP QNREIPPLK++YV+RLV DFP F LNGGV + EE L+ G GVMVGR + PWYW VD +LFG +P L+RRE+L Y Y + + ++ + KPV HLF GE+G + +RR
Sbjct: 106 FSVAPMMDYTDRHFRFLLRMITKKAWLYTEMITSEALIHGDAD--RLLRYHDPIEHPVALQLGGSDPDSLAKGVKKALPYAYDAINLNCGCPSDKVSGRGSFGAALMKEPDYTAVLCESMIQQAAATDTPVSVKCRIGVDENDDYHYLKQFVTALGDVGV-RHFIIHARKAILNMNLSPKQNREIPPLKYQYVHRLVVDFPSYSFVLNGGVKSLEEADEF----LKAGVAGVMVGREIINRPWYWGDVDRRLFGVENPRLSRREILGNYSAYAVVEMERDPRLGIST---VLKPVQHLFVGERGARAYRR 405
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A0G4ELS3_VITBC (tRNA-dihydrouridine synthase n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELS3_VITBC) HSP 1 Score: 304 bits (779), Expect = 1.650e-98 Identity = 165/320 (51.56%), Postives = 211/320 (65.94%), Query Frame = 1
Query: 13 FSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHD----------LGRFLDYNDE-VEHPVILQIGGSDTSCVREACRLARPFH-YDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYWSQVDSKLFGTTDPGLTRREVLARYGEYGERQ-EKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFR 933
FS+APMM+YTD+H R+L+RLLT+ L+TEM+ + + + + R L N E +E P +LQ+GGSD + EA R A +H + +NLNCGCPS++VAGKGAFGAALMR P+LV ELC AMR G G P TVKCRIGVDD DS+E+L F+ V V HFIIH+RKAIL GLSP QNR+IPPL +EYVYRLV+ FPG+ FTLNGGV TYE++ C GVMVGR+ P+YWS+VDS+L+G + GL RREVLA YG Y + + E+ S + R L K +LF GE +K++
Sbjct: 21 FSVAPMMDYTDKHFRFLMRLLTRNATLYTEMMAANALHYTNRQAAADATADSMIPRSLATNAESIESPCVLQLGGSDPDVLAEASRTASAYHPFTELNLNCGCPSERVAGKGAFGAALMREPALVAELCKAMRQGGG--RPTTVKCRIGVDDQDSFEELQRFISTVAERAGVSHFIIHSRKAILTGLSPEQNRKIPPLIYEYVYRLVEGFPGLRFTLNGGVLTYEDIDMHFERC--PTLTGVMVGRAVLDRPFYWSEVDSRLYGRDNLGLNRREVLAAYGSYCDAEMERTDPSRQRSLRNLLLKHALNLFAGEPMSRKYK 336
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A0S3SEQ1_PHAAN (Dus domain-containing protein n=9 Tax=Phaseoleae TaxID=163735 RepID=A0A0S3SEQ1_PHAAN) HSP 1 Score: 299 bits (766), Expect = 4.850e-96 Identity = 156/307 (50.81%), Postives = 206/307 (67.10%), Query Frame = 1
Query: 4 PQVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWY-WSQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLA-CRRRLAKPVWHLFHGEKG 918
P FS+APMME+TD H R L RL++K L+TEMV ++TI+H +L RFL Y+ + +HP++LQIGGS+ + +A LA + YD INLNCGCPS KVAG G FG +LM +P V E A+ A + P++VKCRIGVDD DSY +L F+ +V +HFIIH+RKA+L G+SPA+NR IPPLK+EY Y L++DFP + FT+NGG+ + EEV L+ E GAHGVMVGR+ +NPW+ VDS ++GT P LTRR+VL +Y YGE G Y R + KP+ +LFH E G
Sbjct: 64 PPWFSVAPMMEWTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPD-QHPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAI--AATTNVPVSVKCRIGVDDHDSYSELCDFIYQVSSFSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVEEV----LAAREAGAHGVMVGRAAYTNPWHILGHVDSAIYGTPSPDLTRRQVLEKYLTYGE---SVMGKYGRRPTMRDIVKPLLNLFHSEPG 360
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: V4ME53_EUTSA (Dus domain-containing protein n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4ME53_EUTSA) HSP 1 Score: 298 bits (762), Expect = 1.090e-95 Identity = 152/312 (48.72%), Postives = 211/312 (67.63%), Query Frame = 1
Query: 4 PQVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYW-SQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFRR 936
P +FS+APMME+TD H R L RL+TK L+TEM+ +QTI+H ++L +FL ++ + +HP++LQIGGS+ + +A +LA + YD INLNCGCPS KVAG G FG +LM +P LV + A+ D + P+TVKCRIGVDD DSY++L FV +V +HFI+H+RKA+LGG+SPA NR IPPLK+EY Y LV+DFP + FT+NGG+ + V + L++GAHGVMVGR+ +NPW VD+ ++G GLTRR+VL +Y YG+ G+ R L KP+ ++FH E G ++R
Sbjct: 44 PPLFSIAPMMEWTDNHYRTLARLITKHAWLYTEMIAAQTIVHQQNNLDKFLAFSPQ-QHPIVLQIGGSNVESLTKAAKLADAYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGDAMSAIADNT--NVPVTVKCRIGVDDHDSYDELCDFVYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSISMVN----ASLKEGAHGVMVGRAAYNNPWQTLGHVDTAVYGVPSSGLTRRQVLEQYQVYGDAILGTQGNGRPNVRD-LVKPLLNIFHSENGNSLWKR 347
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Match: A0A087H051_ARAAL (Dus domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087H051_ARAAL) HSP 1 Score: 296 bits (759), Expect = 2.080e-95 Identity = 151/312 (48.40%), Postives = 210/312 (67.31%), Query Frame = 1
Query: 4 PQVFSLAPMMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEHPVILQIGGSDTSCVREACRLARPFHYDAINLNCGCPSDKVAGKGAFGAALMRSPSLVKELCLAMRDGAGGDTPITVKCRIGVDDDDSYEQLAAFVDEVHRGGVVQHFIIHARKAILGGLSPAQNREIPPLKHEYVYRLVKDFPGVDFTLNGGVNTYEEVTPIVLSCLEQGAHGVMVGRSWTSNPWYW-SQVDSKLFGTTDPGLTRREVLARYGEYGERQEKAAGSYWLACRRRLAKPVWHLFHGEKGGKKFRR 936
P +FS+APMME+TD H R L RL++K L+TEM+ ++T++H +L RFL ++ +HP++LQIGGS+ + A +L+ + YD INLNCGCPS KVAG G FG +LM +P LV E A+ A + P+TVKCRIGVDD DSY++L FV +V +HFI+H+RKA+LGG+SPA NR IPPLK+EY Y LV+DFP + FT+NGG+ + EV + L++GAHGVM+GR+ +NPW VD+ ++G GLTRR+VL +Y EYG+ G+ R + KP+ +LFH E G ++R
Sbjct: 32 PPLFSVAPMMEWTDNHYRTLARLISKHAWLYTEMIAAETLVHQQTNLDRFLAFSPH-QHPIVLQIGGSNVQNLANAAKLSVAYGYDEINLNCGCPSPKVAGHGCFGVSLMLNPKLVGEAMSAI--AANTNVPVTVKCRIGVDDHDSYDELCDFVHKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSEVN----AALKEGAHGVMIGRAAYNNPWQTLGHVDTTVYGVPSSGLTRRQVLEQYQEYGDSVLGTHGNGRPNVRD-IVKPLLNLFHSENGNSLWKR 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48335.11985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48335.11985.1 >prot_H-elongata_contig48335.11985.1 ID=prot_H-elongata_contig48335.11985.1|Name=mRNA_H-elongata_contig48335.11985.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp MMEYTDRHMRYLLRLLTKRTVLWTEMVPSQTIMHNGHDLGRFLDYNDEVEback to top mRNA from alignment at H-elongata_contig48335:1318..3560- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48335.11985.1 ID=mRNA_H-elongata_contig48335.11985.1|Name=mRNA_H-elongata_contig48335.11985.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2243bp|location=Sequence derived from alignment at H-elongata_contig48335:1318..3560- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48335:1318..3560- >mRNA_H-elongata_contig48335.11985.1 ID=mRNA_H-elongata_contig48335.11985.1|Name=mRNA_H-elongata_contig48335.11985.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig48335:1318..3560- (Himanthalia elongata Himel1 dioecious)back to top |