mRNA_H-elongata_contig47455.11868.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S1BH14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BH14_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.900e-52 Identity = 92/196 (46.94%), Postives = 128/196 (65.31%), Query Frame = 1
Query: 4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQA 591
L K GAV VTPRN +L++ G LL+PGGV+E H K E Y +FWPEK++FVR+AA +NATI+P +A+G+ADS IL+D D+ LPFG+G+ + +++ P AR D E F+ P +P +PARHYFVFG+P + VD RD +AC R+Y T+ + RG +L AR++DPY +RL+ E QA
Sbjct: 467 LFQKFGAVEVTPRNYYRLMQTGQAALLFPGGVREVFHGKDEAYKLFWPEKTDFVRIAAKFNATIIPVSAVGAADSVNILIDPPDMLNLPFGLGERLANSSAAAPIARFDRAEERFVAPFALPN--GLPARHYFVFGQPRDAGSVDHRDAEACARLYRETREELERGFDDVLRAREHDPYREAGRRLVEERARGRQA 660
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S4HRM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HRM0_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.260e-51 Identity = 92/193 (47.67%), Postives = 132/193 (68.39%), Query Frame = 1
Query: 4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGD-SVQDAADMMP-RARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETV 576
L GAV VTPRN +L++ G + LL+PGGV+E H K E + +FWPEK +FVR+AA +NAT+VP +A+G+ADS IL+D DI LPFG+G+ + ++A++M R D+QSE F PP +PK +PARHYFVFG P++T +D D++ C YD KS + RG +L+AR+ DP+ + A+R+ +E V
Sbjct: 521 LFETFGAVMVTPRNYYRLMQTGQNALLFPGGVREVFHGKDEAHQLFWPEKVDFVRIAAKWNATVVPISAVGAADSVNILIDAPDILKLPFGIGERAANNSANVMSARFDGDEQSELFQPPFALPK--PLPARHYFVFGTPMDTEHLDHSDKEGCENFYDNVKSEMMRGFDDILQARENDPWKDTARRIAFEQV 711
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S2K9L3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K9L3_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.420e-49 Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 1
Query: 4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQ--SEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVM 579
L GAV VTP+N +L++ G LL+PGGV+E H K E Y + WPEK++FVR AA +NATI+P +A+G+ADS IL+D D+ LPFG+GD + +++ + AR D SE F P +PK +P RHYFVFG+PI T +D +R +C +Y+ K ++RG +L+AR+ DPY R+ YE +
Sbjct: 312 LFETFGAVRVTPKNYYRLMQTGQAALLFPGGVREVFHGKNEAYQLMWPEKTDFVRTAAKFNATIIPLSAVGAADSVNILIDAPDMLNLPFGLGDRIANSSSSIMAARYDGDKSSELFAAPFAIPK--PLPDRHYFVFGKPIYTNEIDHLNRTSCDAIYEEVKDEMNRGFSDVLKAREKDPYRGSLTRIAYEQAL 503
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: B8BRN2_THAPS (AB hydrolase-1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRN2_THAPS) HSP 1 Score: 178 bits (451), Expect = 2.680e-48 Identity = 92/197 (46.70%), Postives = 136/197 (69.04%), Query Frame = 1
Query: 1 ELMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEK-SEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQS--EYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYG-NIAKRLLYETVM 579
+L + GAV VTP+N +LL+ VLL+PGGVKEALH KGE+Y +FWP+K ++FVR+AA +NATIVP +AIG+ADS +I++D ++ LPFG+GD++++ AR D Q E F+PPL VPK PARHYF+FGR +T+ +D +++DAC+ +Y+ ++ + I LL AR+ DP+ + KR Y+ +
Sbjct: 636 DLFSMFGAVKVTPKNFYRLLQTNQAVLLFPGGVKEALHGKGEDYEVFWPDKKTDFVRVAARFNATIVPISAIGAADSVDIVLDAKELLDLPFGIGDNLKNFNANATSARYDTQDGEELFVPPLAVPK--PFPARHYFLFGRAFDTSSIDPQNKDACQTMYEEIENELRSDIDALLAARERDPFALDGGKRAWYQRLF 830
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S3Q0K0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K0_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.870e-47 Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 13 KLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPE-KSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRAR--QDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQASNSD 603
+ GAV VTPRN +L++ G LL+PGGV+E H K E Y +FWPE K +FVR A+ +NATIVP +A+G+ADS IL+D D+ LPFG+G+ + + AR QD+ +E F PP++ FPK+PARHYFVFG+P +T +D R+ + C ++Y K + RG+ LL AR+ DPY + R+ E V A D
Sbjct: 543 QFGAVMVTPRNYYRLMQTGQTGLLFPGGVREVFHGKDEAYELFWPEDKLDFVRTASRFNATIVPISAVGAADSLNILVDSPDVLDLPFGIGERAANQTKNVMSARFDQDNTAELFQPPVI---FPKIPARHYFVFGKPFDTENIDHRNAEECTKLYAGVKGELRRGLDDLLVARENDPYKDTPMRIAVEKVSGKPAPTFD 739
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S2XNY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNY5_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.950e-47 Identity = 79/182 (43.41%), Postives = 119/182 (65.38%), Query Frame = 1
Query: 55 LLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAA--DMMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQAS 594
+++ G + LL+PGGV+E H K E Y +FWPEK +FVR+AA +NAT+VP +A+G+ADS IL+D DI LPFG+G+ +++ + R +++ E F PP +PK +PARHYFVFG+P++T V+ +D+ AC Y K + RG +L AR+ DP+ N A RL +E + +A+
Sbjct: 1 MMETGQNALLFPGGVREVFHGKDEAYQLFWPEKVDFVRIAARFNATVVPLSAVGAADSVNILIDAPDILKLPFGIGERAANSSANTISARFNVNNEGELFQPPFALPKL--LPARHYFVFGKPMSTENVNYKDKAACDDFYQNVKGEMQRGFDDVLRAREKDPFKNTASRLRHEVLTGKKAA 180
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A2P6TRL1_CHLSO (Acyltransferase chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TRL1_CHLSO) HSP 1 Score: 173 bits (438), Expect = 7.640e-47 Identity = 95/199 (47.74%), Postives = 126/199 (63.32%), Query Frame = 1
Query: 1 ELMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQ-----DDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMR 582
E M+ GAVPV+ +NM +LL+ + VLL+PGGV+EA +GEEY +FWPEKSEF+RMAA + ATIVPFAA+G DS I+ D + +P +GD V+ A +P+AR+ + E F+ PL PK P P R YFVF +PI T+ D +DR C +Y TK++V GI +LL+ R DPYG R LYE R
Sbjct: 514 EFMSTFGAVPVSAKNMHRLLQNKEAVLLFPGGVREAYKRRGEEYQLFWPEKSEFIRMAARFGATIVPFAAVGVDDSLNIIADSQQLEAMPV-LGDMVKRRAGGLPQARKGVAAASFEEESFVAPLATPKLP--PGRLYFVFQQPIQTSPEDLKDRQRCDDMYRATKASVEEGIAWLLQKRKQDPYGEFLPRQLYEAAYR 709
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A3M7KUL9_AUXPR (Hydrolase_4 domain-containing protein n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KUL9_AUXPR) HSP 1 Score: 171 bits (432), Expect = 2.260e-46 Identity = 90/197 (45.69%), Postives = 129/197 (65.48%), Query Frame = 1
Query: 1 ELMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQ-----SEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETV 576
+++ GAV V+PRNM +LL G+ +LL+PGG++EA +GEEY +FWP++SEFVRMAA + ATIVPFAA+G DS IL+D + LPF VGD+++ ++P+AR S+ F+PP+ +P+ P R YF+F PI+T + RDR AC ++ R K +V GI +LL+AR DPY RLL E++
Sbjct: 427 QMLETFGAVRVSPRNMFRLLSNGEAILLFPGGMREAYKGRGEEYRLFWPDRSEFVRMAARFGATIVPFAAVGIDDSLNILLDPSQVQALPF-VGDALRRRQALLPQARSGPMADAGWSDGFVPPVSIPR--GAPQRLYFLFQAPIHTDPSEARDRQACDALHSRIKGSVQEGIDFLLQARTGDPYAAATSRLLRESL 620
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A1Y5IEX5_OSTTA (Alpha/Beta hydrolase protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IEX5_OSTTA) HSP 1 Score: 171 bits (434), Expect = 3.040e-46 Identity = 91/202 (45.05%), Postives = 123/202 (60.89%), Query Frame = 1
Query: 10 AKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDD--------QSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQA 591
A GAVPV+ N +L+K G+ VLL+PGGV+EA K EEY +FWP K EFVRMA +NA IVPFAA+G+ DS +I+ D D+ P G+GDSV++ + +P AR D + E F+ P++ PK P R YF F PI+ + +D D +Y R + V GIKYL E R++DP+ +A RLLYE +QA
Sbjct: 524 ATFGAVPVSGFNFFRLMKKGEAVLLFPGGVREAFKRKNEEYKLFWPSKPEFVRMAIKHNALIVPFAAVGAEDSIDIVADATDLLNAPLGIGDSVRERSQKVPTARSVDTRVTTDAGEEELFIQPVVTPK---APQRFYFRFMAPIDASEIDLNDDVGVNDMYLRVRREVEWGIKYLREEREHDPFKELAPRLLYEAATSSQA 722
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Match: A0A7S2QSI7_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2QSI7_9EUKA) HSP 1 Score: 172 bits (436), Expect = 3.270e-46 Identity = 89/200 (44.50%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 4 LMAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSEFVRMAASYNATIVPFAAIGSADSAEILMDVGDIFGLPFGVGDSVQDAADMMPRARQDDQSEYFLPPLMVPKFPKVPARHYFVFGRPINTTFVDERDRDACRRVYDRTKSTVSRGIKYLLEARDYDPYGNIAKRLLYETVMRTQASNSD 603
L GAVPV+ RN+ L++ LL+PGGV+E H KGE+Y +FWP++ EF+R AA +NAT+VPF+AIG ADS +++ D DI P +GD+V+ +PRAR + E F+ P+ +PK +P R YF+FG+P +TT +D RD+ AC+ VY+ + +V GI+ LL RD DP+ +RL YE V A D
Sbjct: 666 LFQTFGAVPVSGRNLDALMRERMPALLFPGGVREVYHRKGEDYKVFWPQRGEFIRAAAKHNATVVPFSAIGVADSVQMVADAQDILKTPV-LGDNVKQRMQYLPRARDN---ETFVSPVSIPK---MPHRFYFLFGKPFDTTDLDYRDKAACQAVYEEVRRSVEDGIEQLLARRDRDPFKEYPERLFYEVVNNKPAPTPD 858 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47455.11868.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig47455.11868.1 >prot_H-elongata_contig47455.11868.1 ID=prot_H-elongata_contig47455.11868.1|Name=mRNA_H-elongata_contig47455.11868.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=201bp MAKLGAVPVTPRNMVKLLKAGDDVLLYPGGVKEALHLKGEEYHMFWPEKSback to top mRNA from alignment at H-elongata_contig47455:687..2330- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig47455.11868.1 ID=mRNA_H-elongata_contig47455.11868.1|Name=mRNA_H-elongata_contig47455.11868.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1644bp|location=Sequence derived from alignment at H-elongata_contig47455:687..2330- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig47455:687..2330- >mRNA_H-elongata_contig47455.11868.1 ID=mRNA_H-elongata_contig47455.11868.1|Name=mRNA_H-elongata_contig47455.11868.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1206bp|location=Sequence derived from alignment at H-elongata_contig47455:687..2330- (Himanthalia elongata Himel1 dioecious)back to top |