mRNA_H-elongata_contig46862.11784.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46862.11784.1
Unique NamemRNA_H-elongata_contig46862.11784.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A6A3K5Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K5Y5_9STRA)

HSP 1 Score: 215 bits (548), Expect = 8.680e-56
Identity = 198/710 (27.89%), Postives = 305/710 (42.96%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEM-DMDQPGHTPKRVKMDDVAYVPGISRNLLSTLK------PVEQWEKPLIYYRDKAVLGFPEDESLAFNF-CPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMM-GIGTTGQW--GACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEAFLKHE------QEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEAD--------------------VEDALACD--------DGGQMAMHATLD-------------------IQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSGAT HM+  R+ +  Y+  +  M V I+DG  L V G G + +  +DQ      R+KM DV ++PG+ R LLS  K       VE      + + D + +   +    A+   C ++    V       + E+            H  + HP++D   KT     GI   GQ     C  C + K      PK +  + S   +    DV GPMK +S GG  Y++ FVDD++R+ VV F+K+KS+  + L   +  Y       +  +R+DNG EF   +  R      I H+ T P +PQ NGVAER    + EKA +++    +  +VP E  WA+A+  A  + N+S  T    V +PYEL F   PT +HLR FG+ GYA     ++ K+ PK  +C F+G   N      F      V +T+   L         +    + G    VS  A       P  RK  ++  +  +         P     E   +C  PT+ E D                    +ED    +        DG      A +D                   +  P    QAM + +   WR+A + E+     N  +  V R      +G + ++ +K  Q G+VV+YK RLV +GF Q  G+ + E YSP     SIR++L+  AA +  +   D++ AFL + + + +Y+
Sbjct:  164 DSGATAHMTPHRSDLLEYEALNTTMEVTIADGKKLTVAGRGTVRLLGLDQ-----NRIKMVDVLHIPGLDRRLLSVGKLAERDLNVEPQRFSCVIWGDVSAIALGKKVGKAYVLDCDQEEARFVEYAGADSQWEL-----------WHARMGHPNKDALAKTQRATNGIPDVGQAFPTLCGGCMKGKQTVEVFPKRSKTKTSRVLELVHTDVMGPMKSTSKGGAKYILTFVDDFSRYVVVYFLKKKSEVASKLKEFMRFYEKQWGERLMCLRSDNGTEFVTKDVARICTLNGIMHQRTVPYSPQQNGVAERVNRTIMEKARSML----HYKSVPTE-WWAEAVSTAVYLINRSTNTQHTSV-TPYELGFKVKPTLEHLRVFGSHGYAHIDKAKRTKLEPKSFRCMFLGYADNVKGYRVFDLDASKVKVTRSVKLDERAVDGIYETLPARNGTVIRVSEDAHDAVTPAPVERKPAVEEPMEGVENDAPDRNDPPPTGLELAPYCAPPTVFEDDRVVFHPPVHRSRRAREPVFLLEDGTDAEEERKSEGSDGPPSPKRARIDEDGLLAEAVLAYAASIGDAVDIPTTHAQAMANDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVTKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDSDTAFLNSGLKDRVYM 851          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 215 bits (548), Expect = 1.040e-55
Identity = 193/682 (28.30%), Postives = 295/682 (43.26%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLST-----LKPVEQWEKPLIYY-RDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPRQEV--DRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGA-CKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLL---TQEAFL---------------KHEQ-------------EQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEAD--VEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSGAT HM+  +  +  Y +      V + D  T+   G G   +  D      + + + +V Y+P + +NLLS      L  + Q++       R+  +L   E     +      G+  +   R  P + +   R   L  NG         S+ I     E M     G+  + C++C   K  R   PK T  RAS   +    DV GPM   S G + Y V F+DDY+++  V F+K K +        ++ Y+ +    +K +R+DNGGE+  + F+  L    I H+ T P  P+ NG AER    L E A ++M        +P+E  WA+A+  A    N+S T S +   +P+E  F   P   +L+ FG + Y      ++ K+  K  KC F+G    +P GT    L   T++ F+               K+EQ             E  Q     G V   AD E   +    +  ++ NVP    +     R   N    V +   P    A    E+   C D        T DI EP+N  +A  +     W+KA + E   +++N  ++ V    DK +VG++ ++K K   DG V K+K RLVAQG+ Q EG+ Y E +SP     SIR LLA A   D E+   D   AFL  D+ +E+Y+
Sbjct:  304 DSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLSVQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGI--------SKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYM 960          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 203 bits (517), Expect = 6.300e-52
Identity = 185/665 (27.82%), Postives = 303/665 (45.56%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDM---DQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTG---VRRIPRQEVDRGARLAENGSV--HRMLAHPS-EDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA---LPALRKLT-IDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALAC------------DDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSGAT HM+  R  +S Y +     +V + D  ++   G G   +     D+  H    V + +V Y+P + +NLLS    V+         RD A + F E++           +  + G   V  I ++ V+   +  +      H  L H    ++ +   E M  G        + C + K  R   PKT D RAS   +    DV GPM   SLGG+ Y V F+DDY+R+  V F+K KS+            +      IK + +DNGGE+   EF+  L +  I H+ + P  P  NGVAER    +    +   + + +  ++P E  WA+A+  +  V N+S T + + + +PYE  F   P   +LR FG + Y      ++ K+  K  K  FMG P       +   ++++     +    +K+     +  S++ +  A   +P + + T +DGN      +  R        ++A       T EE  + +                D+   +A   T DI EP N  +A       +W++A + E   +++N  ++ V+  K K VVG+K ++K K  ++G V +YK RLVAQG+ Q EGV Y+E +SP     +IR LLA + AK+ E+   D + AFL  +++EE+Y+
Sbjct:  301 DSGATQHMTFERNRLSNYVEFKRPCSVNLGDNRSILAYGKGTYHVKAVVNDRIQH----VALQEVLYLPELDKNLLSVHAMVK---------RD-ATVTFKENKCEISRNLKILAVGEIQGKLYVLNIVKEHVNIAKQQPDTDRYLWHCRLGHLGMNNVNKLINENMVSG--------EACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYM 937          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: B1PJ47_PHATR (Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B1PJ47_PHATR)

HSP 1 Score: 202 bits (515), Expect = 2.080e-51
Identity = 199/727 (27.37%), Postives = 325/727 (44.70%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGM-TVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPR--KGLFSVTGVRRIPRQ----EVDRG-------------ARLAENGSV----------------HRMLAHPSEDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTA-DHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTV--------SVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA------------LPALRKLTI---------------DGNVPPMLPS-RTRSRRPHTNVEEAVMHCFL---PTIEEADVEDALACDDGGQMAMHATLDIQ------EPKNR-RQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSK----DKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLA-TAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSGA+ H      GM  Y   SP +  V + +G    ++  G I     Q   T   ++  ++ +VP +++NLLS  + ++    P  + ++   L   ++       CPR   G++ +   R  P+     E +RG             A + + G+                 H  L H  E + +KT +   I  TG+  +C+ C  AKAK+ +V KTT+ RA   G+R FVD+ GP   + LG   Y +  VDD TR   + FVK++SD +  L   +   +   +   KY+R DN GE +   ++  D++ +T E T PDTPQ NGV ER + +L+++A A+M   D +    R  LWA+A+  A D+ N S+ T +D  KSP +L+   +    D L  FG +GYA  R   K K   K  +   +G  +N    T         S++ +++      +    K   +  V     L+ P             +P + ++ I               D  VP +  S   R+ +  + +E  +    +   PT +EA  +  +   +     +H   + +      EPK    +A+  PE + W  +   EI   +    +K+V RS+     K ++ TK ++K+K  QDG   +YK R+V +GF QI GV Y+E +SP     S+R+ +A T A  D  +   D E AFL   +D + YI
Sbjct:  404 DSGASGHTFKNAQGM--YNIKSPIIKNVIVGNGVNCKIEKSGSISF---QDSETKTIIEATEIHHVPNMTKNLLSLSRLIDDGWNPQ-FTKEALFLERVQNGQQKRIKCPRYSDGMYYLEAKRVNPQDVNIAETERGGQKVSETTWRDVTAEIDDKGNTKGQKHVKIKSMDINEAHDKLGHKGEVLLKKTLKHHSIKVTGELQSCEGCCLAKAKQKSVSKTTNIRAKSPGERLFVDMSGPFTATILGSR-YQIQVVDDATRKGFIGFVKKRSDLSQWLEENVLSKLEGMQKQTKYLRADNAGENKNPLEKLCDKKGMTLELTAPDTPQQNGVVERRIAVLQQRANAMMMAAD-LTPEARALLWAEALNTANDLENISLNTMSD--KSPDKLFSNELTKLMDRLVEFGRIGYATIRRKFKGKWKEKSLRVIMVGYAKNHSADTYRLYNPQNKSIIESRDVVWSDWKRPDPKRTLSIFVKDPDTLKEPVGIDDKEFVSEVKMPEIPQVNIPEDAAPDTAAGRNVGDAAVPVVQESDEERAAKIASRLEREMRKLDVSWNPTAKEAMEKPTVVEQNNRSKQVHFVFNTELSSDHGEPKELLSEALVGPEKEKWLPSAVNEIMNFISRGSWKKVPRSQARKSGKTILPTKWVFKKKDEQDG-TTRYKSRIVTKGFMQIPGVDYSESFSPVANDTSVRIGIAKTLANNDWVIEVIDIEAAFLEGQLDRDTYI 1119          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 198 bits (504), Expect = 3.340e-50
Identity = 153/502 (30.48%), Postives = 245/502 (48.80%), Query Frame = 1
Query:  469 MMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSL--IADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA---LPALRKLT-IDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALAC------------DDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            M G+  T +   C+ C + K  R   PKT D RAS   +  + DV GPM   SLGG+ Y V F+DDY+R+  V F+K KS+           A  IT +   IK +R+DNGGE+   EF+  L +  I H+ + P  P  NGVAER    +    +   + + +  ++P E  WA+A+  +  V N+S T + + + +PYE  F   P   +LR FG + Y      ++ K+  K  K  FMG P       +   ++++     +    +K+     +  S++ +  A   +P + + T +DGN      +  R        ++A       T EE  + +                D+   +A   T DI EP N  +A       +W++A + E   +++N  ++ V+  K K VVG+K ++K K  ++G V +YK RLVAQG+ Q EGV Y+E +SP     +IR LLA + AK+ E+   D + AFL  ++ EE+Y+
Sbjct:  357 MDGVSNTNENQFCEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKP--IKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYM 849          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A445JBB1_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445JBB1_GLYSO)

HSP 1 Score: 199 bits (505), Expect = 3.940e-50
Identity = 173/628 (27.55%), Postives = 285/628 (45.38%), Query Frame = 1
Query:   79 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPR----QEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTTG---QWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVR-KHKMAPKGEKCAFMGIPRNF------PTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            V  +D  T+ V+G G++ M   + G       +  V YVPG+  NLLS  + +E+  + ++   DKA+  +  + +L       KG+ S   + +I      Q+    A   E    H    H +  D+ R  ++ +  G          C  C ++K  R A       R+  K Q  F DV GP++H +  GN Y V F+DD+TR   +  +KRK++                  +I+ +RTD GGE+   EF    +   ITHE TPP TPQ+NGVAER    L     +++K      N+P+   W +A+  A  + N+S T   + + +P E W G  P   H R FG++ Y     + + K+  KGE    +G           P     V+     F +    +  ++GE+ +       + PA     +  I+G   P+  +      P               + + ++    A DD G +   A L   EP   ++AM++ +W    +A + E+R +  N  ++ V   K K  +G K +YK KV   G+VVKYK RLVA+GF Q  GV Y E ++P     ++R+++A A+ +  ++   D + AFL  +++EE+Y+
Sbjct:  386 VRFADDRTMKVEGVGKV-MIRKKDGSL---CYITGVLYVPGMKSNLLSIGQLLEKGYRMVL--EDKAMKVYDTEHNLLM-----KGILSNNRIFKIELGMLLQQCLATAVDKEEWLWHFRYGHLNFGDLNRMQSKAIVKGLPHIHVPKDVCAECMESKMSRGAFNPNVPSRSKRKLQVIFSDVCGPIQHETPAGNKYFVTFIDDFTRKLWIYLIKRKNEVLGVFKKFKVLVEKQSGQNIEILRTDGGGEYVSTEFDEYCENEGITHEVTPPYTPQHNGVAERKNRTLLNMVRSMLKSK----NMPK-MWWGEAVNTAAYIINRSPTKKMENI-TPEEAWTGVKPNVSHFRVFGSVCYRHVPDQLRTKLDDKGEVMIMVGYHSTGGYKLVNPVNNKIVISRDIVFDEGNAWKWSEKGESSTGVEQNLFDVPA--GETESDIEGETGPVEDNDDEGGSPEMPRRSLRQRQVPARLNDYEIMPDGAIDDEGDLVHFALLAETEPVTLQEAMKNSKW---LEAMKEELRSIEKNLTWELVELPKGKKAIGVKWVYKVKVNPKGEVVKYKARLVARGFLQRHGVDYEEVFAPVARIETVRVVVAHASMQRWKVHQLDVKSAFLNGELEEEVYV 991          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT)

HSP 1 Score: 198 bits (504), Expect = 4.950e-50
Identity = 175/662 (26.44%), Postives = 290/662 (43.81%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRK-GLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGA-CKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGS---------ADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTN-----VEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSGAT HM+  ++ +S Y +      V + D  ++   G G   +  D   H  + + + DV Y+P + +NLLS    V+      + +  +        + LA      K  +  +  V      + D   +L      H  + + ++ +  +  + M     G+  + C+ C   K  R   P    +RA+   +    DV GPM  +S+GG+ Y V F+DDYTR+  V F+K K +  A     +         S+K +RTDNGGE+   EF+  L  + I H+ T P  P  NGV+ER    L E   ++M      +     + WA+A+  A  + N+S TTS   + +PYE  F   P   +LR FG   +A     ++ K   K  K  F+G P        +   T   + +++      +    K+G +G                +E   +PA+    I+G+   ++         H        EE  M       ++         DD   +A + T DI EP + ++A       +W++A + E   ++ N  ++ V   K K +VG++ ++K K   DG V ++K RLVAQG+ Q +G+ Y E +SP     SIR LLA A   D E+   D + AFL  ++DE +++
Sbjct:  292 DSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADLGDHV-QNISLRDVLYLPDLEKNLLSVRAMVKLGAN--VRFEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKEI-TPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIGYPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAV---VIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFM 941          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A8J6HA52_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HA52_TENMO)

HSP 1 Score: 197 bits (500), Expect = 1.630e-49
Identity = 182/705 (25.82%), Postives = 304/705 (43.12%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPED--ESLAFNFCPRKG-----LFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTT----GQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKH-KMAPKGEKCAFMGIP------RNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPS-------RTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHA----------------------------------------TLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSGAT HMS+  +     +K      V +++G +  V G GR E+          +V +++V YVP ++ NLLS  +  +              +GF  +  E    N    KG     ++ +T   R    + ++     ++ S HR   H   ED+ +   + M  G      G    C+ C + K  R  +PK    RA+   +    D+ GPM++++  G  Y +  +DDY+RF  V F+K KS+ +  +   I       E  +K +R+DNG E+   E QR L    I  ++T P +   NGVAER    L E A  ++ + +      ++K WA+A+  AC + N   + + D  K+P+ELW    P   HL  FG  GYA     K  K+  K     F+G        R   T T  + ++++  +     ++++E E GS   +   E   +   R    D N P               S     N ++  ++    ++ E +   +LA D   + ++ A                                          D +EPKNR +A+   +  DW +A   E++ + +N  +   T  + +  +G K ++KRK   +  ++KYK RLVAQGF Q  G  Y E ++P     ++R+LLA A  +  ++ HFDA+ AFL  ++ E +Y+
Sbjct:  274 DSGATSHMSNDESFFKTLEKRKM-RDVTVANGESAKVLGIGRGELHCLNGKDEAVKVCLENVLYVPDLTENLLSVKRLAKTGHS----------VGFTGEQCEISKNNIVIAKGKLSPDMYELTVPHRSLAVKQNQHTPNCQH-SWHRRFGHRHPEDVQKLEIKKMATGLKIQDCGIREVCECCIKGKMSRCPIPKKATTRATSVLELVHTDLCGPMQNATPSGKRYFMTMIDDYSRFTQVYFLKFKSEVSKFINEYIKYAENKFEKKVKVIRSDNGREYITKELQRSLTEMGIKVQYTAPYSAFQNGVAERKNRTLMEAARCMLIDAEI-----KKKYWAEAVNTACYLQNILPSKAVD--KTPFELWNRRKPDVKHLHIFGCKGYAHLPKEKRRKLDEKAISLTFVGYSAESKAYRMLDTATDKITISRDVKIIERDLKREEENEKGSSQENKSTERRKIVENR----DENTPESGQEVNYSEDIEIISENELENEQDQGLNESSESLNEFEETQSLAMDSVLEQSLPAGDEEYVFQGNLDDLNNQEVRVSERPTKGQPPDRFKPQANIVRDHEEPKNRTEALSGVDKHDWIRAMNEEMKALTENSTWVLTTLPEGRKTIGCKWVFKRKKNANTGLIKYKARLVAQGFSQKYGTDYDEVFAPVVRATTLRLLLAIATQRKLKIHHFDAKTAFLNGELKETIYM 955          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A2N9ETQ8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ETQ8_FAGSY)

HSP 1 Score: 192 bits (488), Expect = 6.480e-48
Identity = 183/653 (28.02%), Postives = 282/653 (43.19%), Query Frame = 1
Query:    1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQ--W----EKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKH---KMAPKGEKCAFMGIPRNFP-----TGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            DSG + HM+  +  +    K      V  +D   LP+   G   +    P    K+V ++ V +VPG+ +NLLS  +  +   W     K +  Y++  V+G P  E             S    +    + VD       + S H++    ++ + +   ++     T     C  C   KA +    ++   RA    +    DV G +K SS+ G  Y+V F+DD++R+  V F+K KS+T +  +             IK +RTDNGGE+   EF   L + +I  + T P TPQ NGVAER    L E    + + + +  NVP  + WA+ M  A  + N+      D V SP++  + T P   H R FG + Y    V  H   K   K  +C F+G             T     T    +  E      E +A             LPAL++  I+  +P  +  +    +  T V         P +EE   E+    DD           I+EP    +A +S   +DWRKA E EI  +  N  +  V + KD   +  K +YK K   DG + +YK RLVA+GF Q  G+ Y E +SP     ++R+LLA AA+K  +L   D + AFL  ++D E+Y+
Sbjct:  722 DSGCSNHMTGDKEKLQNMSKYKGKRVVVTADNTRLPIAHIGETLI---SPRFNAKQVPLEQVYHVPGVKKNLLSVAQLADSGNWVLFGPKDVKVYKEIVVIGTPTMEGQRMESVYVMSAESAYVDKTRKNETVDLWHARLGHVSYHKLKVMMNKSLVKGLPQLECREDT----VCAGCQYGKAHQLPYQESKF-RAKEPLELVHSDVFGRVKQSSIKGMRYMVTFIDDFSRYVWVFFMKEKSETLSKFIEFRMKVENEVGKKIKCLRTDNGGEYTSDEFCDYLRKCNIRRQLTCPGTPQQNGVAERKNRHLAE----ICRSMLHAKNVPG-RFWAECMKTAAHIINRLPQARLDFV-SPFQKMWNTKPKVSHFRVFGCVCYV--FVPDHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTTGRCYTSRNVIFDEASSWWSEDKA------------TLPALKE--IEKKMPESMEEQLGKDQSKTGVHHRTPEEDRPRLEEVIEEEEK--DDN----------IKEPSTYEEASQS---EDWRKAMEEEIHALKQNQTWDLVPKPKDVKPISCKWVYKVKTRADGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKSWKLWQMDVKNAFLHGELDREIYM 1329          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 191 bits (485), Expect = 1.460e-47
Identity = 163/569 (28.65%), Postives = 258/569 (45.34%), Query Frame = 1
Query:  418 HRMLAHPSEDITRKTTE---MMGIGTTGQWG---ACKTCFQAKAKRYAVPKTTD-ERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKHKMAPKGEKCAFMG-------------------IPRNF-------------PTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALP---ALRKLTIDGNVPPMLPSRTRSRRPHT----------------------NVEEAVMHCFLPTIEEADVEDALACDDGGQ--MAMHATLDI---QEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
            HR + H S  I  +      + G+  T +      C +C QAK  R  VPK  + +R    G R   DV GP +  +LGG  Y   F DD TR+  +  ++ KS T +A  S  A        +IK +++D GGE+   EF   L         T  DTPQ+NG+AER    L E A A++   +    +P+  LW +AM  A  + N++ T + DG K+P+E+ +G +P    L  FGA  + R      K+  K  +  F+G                   + RN              P G +  ++       H+ +Q+ K         S +   P++P   A  +   D N  P  P+  RS RP                           + +    L      + E++ +  +G +   AM A   +   QEP++  +AM+SP+W  W+KA E E+R + D+  Y  V   ++  VVG+K +++ K   +GK+  YK RLVAQGF QI G+ + + ++P    ASIR++LA AA  D ++   D + A+L AD++EE+++
Sbjct:  529 HRRMGHISPIIAERLVREGRVEGVRLTDKANKEKTCNSCIQAKITRATVPKERESDRTKELGDRVRSDVWGPAQTETLGGKKYFTSFTDDATRWTDLYLLRAKSGTFSAYKSYEAKLKNQDGKTIKALQSDRGGEYLSREFTDHLTTHGTVSRLTVHDTPQHNGLAERINRTLPEHARAMLIAAE----LPKN-LWGEAMMHATWLKNRTSTRALDG-KTPFEVRYGHLPDLGDLHEFGAKVWVRIE-NAGKLDSKAREGRFVGYSTESKGYRVYWPDKRAVSVERNVRFIDETVIADEAQPEGVIEAVVPSSPSTLHQPQQKPKSHTEPPAPSSVNP--PSMPTSDAPAQEHKDENHAPEAPAE-RSHRPRKASAYVKRLNDGSGVADGRKSRPKYPQGLQPGDLMGAAAVEAEESESEQEGDEPIFAMPAAFAVREGQEPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFM 1087          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3K5Y5_9STRA8.680e-5627.89Uncharacterized protein n=4 Tax=Phytophthora rubi ... [more]
A0A7D9IUY0_PARCT1.040e-5528.30Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9D6Q5_PARCT6.300e-5227.82Retrovirus-related Pol poly from transposon TNT 1-... [more]
B1PJ47_PHATR2.080e-5127.37Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornu... [more]
A0A7D9HXK4_PARCT3.340e-5030.48Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A445JBB1_GLYSO3.940e-5027.55Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7HNY1_PARCT4.950e-5026.44Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J6HA52_TENMO1.630e-4925.82Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A2N9ETQ8_FAGSY6.480e-4828.02Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A401GQU1_9APHY1.460e-4728.65Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46862contigH-elongata_contig46862:870..3128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score210.3
Seed ortholog evalue2.6e-51
Seed eggNOG ortholog67593.Physo139458
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs3QH4V@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1914
Cds size1893
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46862.11784.1prot_H-elongata_contig46862.11784.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46862 870..3107 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930774.0705247-CDS-H-elongata_contig46862:869..15561622930774.0705247-CDS-H-elongata_contig46862:869..1556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46862 870..1556 -
1691679564.2741754-CDS-H-elongata_contig46862:869..15561691679564.2741754-CDS-H-elongata_contig46862:869..1556Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46862 870..1556 -
1622930774.0919912-CDS-H-elongata_contig46862:1838..26511622930774.0919912-CDS-H-elongata_contig46862:1838..2651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46862 1839..2651 -
1691679564.2870023-CDS-H-elongata_contig46862:1838..26511691679564.2870023-CDS-H-elongata_contig46862:1838..2651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46862 1839..2651 -
1622930774.1078732-CDS-H-elongata_contig46862:2714..31071622930774.1078732-CDS-H-elongata_contig46862:2714..3107Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46862 2715..3107 -
1691679564.2960753-CDS-H-elongata_contig46862:2714..31071691679564.2960753-CDS-H-elongata_contig46862:2714..3107Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46862 2715..3107 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930774.1236498-UTR-H-elongata_contig46862:3107..31281622930774.1236498-UTR-H-elongata_contig46862:3107..3128Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46862 3108..3128 -
1691679564.304871-UTR-H-elongata_contig46862:3107..31281691679564.304871-UTR-H-elongata_contig46862:3107..3128Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46862 3108..3128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46862.11784.1

>prot_H-elongata_contig46862.11784.1 ID=prot_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=631bp
MSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRV
KMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNF
CPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEM
MGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKH
SSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSI
KYVRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREK
AIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWF
GTIPTADHLRPFGAMGYARRSVRKHKMAPKGEKCAFMGIPRNFPTGTVSV
LLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPM
LPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLD
IQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGT
KMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRML
LATAAAKDGELRHFDAEQAFLTADIDEELYI
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mRNA from alignment at H-elongata_contig46862:870..3128-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46862.11784.1 ID=mRNA_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2259bp|location=Sequence derived from alignment at H-elongata_contig46862:870..3128- (Himanthalia elongata Himel1 dioecious)
GACTCAGGCGCCACATTCCACATGTCGCACACCCGGGCCGGAATGTCTGC GTACAAGAAAGCGTCGCCGGGGATGACCGTTGAGATCTCTGACGGGAACA CTCTACCGGTGGACGGGTTCGGAAGAATTGAGATGGATATGGACCAACCG GGTCACACACCCAAGAGAGTGAAGATGGACGATGTTGCGTATGTGCCAGG AATTTCGCGGAACCTGCTATCTACCCTCAAACCAGTGGAGCAATGGGAGA AACCACTAATATATTACAGGGACAAAGCCGTTTTGGGGTTCCCGGAAGAC GAATCGCTTGCTTTCAACTTCTGCCCCCGTAAAGGATTATTTTCAGTTAC AGGCGTGAGACGGATCCCGAGGCAGGAGGTGGATCGAGGAGCAAGATTGG CGGAGAACGGATCGGTGAGGATCGTTTCGGGAACGGCGCTAGCAATAAGA GCAGGGGGAACCCGTGACGTTATGGAGGTTCATCGCATGCTAGCGCACCC GAGCGAGGACATAACGAGAAAGACAACCGAGATGATGGGGATTGGAACGA CGGGTCAGTGGGGGGCATGCAAGACGTGTTTCCAGGCGAAGGCGAAGCGA TATGCCGTGCCAAAGACGACGGACGAGCGGGCTAGCGTTAAAGGACAGCG GTTCTTTGTCGACGTGGGTGGGCCGATGAAGCACTCGAGTCTCGGCGGGA ACAGCTACGTCGTCATTTTTGTGGATGACTACACCCGTTTCAAGGTGGTA AAGTTCGTTAAAAGGAAGAGTGATACAACGGCCGCGCTTTTGTCTTTGAT TGCAGATTATATCACCTCGCAGGAGCTGTCGATCAAGTACGTACGGACCG ATAATGGTGGTGAGTTTGAGGGGGAATTTCAGCGCGAACTAGACCGGCGC AGCATCACGCACGAGCATACCCCGCCAGACACGCCACAGTACAACGGGGT GGCCGAACGCGCGCTTGGACTTTTACGAGAAAAGGCGATCGCCTTAATGA AGGAGTTAGACAACATCATCAACGTGCCGCGAGAGAAGTTGTGGGCTCAG GCAATGTTTTTCGCGTGTGACGTCACCAACAAGTCAGTCACGACGTCAAC GGATGGGGTTAAGTCGCCGTACGAACTGTGGTTTGGAACAATTCCTACTG CCGATCATTTGCGACCGTTTGGAGCTATGGGATACGCGCGACGGAGCGTA CGCAAACACAAGATGGCGCCGAAAGGAGAGAAATGCGCATTCATGGGAAT TCCACGCAACTTCCCCACTGGCACCGTTAGCGTGCTACTCGTAAGGATAA GGCAGATCGTGGAGCGGCAGGCCGTGCAGTGGATCGACGGGCCTAAAAAG ACCGGGGGCGACGACACCGGCAGTGACGACCGCGGTGTGAAGCCGGCGGG AGGTGAACCAATTTTGGGGAGGGGGACTGCGCAGCTAAATGTCCAGGAGC TGGGACAGAAACAGCAGTTGGAGACGCAGGAGGCGTTTTCAGAGCACGAA AGGGGGACGCAGGAAGCGTCTTCAGAGTATAAAGGGGGGACGCAGGAGAC GTTCTAGGAAATGGAGGAGGAGACGCAGGAGGCGTTTTTGAAACACGAGC AGGAGCAACAACAAAAGGAAGGTGAAGCGGGATCTGTATCGGGGTCGGCG GATTTGGAGGGACCGGCCTTACCCGCGCTGCGCAAGCTCACCATAGACGG CAATGTCCCGCCCATGCTACCATCGCGCACGAGGAGTCGAAGACCTCATA CCAATGTGGAGGAAGCAGTGATGCATTGTTTCTTGCCGACGATCGAAGAA GCCGACGTGGAGGATGCGTTGGCGTGTGACGACGGGGGGCAGATGGCCAT GCACGCGACGCTGGATATACAGGAACCGAAGAATCGGCGACAGGCGATGG AATCGCCGGAATGGGACGATTGGCGGAAAGCAGAGGAAATAGAGATTCGT GGCATGGTCGATAACTGCGTTTATAAACAGGTGACTCGGTCGAAGGATAA GCTTGTGGTTGGCACGAAAATGCTCTACAAACGAAAAGTTGGACAGGACG GCAAGGTCGTGAAGTACAAGTGCCGGCTTGTAGCACAAGGGTTCTGGCAG ATAGAGGGTGTGCACTATACGGAGAAATACTCACCCACGCCATTGACCGC ATCAATCCGGATGCTTTTGGCCACAGCAGCGGCCAAGGATGGTGAGCTAC GCCATTTCGACGCGGAGCAGGCATTCCTGACAGCAGACATCGATGAGGAA TTGTACATT
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Coding sequence (CDS) from alignment at H-elongata_contig46862:870..3128-

>mRNA_H-elongata_contig46862.11784.1 ID=mRNA_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3786bp|location=Sequence derived from alignment at H-elongata_contig46862:870..3128- (Himanthalia elongata Himel1 dioecious)
ATGTCGCACACCCGGGCCGGAATGTCTGCGTACAAGAAAGCGTCGCCGGG
GATGACCGTTGAGATCTCTGACGGGAACACTCTACCGGTGGACGGGTTCG
GAAGAATTGAGATGGATATGGACCAACCGGGTCACACACCCAAGAGAGTG
AAGATGGACGATGTTGCGTATGTGCCAGGAATTTCGCGGAACCTGCTATC
TACCCTCAAACCAGTGGAGCAATGGGAGAAACCACTAATATATTACAGGG
ACAAAGCCGTTTTGGGGTTCCCGGAAGACGAATCGCTTGCTTTCAACTTC
TGCCCCCGTAAAGGATTATTTTCAGTTACAGGCGTGAGACGGATCCCGAG
GCAGGAGGTGGATCGAGGAGCAAGATTGGCGGAGAACGGATCGATGTCGC
ACACCCGGGCCGGAATGTCTGCGTACAAGAAAGCGTCGCCGGGGATGACC
GTTGAGATCTCTGACGGGAACACTCTACCGGTGGACGGGTTCGGAAGAAT
TGAGATGGATATGGACCAACCGGGTCACACACCCAAGAGAGTGAAGATGG
ACGATGTTGCGTATGTGCCAGGAATTTCGCGGAACCTGCTATCTACCCTC
AAACCAGTGGAGCAATGGGAGAAACCACTAATATATTACAGGGACAAAGC
CGTTTTGGGGTTCCCGGAAGACGAATCGCTTGCTTTCAACTTCTGCCCCC
GTAAAGGATTATTTTCAGTTACAGGCGTGAGACGGATCCCGAGGCAGGAG
GTGGATCGAGGAGCAAGATTGGCGGAGAACGGATCGGTTCATCGCATGCT
AGCGCACCCGAGCGAGGACATAACGAGAAAGACAACCGAGATGATGGGGA
TTGGAACGACGGGTCAGTGGGGGGCATGCAAGACGTGTTTCCAGGCGAAG
GCGAAGCGATATGCCGTGCCAAAGACGACGGACGAGCGGGCTAGCGTTAA
AGGACAGCGGTTCTTTGTCGACGTGGGTGGGCCGATGAAGCACTCGAGTC
TCGGCGGGAACAGCTACGTCGTCATTTTTGTGGATGACTACACCCGTTTC
AAGGTGGTAAAGTTCGTTAAAAGGAAGAGTGATACAACGGCCGCGCTTTT
GTCTTTGATTGCAGATTATATCACCTCGCAGGAGCTGTCGATCAAGTACG
TACGGACCGATAATGGTGGTGAGTTTGAGGGGGAATTTCAGCGCGAACTA
GACCGGCGCAGCATCACGCACGAGCATACCCCGCCAGACACGCCACAGTA
CAACGGGGTGGCCGAACGCGCGCTTGGACTTTTACGAGAAAAGGCGATCG
CCTTAATGAAGGAGTTAGACAACATCATCAACGTGCCGCGAGAGAAGTTG
TGGGCTCAGGCAATGTTTTTCGCGTGTGACGTCACCAACAAGTCAGTCAC
GACGTCAACGGATGGGGTTAAGTCGCCGTACGAACTGTGGTTTGGAACAA
TTCCTACTGCCGATCATTTGCGACCGTTTGGAGCTATGGGATACGCGCGA
CGGAGCGTACGCAAACACAAGATGGCGCCGAAAGGAGAGAAATGCGCATT
CATGGGAATTCCACGCAACTTCCCCACTGGCACCGTTAGCGTGCTACTCG
TTCATCGCATGCTAGCGCACCCGAGCGAGGACATAACGAGAAAGACAACC
GAGATGATGGGGATTGGAACGACGGGTCAGTGGGGGGCATGCAAGACGTG
TTTCCAGGCGAAGGCGAAGCGATATGCCGTGCCAAAGACGACGGACGAGC
GGGCTAGCGTTAAAGGACAGCGGTTCTTTGTCGACGTGGGTGGGCCGATG
AAGCACTCGAGTCTCGGCGGGAACAGCTACGTCGTCATTTTTGTGGATGA
CTACACCCGTTTCAAGGTGGTAAAGTTCGTTAAAAGGAAGAGTGATACAA
CGGCCGCGCTTTTGTCTTTGATTGCAGATTATATCACCTCGCAGGAGCTG
TCGATCAAGTACGTACGGACCGATAATGGTGGTGAGTTTGAGGGGGAATT
TCAGCGCGAACTAGACCGGCGCAGCATCACGCACGAGCATACCCCGCCAG
ACACGCCACAGTACAACGGGGTGGCCGAACGCGCGCTTGGACTTTTACGA
GAAAAGGCGATCGCCTTAATGAAGGAGTTAGACAACATCATCAACGTGCC
GCGAGAGAAGTTGTGGGCTCAGGCAATGTTTTTCGCGTGTGACGTCACCA
ACAAGTCAGTCACGACGTCAACGGATGGGGTTAAGTCGCCGTACGAACTG
TGGTTTGGAACAATTCCTACTGCCGATCATTTGCGACCGTTTGGAGCTAT
GGGATACGCGCGACGGAGCGTACGCAAACACAAGATGGCGCCGAAAGGAG
AGAAATGCGCATTCATGGGAATTCCACGCAACTTCCCCACTGGCACCGTT
AGCGTGCTACTCACGCAGGAGGCGTTTTTGAAACACGAGCAGGAGCAACA
ACAAAAGGAAGGTGAAGCGGGATCTGTATCGGGGTCGGCGGATTTGGAGG
GACCGGCCTTACCCGCGCTGCGCAAGCTCACCATAGACGGCAATGTCCCG
CCCATGCTACCATCGCGCACGAGGAGTCGAAGACCTCATACCAATGTGGA
GGAAGCAGTGATGCATTGTTTCTTGCCGACGATCGAAGAAGCCGACGTGG
AGGATGCGTTGGCGTGTGACGACGGGGGGCAGATGGCCATGCACGCGACG
CTGGATATACAGGAACCGAAGAATCGGCGACAGGCGATGGAATCGCCGGA
ATGGGACGATTGGCGGAAAGCAGAGGAAATAGAGATTCGTGGCATGGTCG
ATAACTGCGTTTATAAACAGGTGACTCGGTCGAAGGATAAGCTTGTGGTT
GGCACGAAAATGCTCTACAAACGAAAAGTTGGACAGGACGGCAAGGTCGT
GAAGTACAAGTGCCGGCTTGTAGCACAAGGGTTCTGGCAGATAGAGGGTG
TGCACTATACGGAGAAATACTCACCCACGCCATTGACCGCATCAATCCGG
ATGCTTTTGGCCACAGCAGCGGCCAAGGATGGTGAGCTACGCCATTTCGA
CGCGGAGCAGGCATTCCTGACAGCAGACATCGATGAGGAATTGTACATTA
CGCAGGAGGCGTTTTTGAAACACGAGCAGGAGCAACAACAAAAGGAAGGT
GAAGCGGGATCTGTATCGGGGTCGGCGGATTTGGAGGGACCGGCCTTACC
CGCGCTGCGCAAGCTCACCATAGACGGCAATGTCCCGCCCATGCTACCAT
CGCGCACGAGGAGTCGAAGACCTCATACCAATGTGGAGGAAGCAGTGATG
CATTGTTTCTTGCCGACGATCGAAGAAGCCGACGTGGAGGATGCGTTGGC
GTGTGACGACGGGGGGCAGATGGCCATGCACGCGACGCTGGATATACAGG
AACCGAAGAATCGGCGACAGGCGATGGAATCGCCGGAATGGGACGATTGG
CGGAAAGCAGAGGAAATAGAGATTCGTGGCATGGTCGATAACTGCGTTTA
TAAACAGGTGACTCGGTCGAAGGATAAGCTTGTGGTTGGCACGAAAATGC
TCTACAAACGAAAAGTTGGACAGGACGGCAAGGTCGTGAAGTACAAGTGC
CGGCTTGTAGCACAAGGGTTCTGGCAGATAGAGGGTGTGCACTATACGGA
GAAATACTCACCCACGCCATTGACCGCATCAATCCGGATGCTTTTGGCCA
CAGCAGCGGCCAAGGATGGTGAGCTACGCCATTTCGACGCGGAGCAGGCA
TTCCTGACAGCAGACATCGATGAGGAATTGTACATT
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