mRNA_H-elongata_contig48093.11949.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI) HSP 1 Score: 234 bits (598), Expect = 7.960e-73 Identity = 114/208 (54.81%), Postives = 149/208 (71.63%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGLNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMMK 626
HTV+VYGA+T DR +LVMEL++GGDLRTLL + P P +++R I+ DVCSGMAFLHSK +HGDLKSANVL DG G AKI DFGT +W QH STGLAT T+ + ST MS+ W+APEVL+ + ++++SDVYSFGI+AWE+ S++MPW VL G RP IP A ++ DV+++CWA +P ARP F I++ +K
Sbjct: 177 HTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQPFPEEQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTNSTGLAT--YTTRSSRSTPMSLAWSAPEVLEAEGSTYESDVYSFGIVAWEVISKKMPWADKIRPRDVICAVLKGLRPVIPAGATVDIADVMKACWAEEPEARPKFGAIMEGLK 382
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 241 bits (615), Expect = 4.910e-70 Identity = 119/210 (56.67%), Postives = 152/210 (72.38%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGL-NARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMMKS 629
HTV VYGAITSR DR VLVMEL+ GGDLR LL+ ++ PLP ++ R I+ D+C+GM FLHSK +HGDLKSANVL DG G AKI DFGT +W H STGLAT TK +T MS+ W+APEVL +++ SDVYSFGI+AWE+ SR +PW + + R ++ RVVL RPEIP DA ++ ++R+CWAGDP ARP S I++ ++S
Sbjct: 999 HTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNSTGLATY---TKAGQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIES 1205
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 233 bits (595), Expect = 1.730e-67 Identity = 113/209 (54.07%), Postives = 147/209 (70.33%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGLNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMMKS 629
HTV+VYGA+TS+ D VLVMEL++GGDLRTLLR +E PLP++++R I+ D+C+GMAFLH K +HGDLKSANVL DG G AKI DFGT +W QH STGLAT Y TK ST MS+ W+APEVL+ +++ SDVYSFGI+ WE+ S +PW VL GARP +DA ++ ++ ++CW G+P AR F +L+ M S
Sbjct: 879 HTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLAT-YTTTK--PSTQMSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREILSAVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGMDS 1084
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 228 bits (582), Expect = 1.020e-65 Identity = 113/212 (53.30%), Postives = 144/212 (67.92%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGLNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMM--KSW 632
+TV+VYGA+TS +DR VLVMEL+ GDL TLLR++ PLP +++R I+ D+C+GMAFLH K +HGDLKSANVL DG G AKI DFGT +W QH STGLAT TK ST MS+ W+APEVL+ +++KSDVYSFGI+ WE+ SR +PW VL G RP DA ++ D+ ++CW G+P R FS IL+ M K W
Sbjct: 865 NTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTNPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLAT--YTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVLSRELPWANKTRPRDILSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGW 1074
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.200e-65 Identity = 113/212 (53.30%), Postives = 144/212 (67.92%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGLNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMM--KSW 632
+TV+VYGA+TS +DR VLVMEL+ GDL TLLR++ PLP +++R I+ D+C+GMAFLH K +HGDLKSANVL DG G AKI DFGT +W QH STGLAT TK ST MS+ W+APEVL+ +++KSDVYSFGI+ WE+ SR +PW VL G RP DA ++ D+ ++CW G+P R FS IL+ M K W
Sbjct: 890 NTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTKPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLAT--YTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVFSRELPWANKTRPRDILSAVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGW 1099
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI) HSP 1 Score: 225 bits (573), Expect = 7.870e-65 Identity = 115/202 (56.93%), Postives = 144/202 (71.29%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGV-STGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVG-LNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNF 602
HTV+VYGAITS+ +R VLVMEL+ GGDLR +L+ +E PLP D+ R I++DVC+GMAFLHSK +HGDLKSANVL DG G AKI DFGT +W Q+ STGLAT T STH+S+ W APEVL+ S SDVYSFG++AWE+ +R+ PW R IF RVV+ RP IP DA ++ +++RSCWA +P RP F
Sbjct: 725 HTVNVYGAITSQPNRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLAT--YTTNPGPSTHISLAWTAPEVLEAKETSKASDVYSFGMVAWEVLTRQTPWADQTRPRDIFLRVVMREERPAIPADAPVDIAEMVRSCWAQEPLDRPTF 924
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI) HSP 1 Score: 225 bits (573), Expect = 8.450e-65 Identity = 109/209 (52.15%), Postives = 143/209 (68.42%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGLNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMMKS 629
HTV+VYGA+TS DR VLVMEL++GGDLRTLLR + PLP +++R I+ D+C+GMAFLHSK +HGDLKSANVL DG G AKI DFGT +W QH STGLAT T+ + T MS+ W+APEVL+ ++ SDVYSFGI+ WE+ S +PW + VL G RP + A +M ++ ++CW G+P AR F +++ M S
Sbjct: 740 HTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLAT--YTTRSSPGTQMSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREILSAVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGMMS 946
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE) HSP 1 Score: 222 bits (566), Expect = 5.290e-64 Identity = 112/209 (53.59%), Postives = 145/209 (69.38%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGVSTGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVGLNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILDMMKS 629
+TV+V+GA+TS DR VLVMEL+ GGDL TLLR+++ LP +++R I+ D+C+GMAFLHSK +HGDLKSANVL D G AKIADFGT +W Q STGL TTY TK + +T MSI W+APEVLD + +S++SDVYSFGI+ WE+ SR +PW VL G RP A ++ D+ ++CW G+P R F ILD MK+
Sbjct: 687 NTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGL-TTYT-TKSSQTTQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEVLTAVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAILDGMKA 893
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI) HSP 1 Score: 223 bits (569), Expect = 6.880e-64 Identity = 114/207 (55.07%), Postives = 142/207 (68.60%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGV-STGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVG-LNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDILD 617
HTV+VYGAITS DR VLVMEL+ GGDLR +L+ +E PLP D+ R I+ DVC+GMAFLHSK +HGDLKSANVL DG G AKI DFGT +W Q+ STGLAT T S H+S W APEVL+ S SDVYSFG++AWE+ +R+ PW R I+ RVV+ RP IP DA ++ +++RSCWA +P RP F + +
Sbjct: 887 HTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLAT--YTTNPGPSAHISFAWTAPEVLESKETSTASDVYSFGMVAWEVLTRQTPWADQARPRDIYLRVVMREERPAIPADAPVDIAEMVRSCWAQEPEDRPTFPGLCN 1091
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 223 bits (568), Expect = 1.140e-63 Identity = 111/205 (54.15%), Postives = 143/205 (69.76%), Query Frame = 3
Query: 3 HTVHVYGAITSRTDRFVLVMELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKSANVLFDGCGTAKIADFGTEKWVQHGV-STGLATTYVGTKVTSSTHMSIPWAAPEVLDDDPASFKSDVYSFGIIAWEIASRRMPWVG-LNARMIFRRVVLAGARPEIPNDAAEEMEDVIRSCWAGDPTARPNFSDI 611
HTV+VYGAITS DR +LV+EL+ GGDLRT+L+ +E PLP +++R I+ D+C+GMAFLHSK +HGDLKSAN+L D G AKI DFGT +W Q+ STGLAT T STH+S W APEVL+ S SDVYSFGI+ WE+ SR++PW R I+ RVV+ G RP +P DA ++ D++ CWA +PT RP F +
Sbjct: 949 HTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLAT--YTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQAL 1151 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48093.11949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48093.11949.1 >prot_H-elongata_contig48093.11949.1 ID=prot_H-elongata_contig48093.11949.1|Name=mRNA_H-elongata_contig48093.11949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp MELMTGGDLRTLLRQAEAPLPRDRARGIMNDVCSGMAFLHSKGAIHGDLKback to top mRNA from alignment at H-elongata_contig48093:1920..3366- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48093.11949.1 ID=mRNA_H-elongata_contig48093.11949.1|Name=mRNA_H-elongata_contig48093.11949.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1447bp|location=Sequence derived from alignment at H-elongata_contig48093:1920..3366- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48093:1920..3366- >mRNA_H-elongata_contig48093.11949.1 ID=mRNA_H-elongata_contig48093.11949.1|Name=mRNA_H-elongata_contig48093.11949.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig48093:1920..3366- (Himanthalia elongata Himel1 dioecious)back to top |