mRNA_H-elongata_contig47587.11887.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5KEC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC8_9PHAE) HSP 1 Score: 226 bits (575), Expect = 1.000e-71 Identity = 102/140 (72.86%), Postives = 125/140 (89.29%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 420
VK ++EMY+AT +QFK EMAA I G RLLHLN+DLWVDKFSSLKYIG++LFY+DR W LRSRLIAVRQFNPT E+LE +RLSALL++Y+ ++ EE+ LD +++FSATSDAGSDV+RLCD+LLPGLWEWCVC+M+NCALV
Sbjct: 56 VKQMVVEMYAATASQFKMEMAAQIGGMRLLHLNLDLWVDKFSSLKYIGIRLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALV 195
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5KWS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS6_9PHAE) HSP 1 Score: 219 bits (557), Expect = 3.340e-67 Identity = 97/140 (69.29%), Postives = 124/140 (88.57%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 420
VK ++EMY+AT +QFK EMAA I G RLLHL++DLWVDKFSSLKY+G+ LFY+DR W LRSRLIAVRQFNPT E+LE +RLSAL+++++ ++ EE+ LD +++FSATSD+GSDV+RLCD+LLPGLWEWCVC+M+NCALV
Sbjct: 209 VKQMVVEMYAATASQFKMEMAAQIGGMRLLHLSLDLWVDKFSSLKYVGIPLFYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSALVQKHLESVLEEYGLDVSLVFSATSDSGSDVKRLCDVLLPGLWEWCVCHMINCALV 348
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 192 bits (489), Expect = 4.140e-55 Identity = 87/117 (74.36%), Postives = 105/117 (89.74%), Query Frame = 1
Query: 70 ITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 420
I G RLLH N+DLWVDKFSSLKYIG++LFY DR W LRSRLIAVRQFNPT E+LE +RLSALL++Y+ ++ EE+ LD +++FSATSDAGSDV+RLCD+LLPGLWEWCVC+M+NCALV
Sbjct: 158 IGGMRLLHHNLDLWVDKFSSLKYIGIRLFYADRTWVLRSRLIAVRQFNPTKELLEDNRLSALLQKYLESVLEEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMINCALV 274
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.670e-53 Identity = 89/141 (63.12%), Postives = 116/141 (82.27%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVR-RLCDILLPGLWEWCVCYMLNCALV 420
V ++E Y+ATTAQF+AE+ A++ G LHL++DLWVDK S+L ++GV+LFYIDR W L+SRL+AVRQFNPT EM E+ RLSA+LE+Y+T + EEF LD +M+FSATSDAGSDV+ RLC L+P LW+ CVC+MLNC+LV
Sbjct: 45 VAKMVVEYYAATTAQFQAEITAEVGGVPRLHLDLDLWVDKSSTLMFMGVRLFYIDREWRLKSRLLAVRQFNPTLEMFENERLSAVLEKYLTDVLEEFGLDVSMLFSATSDAGSDVKHRLCHTLIPRLWKSCVCHMLNCSLV 185
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 183 bits (464), Expect = 2.300e-51 Identity = 83/136 (61.03%), Postives = 110/136 (80.88%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLN 408
VK ++E Y+AT AQFK EMA ++ G LHL+++LWVDK SSLKY+GV+ FY++ W+L+S L+AVRQFNPT E L++ RLS LLE+YV + EEF +DA+++FSATSDAG DV+RLC +LLPGL EWCVC+ML+
Sbjct: 156 VKRMVVECYAATAAQFKEEMATEVAGVPCLHLSLELWVDKSSSLKYMGVRFFYVNSVWQLKSYLLAVRQFNPTPETLKNERLSELLEKYVFAVLEEFGIDASLLFSATSDAGGDVKRLCSVLLPGLREWCVCHMLS 291
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JM59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM59_9PHAE) HSP 1 Score: 161 bits (407), Expect = 2.110e-46 Identity = 77/114 (67.54%), Postives = 96/114 (84.21%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSD 342
VK +++MY+AT +Q+K EMAA I G RLLHLN DLWVDKFSSLK IG++LFYIDR W LRSRLIAVRQFNPT E+LE +RL ALL++Y+ ++ EE+ LD +++FSATSDAGSD
Sbjct: 37 VKQVVVDMYAATASQYKMEMAAQIGGMRLLHLNRDLWVDKFSSLKCIGIRLFYIDRTWVLRSRLIAVRQFNPTKELLEDNRLLALLQKYLESVLEEYGLDVSLLFSATSDAGSD 150
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5KHW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.580e-46 Identity = 80/127 (62.99%), Postives = 102/127 (80.31%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVR-RLCDILLPGL 378
V ++E Y+ATTAQFKAE+AA++ G LHL+++LWVDK S+L ++GV+LFYIDR W LRSRL+AVRQFNPT EM E+ RLS LLE+++T + E F LD M+FSATSDAGSDV+ RLC IL+P L
Sbjct: 58 VAKMVVEYYAATTAQFKAEIAAEVGGVPRLHLDLELWVDKSSTLMFMGVRLFYIDREWRLRSRLLAVRQFNPTPEMFENERLSKLLEKHLTDVLE-FGLDVYMLFSATSDAGSDVKHRLCYILIPRL 183
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 148 bits (374), Expect = 8.310e-40 Identity = 63/93 (67.74%), Postives = 82/93 (88.17%), Query Frame = 1
Query: 142 GVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 420
G++L+Y+DR W LRSRLIAVRQFNPT E+LE +RLS LL++Y+ + E+ LD +++FSATSDAGSDV+RLCD+LLPGLWEWCVC+M+NCA+V
Sbjct: 3 GIRLYYVDRTWVLRSRLIAVRQFNPTKELLEDNRLSTLLQKYLERVLAEYGLDVSLLFSATSDAGSDVKRLCDVLLPGLWEWCVCHMMNCAVV 95
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A2V3ILY8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY8_9FLOR) HSP 1 Score: 128 bits (322), Expect = 4.330e-34 Identity = 56/142 (39.44%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRL--LHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLCDILLPGLWEWCVCYMLNCALV 420
++ ++++Y TT+ ++ +I+ L LH+N++LW + S ++ G+QLFY+ R WE+++ L+AVR F P+ +L LS +L+ + + EFN+ + I S+TSD GSDV+RLC +L+P WEWC+ +MLNC LV
Sbjct: 56 IRKLVVKIYIGTTSSLMKKLRKEISVTPLAFLHINVNLWTSRLSKDRFFGIQLFYVSREWEVKAVLLAVRHFCPSGNLLPGRSLSDILQLWTNKIILEFNVSYDKILSSTSDTGSDVKRLCSVLIPESWEWCLPHMLNCVLV 197
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 5.650e-21 Identity = 51/141 (36.17%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 1 VKHKIIEMYSATTAQFKAEMAADITGGRL--LHLNIDLWVDKFSSLKYIGVQLFYIDRNWELRSRLIAVRQFNPTSEMLESSRLSALLEEYVTTLFEEFNLDANMIFSATSDAGSDVRRLC-DILLPG---LWEWCVCYML 405
VKH I E+Y AT M ++ L LH NID+W DK S K++G+ +FY+D N+EL+ L++++++ P L R S +L + + ++ EEF L + + S T+D+GSDV+ + + L P LW WC C+++
Sbjct: 226 VKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLM 366 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47587.11887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47587.11887.1 >prot_H-elongata_contig47587.11887.1 ID=prot_H-elongata_contig47587.11887.1|Name=mRNA_H-elongata_contig47587.11887.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp MYSATTAQFKAEMAADITGGRLLHLNIDLWVDKFSSLKYIGVQLFYIDRNback to top mRNA from alignment at H-elongata_contig47587:2989..3661+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47587.11887.1 ID=mRNA_H-elongata_contig47587.11887.1|Name=mRNA_H-elongata_contig47587.11887.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=673bp|location=Sequence derived from alignment at H-elongata_contig47587:2989..3661+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47587:2989..3661+ >mRNA_H-elongata_contig47587.11887.1 ID=mRNA_H-elongata_contig47587.11887.1|Name=mRNA_H-elongata_contig47587.11887.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig47587:2989..3661+ (Himanthalia elongata Himel1 dioecious)back to top |