mRNA_H-elongata_contig47455.11868.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47455.11868.1
Unique NamemRNA_H-elongata_contig47455.11868.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S1BH14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BH14_9STRA)

HSP 1 Score: 186 bits (472), Expect = 6.900e-52
Identity = 92/196 (46.94%), Postives = 128/196 (65.31%), Query Frame = 1
Query:    4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQA 591
            L  K GAV VTPRN  +L++ G   LL+PGGV+E  H K E Y +FWPEK++FVR+AA +NATI+P +A+G+ADS  IL+D  D+  LPFG+G+ + +++   P AR D   E F+ P  +P    +PARHYFVFG+P +   VD RD +AC R+Y  T+  + RG   +L AR++DPY    +RL+ E     QA
Sbjct:  467 LFQKFGAVEVTPRNYYRLMQTGQAALLFPGGVREVFHGKDEAYKLFWPEKTDFVRIAAKFNATIIPVSAVGAADSVNILIDPPDMLNLPFGLGERLANSSAAAPIARFDRAEERFVAPFALPN--GLPARHYFVFGQPRDAGSVDHRDAEACARLYRETREELERGFDDVLRAREHDPYREAGRRLVEERARGRQA 660          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S4HRM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRM0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.260e-51
Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 1
Query:    4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGD-SVQDAADMMP-RARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETV 576
            L    GAV VTPRN  +L++ G + LL+PGGV+E  H K E + +FWPEK +FVR+AA +NAT+VP +A+G+ADS  IL+D  DI  LPFG+G+ +  ++A++M  R   D+QSE F PP  +PK   +PARHYFVFG P++T  +D  D++ C   YD  KS + RG   +L+AR+ DP+ + A+R+ +E V
Sbjct:  521 LFETFGAVMVTPRNYYRLMQTGQNALLFPGGVREVFHGKDEAHQLFWPEKVDFVRIAAKWNATVVPISAVGAADSVNILIDAPDILKLPFGIGERAANNSANVMSARFDGDEQSELFQPPFALPK--PLPARHYFVFGTPMDTEHLDHSDKEGCENFYDNVKSEMMRGFDDILQARENDPWKDTARRIAFEQV 711          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S2K9L3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K9L3_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.420e-49
Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 1
Query:    4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQ--SEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVM 579
            L    GAV VTP+N  +L++ G   LL+PGGV+E  H K E Y + WPEK++FVR AA +NATI+P +A+G+ADS  IL+D  D+  LPFG+GD + +++  +  AR D    SE F  P  +PK   +P RHYFVFG+PI T  +D  +R +C  +Y+  K  ++RG   +L+AR+ DPY     R+ YE  +
Sbjct:  312 LFETFGAVRVTPKNYYRLMQTGQAALLFPGGVREVFHGKNEAYQLMWPEKTDFVRTAAKFNATIIPLSAVGAADSVNILIDAPDMLNLPFGLGDRIANSSSSIMAARYDGDKSSELFAAPFAIPK--PLPDRHYFVFGKPIYTNEIDHLNRTSCDAIYEEVKDEMNRGFSDVLKAREKDPYRGSLTRIAYEQAL 503          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: B8BRN2_THAPS (AB hydrolase-1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRN2_THAPS)

HSP 1 Score: 178 bits (451), Expect = 2.680e-48
Identity = 92/197 (46.70%), Postives = 136/197 (69.04%), Query Frame = 1
Query:    1 ELMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEK-SEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQS--EYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYG-NIAKRLLYETVM 579
            +L +  GAV VTP+N  +LL+    VLL+PGGVKEALH KGE+Y +FWP+K ++FVR+AA +NATIVP +AIG+ADS +I++D  ++  LPFG+GD++++       AR D Q   E F+PPL VPK    PARHYF+FGR  +T+ +D +++DAC+ +Y+  ++ +   I  LL AR+ DP+  +  KR  Y+ + 
Sbjct:  636 DLFSMFGAVKVTPKNFYRLLQTNQAVLLFPGGVKEALHGKGEDYEVFWPDKKTDFVRVAARFNATIVPISAIGAADSVDIVLDAKELLDLPFGIGDNLKNFNANATSARYDTQDGEELFVPPLAVPK--PFPARHYFLFGRAFDTSSIDPQNKDACQTMYEEIENELRSDIDALLAARERDPFALDGGKRAWYQRLF 830          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S3Q0K0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.870e-47
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1
Query:   13 KLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPE-KSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRAR--QDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQASNSD 603
            + GAV VTPRN  +L++ G   LL+PGGV+E  H K E Y +FWPE K +FVR A+ +NATIVP +A+G+ADS  IL+D  D+  LPFG+G+   +    +  AR  QD+ +E F PP++   FPK+PARHYFVFG+P +T  +D R+ + C ++Y   K  + RG+  LL AR+ DPY +   R+  E V    A   D
Sbjct:  543 QFGAVMVTPRNYYRLMQTGQTGLLFPGGVREVFHGKDEAYELFWPEDKLDFVRTASRFNATIVPISAVGAADSLNILVDSPDVLDLPFGIGERAANQTKNVMSARFDQDNTAELFQPPVI---FPKIPARHYFVFGKPFDTENIDHRNAEECTKLYAGVKGELRRGLDDLLVARENDPYKDTPMRIAVEKVSGKPAPTFD 739          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S2XNY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNY5_9STRA)

HSP 1 Score: 162 bits (410), Expect = 2.950e-47
Identity = 79/182 (43.41%), Postives = 119/182 (65.38%), Query Frame = 1
Query:   55 LLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAA--DMMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQAS 594
            +++ G + LL+PGGV+E  H K E Y +FWPEK +FVR+AA +NAT+VP +A+G+ADS  IL+D  DI  LPFG+G+   +++   +  R   +++ E F PP  +PK   +PARHYFVFG+P++T  V+ +D+ AC   Y   K  + RG   +L AR+ DP+ N A RL +E +   +A+
Sbjct:    1 MMETGQNALLFPGGVREVFHGKDEAYQLFWPEKVDFVRIAARFNATVVPLSAVGAADSVNILIDAPDILKLPFGIGERAANSSANTISARFNVNNEGELFQPPFALPKL--LPARHYFVFGKPMSTENVNYKDKAACDDFYQNVKGEMQRGFDDVLRAREKDPFKNTASRLRHEVLTGKKAA 180          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A2P6TRL1_CHLSO (Acyltransferase chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TRL1_CHLSO)

HSP 1 Score: 173 bits (438), Expect = 7.640e-47
Identity = 95/199 (47.74%), Postives = 126/199 (63.32%), Query Frame = 1
Query:    1 ELMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQ-----DDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMR 582
            E M+  GAVPV+ +NM +LL+  + VLL+PGGV+EA   +GEEY +FWPEKSEF+RMAA + ATIVPFAA+G  DS  I+ D   +  +P  +GD V+  A  +P+AR+       + E F+ PL  PK P  P R YFVF +PI T+  D +DR  C  +Y  TK++V  GI +LL+ R  DPYG    R LYE   R
Sbjct:  514 EFMSTFGAVPVSAKNMHRLLQNKEAVLLFPGGVREAYKRRGEEYQLFWPEKSEFIRMAARFGATIVPFAAVGVDDSLNIIADSQQLEAMPV-LGDMVKRRAGGLPQARKGVAAASFEEESFVAPLATPKLP--PGRLYFVFQQPIQTSPEDLKDRQRCDDMYRATKASVEEGIAWLLQKRKQDPYGEFLPRQLYEAAYR 709          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A3M7KUL9_AUXPR (Hydrolase_4 domain-containing protein n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KUL9_AUXPR)

HSP 1 Score: 171 bits (432), Expect = 2.260e-46
Identity = 90/197 (45.69%), Postives = 129/197 (65.48%), Query Frame = 1
Query:    1 ELMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQ-----SEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETV 576
            +++   GAV V+PRNM +LL  G+ +LL+PGG++EA   +GEEY +FWP++SEFVRMAA + ATIVPFAA+G  DS  IL+D   +  LPF VGD+++    ++P+AR         S+ F+PP+ +P+    P R YF+F  PI+T   + RDR AC  ++ R K +V  GI +LL+AR  DPY     RLL E++
Sbjct:  427 QMLETFGAVRVSPRNMFRLLSNGEAILLFPGGMREAYKGRGEEYRLFWPDRSEFVRMAARFGATIVPFAAVGIDDSLNILLDPSQVQALPF-VGDALRRRQALLPQARSGPMADAGWSDGFVPPVSIPR--GAPQRLYFLFQAPIHTDPSEARDRQACDALHSRIKGSVQEGIDFLLQARTGDPYAAATSRLLRESL 620          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A1Y5IEX5_OSTTA (Alpha/Beta hydrolase protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IEX5_OSTTA)

HSP 1 Score: 171 bits (434), Expect = 3.040e-46
Identity = 91/202 (45.05%), Postives = 123/202 (60.89%), Query Frame = 1
Query:   10 AKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDD--------QSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQA 591
            A  GAVPV+  N  +L+K G+ VLL+PGGV+EA   K EEY +FWP K EFVRMA  +NA IVPFAA+G+ DS +I+ D  D+   P G+GDSV++ +  +P AR  D        + E F+ P++ PK    P R YF F  PI+ + +D  D      +Y R +  V  GIKYL E R++DP+  +A RLLYE    +QA
Sbjct:  524 ATFGAVPVSGFNFFRLMKKGEAVLLFPGGVREAFKRKNEEYKLFWPSKPEFVRMAIKHNALIVPFAAVGAEDSIDIVADATDLLNAPLGIGDSVRERSQKVPTARSVDTRVTTDAGEEELFIQPVVTPK---APQRFYFRFMAPIDASEIDLNDDVGVNDMYLRVRREVEWGIKYLREEREHDPFKELAPRLLYEAATSSQA 722          
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S2QSI7_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2QSI7_9EUKA)

HSP 1 Score: 172 bits (436), Expect = 3.270e-46
Identity = 89/200 (44.50%), Postives = 127/200 (63.50%), Query Frame = 1
Query:    4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQASNSD 603
            L    GAVPV+ RN+  L++     LL+PGGV+E  H KGE+Y +FWP++ EF+R AA +NAT+VPF+AIG ADS +++ D  DI   P  +GD+V+     +PRAR +   E F+ P+ +PK   +P R YF+FG+P +TT +D RD+ AC+ VY+  + +V  GI+ LL  RD DP+    +RL YE V    A   D
Sbjct:  666 LFQTFGAVPVSGRNLDALMRERMPALLFPGGVREVYHRKGEDYKVFWPQRGEFIRAAAKHNATVVPFSAIGVADSVQMVADAQDILKTPV-LGDNVKQRMQYLPRARDN---ETFVSPVSIPK---MPHRFYFLFGKPFDTTDLDYRDKAACQAVYEEVRRSVEDGIEQLLARRDRDPFKEYPERLFYEVVNNKPAPTPD 858          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1BH14_9STRA6.900e-5246.94Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S4HRM0_9STRA1.260e-5147.67Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2K9L3_9STRA1.420e-4944.33Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
B8BRN2_THAPS2.680e-4846.70AB hydrolase-1 domain-containing protein n=1 Tax=T... [more]
A0A7S3Q0K0_9STRA1.870e-4745.50Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2XNY5_9STRA2.950e-4743.41Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A2P6TRL1_CHLSO7.640e-4747.74Acyltransferase chloroplastic n=1 Tax=Chlorella so... [more]
A0A3M7KUL9_AUXPR2.260e-4645.69Hydrolase_4 domain-containing protein n=4 Tax=Auxe... [more]
A0A1Y5IEX5_OSTTA3.040e-4645.05Alpha/Beta hydrolase protein n=2 Tax=Ostreococcus ... [more]
A0A7S2QSI7_9EUKA3.270e-4644.50Hypothetical protein n=1 Tax=Norrisiella sphaerica... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47455contigH-elongata_contig47455:687..2330 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.3
Seed ortholog evalue3.5e-42
Seed eggNOG ortholog35128.Thaps20950
GOsGO:0003674,GO:0003824,GO:0004144,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010287,GO:0016101,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0019432,GO:0033306,GO:0034308,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046460,GO:0046463,GO:0046486,GO:0071704,GO:1901576,GO:1901615,GO:1903173
EggNOG free text desc.fatty alcohol metabolic process
EggNOG OGs2QQUD@2759,2XC8C@2836,COG0204@1
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_001460.1
COG Functional cat.I
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size609
Cds size603
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47455.11868.1prot_H-elongata_contig47455.11868.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47455 687..2324 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930783.8249176-CDS-H-elongata_contig47455:686..9231622930783.8249176-CDS-H-elongata_contig47455:686..923Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 687..923 -
1691679568.6078281-CDS-H-elongata_contig47455:686..9231691679568.6078281-CDS-H-elongata_contig47455:686..923Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 687..923 -
1622930783.8400593-CDS-H-elongata_contig47455:1260..14051622930783.8400593-CDS-H-elongata_contig47455:1260..1405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 1261..1405 -
1691679568.6185925-CDS-H-elongata_contig47455:1260..14051691679568.6185925-CDS-H-elongata_contig47455:1260..1405Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 1261..1405 -
1622930783.8603277-CDS-H-elongata_contig47455:1774..18811622930783.8603277-CDS-H-elongata_contig47455:1774..1881Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 1775..1881 -
1691679568.6265466-CDS-H-elongata_contig47455:1774..18811691679568.6265466-CDS-H-elongata_contig47455:1774..1881Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 1775..1881 -
1622930783.8772418-CDS-H-elongata_contig47455:2210..23241622930783.8772418-CDS-H-elongata_contig47455:2210..2324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 2211..2324 -
1691679568.6340237-CDS-H-elongata_contig47455:2210..23241691679568.6340237-CDS-H-elongata_contig47455:2210..2324Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47455 2211..2324 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930783.9005268-UTR-H-elongata_contig47455:2324..23301622930783.9005268-UTR-H-elongata_contig47455:2324..2330Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47455 2325..2330 -
1691679568.6415892-UTR-H-elongata_contig47455:2324..23301691679568.6415892-UTR-H-elongata_contig47455:2324..2330Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig47455 2325..2330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47455.11868.1

>prot_H-elongata_contig47455.11868.1 ID=prot_H-elongata_contig47455.11868.1|Name=mRNA_H-elongata_contig47455.11868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp
MAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKS
EFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAAD
MMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDA
CRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQASNSDH
*
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mRNA from alignment at H-elongata_contig47455:687..2330-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47455.11868.1 ID=mRNA_H-elongata_contig47455.11868.1|Name=mRNA_H-elongata_contig47455.11868.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1644bp|location=Sequence derived from alignment at H-elongata_contig47455:687..2330- (Himanthalia elongata Himel1 dioecious)
GAGCTCATGGCCAAGCTCGGAGCCGTGCCCGTGACACCTAGGAACATGGT AAAACTCCTCAAGGCCGGCGATGATGTGCTGCTGTATCCAGGAGGGGTAA AGGAAGCACTCCACCTAAAGGTCTATTCGGCAGTGATGACCACCCATCGG TCAATCAAGTTTCATAAAAGTGCCGAGCTTTGCGTCACAAGGTTCTGTGG ACAGCCGCCTGTCAGCTAGCGATGGTTGGATTCGTCGCTAGGAGTCGCAG AAAGCAAACGACTCATATAAATATATTGCTGCTGCGTGAGCGCCGGGACA TTGGCCATATCCCGTGCTTCCTGATAGAGCTGTAGAGCTTGTACTCATCC AGGGCAAGACTGATCGATAGACACCGCAGTGACCCATTTACGGCATAGAA AAGAACGGCTCCCCTCTGTATTTTATCGCGGCTTTTCAACAACTCGCAGG GTGAAGAATACCATATGTTCTGGCCAGAAAAGAGCGAGTTCGTGCGTATG GCAGCATCTTACAATGCCACCATCGTACCGTTCGCTGCTATAGGGTCAGC CGACAGGTGCGACCGAGAGGACTCCACACCGTCCTCGGATCCTTGATACA CTTCACACAACAAGTTCTCATCATCTTGCAAGGTTATCGTTCAACATTAG GTGTAGACTCCGCTAGAAGAGCTAAGAGTTTGTTTTTGTATTTTCGGCGA ACCGCGCGTCTTTCGTCTTTCACATGAACCGATACAGTCGCGCAACGCTC TCGAGACCTGCTCGGAAGTGGGCGACAGATATAACGACACATTATAACCG ACGATGTGGTCCCGGTACTTTTTTTTTCTAAGGCGTTCGTTTCGAACTTC CCCAGTCGATCGAGTCAATCAAGGTCTCGCGTGGTTATGGTGCGCTAGTC TGACGCTTTTCCCCCTACCGTTCAGCGCTGAAATTTTGATGGACGTGGGC GATATTTTTGGGCTGCCGTTTGGAGTGGGAGATAGCGTGCAGGATGCAGC GGATATGATGCCCCGCGCACGTCAGGACGACCAAAGTGAATACTTCTTGC CACCTCTTATGGTTCCCAAGGTAAGCTTCGTCGTGCTCATTCCTCTTGCG GTTTATAAACTGCTGCGCCTGAGGTTGTGGATTCTATTGTGTGAGATCAC CCCTTGCACAATATAGTTTTCATGCCGTTTTGCTCTAAAAAAGGTTCCGC AACATTTTACTGCTCTTCAGAGCATTCATTCGTGTATACGAGGAAGAGCG TTTTTGGACTATTATACCGACTCCTATATCAATAAAAGCTCAAAAATTTA TGCCGACCTGGCGACGGTGCGGGATAAAGTGCCGACGACACTTTTGACCT CGCTTACTTTTCTGCGCAAGGCGCCGAAATCCGCACTCCTTCTGTGCTTT CGCCGAGTTTCCCAAGGTACCAGCACGACACTACTTCGTTTTTGGACGAC CGATCAACACAACGTTCGTAGATGAAAGGGACCGAGACGCATGTCGCAGG GTGTACGACCGAACAAAATCTACTGTTAGCCGGGGAATAAAATATTTACT AGAGGCGCGCGATTACGACCCATATGGCAACATCGCCAAGCGTCTTTTGT ACGAGACAGTCATGAGGACCCAGGCAAGTAATTCCGACCATTAA
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Coding sequence (CDS) from alignment at H-elongata_contig47455:687..2330-

>mRNA_H-elongata_contig47455.11868.1 ID=mRNA_H-elongata_contig47455.11868.1|Name=mRNA_H-elongata_contig47455.11868.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1206bp|location=Sequence derived from alignment at H-elongata_contig47455:687..2330- (Himanthalia elongata Himel1 dioecious)
ATGGCCAAGCTCGGAGCCGTGCCCGTGACACCTAGGAACATGGTAAAACT
CCTCAAGGCCGGCGATGATGTGCTGCTGTATCCAGGAGGGGTAAAGGAAG
CACTCCACCTAAAGATGGCCAAGCTCGGAGCCGTGCCCGTGACACCTAGG
AACATGGTAAAACTCCTCAAGGCCGGCGATGATGTGCTGCTGTATCCAGG
AGGGGTAAAGGAAGCACTCCACCTAAAGGGTGAAGAATACCATATGTTCT
GGCCAGAAAAGAGCGAGTTCGTGCGTATGGCAGCATCTTACAATGCCACC
ATCGTACCGTTCGCTGCTATAGGGTCAGCCGACAGGGTGAAGAATACCAT
ATGTTCTGGCCAGAAAAGAGCGAGTTCGTGCGTATGGCAGCATCTTACAA
TGCCACCATCGTACCGTTCGCTGCTATAGGGTCAGCCGACAGCGCTGAAA
TTTTGATGGACGTGGGCGATATTTTTGGGCTGCCGTTTGGAGTGGGAGAT
AGCGTGCAGGATGCAGCGGATATGATGCCCCGCGCACGTCAGGACGACCA
AAGTGAATACTTCTTGCCACCTCTTATGGTTCCCAAGCGCTGAAATTTTG
ATGGACGTGGGCGATATTTTTGGGCTGCCGTTTGGAGTGGGAGATAGCGT
GCAGGATGCAGCGGATATGATGCCCCGCGCACGTCAGGACGACCAAAGTG
AATACTTCTTGCCACCTCTTATGGTTCCCAAGTTTCCCAAGGTACCAGCA
CGACACTACTTCGTTTTTGGACGACCGATCAACACAACGTTCGTAGATGA
AAGGGACCGAGACGCATGTCGCAGGGTGTACGACCGAACAAAATCTACTG
TTAGCCGGGGAATAAAATATTTACTAGAGGCGCGCGATTACGACCCATAT
GGCAACATCGCCAAGCGTCTTTTGTACGAGACAGTCATGAGGACCCAGGC
AAGTAATTCCGACCATTAATTTCCCAAGGTACCAGCACGACACTACTTCG
TTTTTGGACGACCGATCAACACAACGTTCGTAGATGAAAGGGACCGAGAC
GCATGTCGCAGGGTGTACGACCGAACAAAATCTACTGTTAGCCGGGGAAT
AAAATATTTACTAGAGGCGCGCGATTACGACCCATATGGCAACATCGCCA
AGCGTCTTTTGTACGAGACAGTCATGAGGACCCAGGCAAGTAATTCCGAC
CATTAA
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