mRNA_H-elongata_contig47701.11905.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A6H5JKE5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKE5_9PHAE) HSP 1 Score: 381 bits (979), Expect = 3.580e-124 Identity = 226/374 (60.43%), Postives = 245/374 (65.51%), Query Frame = 1
Query: 1 GLPLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDAD--------------------SESNSAGDDIDSSPPSTAR----VTADRVRERGDGRXXXXXXXXRE-------------------REGSGLGGAQRSRSSSKG-----------SPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHP-EGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPDQ 957
G + TEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQS WRDMRLDP+GPEVMKSILRQIL+G RFLHE G++HRDLKPSNLIVSL P + GD +SS VR+ G XXXXXXX R G A +G + +LLR+ADFSSAVDE A+ GLYGA GP Q EETLQYAPPEVLFDPETAYSA+RP+SYD WSIGVILLELILGTPEVFTVDQRT AILDRDLAFEDD RAKAH+LAAMADMCIYS PG H EG PLGD AVV+ERCTLADLG A+HTRD LD+GFPDQ
Sbjct: 299 GEAVPTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSYFWRDMRLDPEGPEVMKSILRQILEGTRFLHETGVVHRDLKPSNLIVSLSPVAAXXXXXXXXXXXXXXXXXXXXPGPRPGSGDPTGDGYESSXXXXXXXXXXTETTPVRDWGSDSSXXXXXXXXXXXXXXXXXXXXXXPEXRXXRTGGSFESADVGGEHEQGXXXXXXXXXRRTRLLLRVADFSSAVDEGAMPTGLYGAEGPGQSEETLQYAPPEVLFDPETAYSAQRPESYDMWSIGVILLELILGTPEVFTVDQRTRAILDRDLAFEDDEVRAKAHLLAAMADMCIYSGPGSHDGEGSSSPLGDTAVVNERCTLADLGGAVHTRDALDIGFPDQ 672
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: D8LCY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY1_ECTSI) HSP 1 Score: 385 bits (990), Expect = 8.910e-122 Identity = 212/326 (65.03%), Postives = 229/326 (70.25%), Query Frame = 1
Query: 1 GLPLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKG------SPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHP-EGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPDQ 957
G + TEMWLVFRDEG SLRHYLYTEREAEGFVLHGQS WRDMRLDP+GPEVMKSILRQ L+G RFLHE G++HRDLKPSNLIVSL P P + T GDGR E + +GG R + +LLR+ADFSSAVDE A+ AGLYG GP Q EETLQYAPPEVLFDPETAYSA+RP+SYD WSIGVILLELILGTPEVFTVDQRT AILDRDLAFEDD RAKA LA DMCIYS PG H EG PLGD AVV+ERCTLADLG A+HTRD LD+GFPDQ
Sbjct: 281 GEAVPTEMWLVFRDEGTSLRHYLYTEREAEGFVLHGQSYFWRDMRLDPEGPEVMKSILRQTLEGTRFLHETGVVHRDLKPSNLIVSLPPVAXXXXXXXXXXXXX--XXGPRPGSGDPT-------GDGRRTGGSF-----ESADVGGEHEQRXXXXXXXXXXRTRLLLRVADFSSAVDEGAMPAGLYGTEGPGQSEETLQYAPPEVLFDPETAYSAQRPESYDMWSIGVILLELILGTPEVFTVDQRTRAILDRDLAFEDDEVRAKALFLAVRGDMCIYSGPGSHDGEGSSSPLGDTAVVNERCTLADLGGAVHTRDALDIGFPDQ 592
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: T0RAV5_SAPDV (CMGC protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RAV5_SAPDV) HSP 1 Score: 192 bits (487), Expect = 1.360e-51 Identity = 112/318 (35.22%), Postives = 152/318 (47.80%), Query Frame = 1
Query: 1 GLPLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHPEGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPD 954
LP Q E+WLVF +EG+SLRHY+Y+ A VL S W MR++P G +V++ I+RQ+L G +H +G++HRD+KPSN++V+ T PVL+++ADF SAVD A K LYG GP+Q EET +Y PPEVL + Y P SYD WS+GV+ LELILG+P VF + R A LD L + D + K+++L + CIY P ++ D A+V C K I RDPL+ GF D
Sbjct: 210 SLPTQ-ELWLVFYEEGISLRHYMYSSTRASASVLVQPSLFWHRMRVEPGGADVLREIMRQLLQGVAAVHAKGMVHRDIKPSNILVNNQDT--------------------------------------------------------------------PVLVKLADFGSAVDTYANKV-LYGERGPSQAEETREYQPPEVLLHGDIPYDPALPTSYDMWSVGVVFLELILGSPHVFAITSRARAKLDVHLQHKSDETKRKSYLLHVFTEFCIYE-----PPSLYRYHNDYALVHSDCNFGTFNKTIQARDPLERGFQD 452
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A6G0W433_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W433_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.950e-49 Identity = 106/312 (33.97%), Postives = 149/312 (47.76%), Query Frame = 1
Query: 19 EMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHPEGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPD 954
E+WLVF DEG+SLRHY+YT+ + VL S W MR++ +G V+K ++RQ+++G LH+RGI HRD+KPSN+++S K + +++AD SAVDE LYG GP+Q EET +Y PPEVLF + Y P SYD WS+GV+ LELILG+P VF++ R A +D L + +A R+K+++L + CI+ P +H D A+V C I RDPL +GF D
Sbjct: 248 ELWLVFYDEGISLRHYMYTKTRSLSSVLFEPSLFWERMRVEEEGALVLKEMVRQLIEGVAALHDRGITHRDIKPSNILIS---------------------------------------------------------------------KDTQFAVKLADLGSAVDEHTHHY-LYGTKGPSQAEETREYQPPEVLFHGDVPYDYANPTSYDMWSVGVVFLELILGSPHVFSISSRARAKVDARLHDKSEAVRSKSYLLHVFTEFCIFQ-----PPSLHRYHQDYALVHSACNFGTFNTTIQQRDPLGIGFQD 484
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A485L2U0_9STRA (Aste57867_14927 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2U0_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.880e-48 Identity = 114/316 (36.08%), Postives = 154/316 (48.73%), Query Frame = 1
Query: 7 PLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHPEGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPD 954
PLQ E+WLVF DEG+SLRHY+YT+ + VL S W+ MR+D +G +V+K ILRQ+L G LH+RGI HRD+K L + V PS ++ D + ++++AD SAVDE + LYG GPTQ EET +Y PPEVLF + Y P SYD WS+GV+ LELILG+P VF++ R A +D L + +A R K+++L + + CI+ P ++ D AVV C I RDPL GF D
Sbjct: 260 PLQ-ELWLVFFDEGISLRHYIYTKTRSLSSVLFEPSLFWKRMRVDEEGGDVLKEILRQLLQGVAALHDRGITHRDIKVRRLSWHIHLIV-----------------DEQPSNILISQD-------------------------------------AQFVVKLADLGSAVDEFTHRH-LYGEKGPTQGEETREYQPPEVLFHGDVPYDYATPTSYDMWSVGVVFLELILGSPHVFSITSRARAKVDAHLHDKSEAMRTKSYLLHVLTEFCIFQ-----PPSLYRYHEDYAVVHSTCNFGTFNTTIQKRDPLGRGFQD 514
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A024U529_9STRA (CMGC protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U529_9STRA) HSP 1 Score: 182 bits (461), Expect = 5.910e-48 Identity = 110/319 (34.48%), Postives = 157/319 (49.22%), Query Frame = 1
Query: 1 GLPLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFD-PETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHPEGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPD 954
G PLQ E+WLVF DEG+SLRHY+YT+ +++ FV+ S W+ MR + +G V + ILRQ+L LHERGI HRD+KPSN+++S DD +++++ADF SAVD A +YG GPTQ EET +Y PPEVLF + Y P SYD WS+GV+ LEL+LG+P VF++ R A +D + + +A R+K+++L + + CI+ P + D A+V + C I +RDPL +G D
Sbjct: 217 GTPLQ-ELWLVFYDEGISLRHYIYTKTKSQKFVVVEPSLFWKRMRTEAEGAGVYREILRQLLQAVAALHERGITHRDIKPSNILIS-----------------HDDN----------------------------------------------------LVVKLADFGSAVDAFT-HAHMYGDKGPTQAEETREYQPPEVLFHGDDVPYDYATPTSYDMWSVGVVALELLLGSPHVFSISSRARAKVDAHMRDKPEATRSKSYLLHVLTEFCIFQ-----PPSLARYHEDYALVHDACNFGTFNTTIQSRDPLGLGLQD 459
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A1W0A7P0_9STRA (Phosphatase 1L n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7P0_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.600e-47 Identity = 106/312 (33.97%), Postives = 148/312 (47.44%), Query Frame = 1
Query: 19 EMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHPEGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPD 954
E+WLVF DEG+SLR Y+YT + VL S W MR++ G V+K I+RQ+L +H +GI+HRD+KPSN++++ ++GSPVL+++ADF SAVD+ A + LY GP+Q EET +Y PPEVL + Y P SYD WS+GV+ LELILG+P VF++ R+ A LD L + + + K+++L + CIY P + D A+V C K I RDPL GF D
Sbjct: 214 ELWLVFYDEGISLREYMYTTTRSASSVLFQPSLFWHRMRVEDGGSHVLKEIMRQLLQAVAAVHAKGIVHRDIKPSNILIN--------------------------------------------------------------------NRGSPVLVKLADFGSAVDDYAHEF-LYENKGPSQAEETREYQPPEVLLHGDIPYDPVVPTSYDIWSVGVVFLELILGSPHVFSISSRSRAKLDIHLQHKSEDTKLKSYLLHVFTEFCIYE-----PPSLFRYHNDYALVHSDCNFGTFNKTIQNRDPLHRGFQD 451
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A7S0HI00_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HI00_9CRYP) HSP 1 Score: 166 bits (421), Expect = 4.490e-46 Identity = 106/278 (38.13%), Postives = 138/278 (49.64%), Query Frame = 1
Query: 16 TEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQ-SNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIV--SLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDLAFEDDAARAKAHVLAAMADMCIYSRPGGHP 840
TE+WLVF+ EG SLR YLY E EG ++H Q S+ WRD+R P GP ++K ++RQIL G F H + + HRDLKP NLIV L + L P + E S ++L++ADF SAVD +++ LYG GP+QEEETL YAPPEVLF +A RP SYD WS GVI LE++LGT +VF +D RT A + + +A +L A + IY P P
Sbjct: 42 TELWLVFKFEGQSLRQYLY-ETNVEGSLIHFQTSHFWRDLRQSPHGPRMIKEVMRQILQGVSFCHTKNVTHRDLKPDNLIVHVQLPSSGLVPSFEEERFS---------------------------------------------------------IVLKLADFGSAVDAYSVEH-LYGTGGPSQEEETLDYAPPEVLFGDGVPCAAMRPHSYDLWSAGVIFLEMLLGTSKVFQIDGRTRAYMTVKMPNAPPKMIEQACLLKAFMEYRIYPPPSHSP 260
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A0A7CPJ9_9STRA (Secreted protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CPJ9_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.720e-45 Identity = 113/330 (34.24%), Postives = 155/330 (46.97%), Query Frame = 1
Query: 1 GLPLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPEVFTVDQRTHAILDRDL------------AFEDDAARAKAHVLAAMADMCIYSRPGGHPEGVHWPLGDRAVVDERCTLADLGKAIHTRDPLDVGFPD 954
G+ LQ E+WLVF +EG+SLRHY+Y +E V+ S+ W MR++ G EV+K ++RQ+L G +H RGI+HRD+K VP P D+ PS V ++ +PVL+++ADF SAVD A LYG GP+Q EET +Y PPEVL + Y RP SYD WS+GV+ LELILG+P VF + R A LD L A + A+ K+++L + CIY P + + A+V C + + RDPL GF D
Sbjct: 203 GVGLQ-ELWLVFYEEGISLRHYMYATTRSESSVVFQPSHFWHRMRVEDSGGEVLKEVMRQLLQGVAAVHARGIVHRDIK--------VPRHPVPGPDTA------------PSNILVN------------------------------------NQDTPVLVKLADFGSAVDGYANDV-LYGEKGPSQAEETREYQPPEVLLHGDIPYDPARPTSYDMWSVGVVFLELILGSPHVFAISSRARAKLDVHLQHKARALDSAYKASRSEEAKRKSYLLQVFTEFCIYE-----PPSLVRYHNEYALVHSDCNFGTFNQTLQARDPLGRGFQD 469
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Match: A0A836CIC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIC2_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.080e-44 Identity = 96/234 (41.03%), Postives = 127/234 (54.27%), Query Frame = 1
Query: 1 GLPLQTEMWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSILRQILDGARFLHERGILHRDLKPSNLIVSLVPTVLTPDADSESNSAGDDIDSSPPSTARVTADRVRERGDGRXXXXXXXXREREGSGLGGAQRSRSSSKGSPVLLRIADFSSAVDEEAIKAGLYGATGPTQEEETLQYAPPEVLFDPETAYSAERPDSYDAWSIGVILLELILGTPE 702
G+ Q E+WLVF DEG SL+ YLYTE FV+HGQS+ WR +RL +G + M+ +LRQ+L LH+ GI+HRDLKPSNLIV TP+ S P+ LR+ADFSSA+D A++ GL+G GPT++E ++ YAPPEVLFD + A S+ RPD+YD WS+GVI LE++LGTP+
Sbjct: 145 GINGQDELWLVFHDEGASLQKYLYTELVTRDFVVHGQSDFWRTLRLTREGHDTMRDVLRQLLSAVATLHDLGIVHRDLKPSNLIV-------TPEHPQNQ------------------------------------------SXXXXXXXXXXXXXXXPLSLRVADFSSAIDASALEQGLFGLEGPTRQELSIDYAPPEVLFDADAALSSARPDAYDMWSVGVIFLEMVLGTPQ 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47701.11905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47701.11905.1 >prot_H-elongata_contig47701.11905.1 ID=prot_H-elongata_contig47701.11905.1|Name=mRNA_H-elongata_contig47701.11905.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=312bp MWLVFRDEGMSLRHYLYTEREAEGFVLHGQSNLWRDMRLDPKGPEVMKSIback to top mRNA from alignment at H-elongata_contig47701:478..3601- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47701.11905.1 ID=mRNA_H-elongata_contig47701.11905.1|Name=mRNA_H-elongata_contig47701.11905.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3124bp|location=Sequence derived from alignment at H-elongata_contig47701:478..3601- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47701:478..3601- >mRNA_H-elongata_contig47701.11905.1 ID=mRNA_H-elongata_contig47701.11905.1|Name=mRNA_H-elongata_contig47701.11905.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1872bp|location=Sequence derived from alignment at H-elongata_contig47701:478..3601- (Himanthalia elongata Himel1 dioecious)back to top |