mRNA_H-elongata_contig46862.11784.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A6A3K5Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K5Y5_9STRA) HSP 1 Score: 215 bits (548), Expect = 8.680e-56 Identity = 198/710 (27.89%), Postives = 305/710 (42.96%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEM-DMDQPGHTPKRVKMDDVAYVPGISRNLLSTLK------PVEQWEKPLIYYRDKAVLGFPEDESLAFNF-CPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMM-GIGTTGQW--GACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEAFLKHE------QEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEAD--------------------VEDALACD--------DGGQMAMHATLD-------------------IQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSGAT HM+ R+ + Y+ + M V I+DG L V G G + + +DQ R+KM DV ++PG+ R LLS K VE + + D + + + A+ C ++ V + E+ H + HP++D KT GI GQ C C + K PK + + S + DV GPMK +S GG Y++ FVDD++R+ VV F+K+KS+ + L + Y + +R+DNG EF + R I H+ T P +PQ NGVAER + EKA +++ + +VP E WA+A+ A + N+S T V +PYEL F PT +HLR FG+ GYA ++ K+ PK +C F+G N F V +T+ L + + G VS A P RK ++ + + P E +C PT+ E D +ED + DG A +D + P QAM + + WR+A + E+ N + V R +G + ++ +K Q G+VV+YK RLV +GF Q G+ + E YSP SIR++L+ AA + + D++ AFL + + + +Y+
Sbjct: 164 DSGATAHMTPHRSDLLEYEALNTTMEVTIADGKKLTVAGRGTVRLLGLDQ-----NRIKMVDVLHIPGLDRRLLSVGKLAERDLNVEPQRFSCVIWGDVSAIALGKKVGKAYVLDCDQEEARFVEYAGADSQWEL-----------WHARMGHPNKDALAKTQRATNGIPDVGQAFPTLCGGCMKGKQTVEVFPKRSKTKTSRVLELVHTDVMGPMKSTSKGGAKYILTFVDDFSRYVVVYFLKKKSEVASKLKEFMRFYEKQWGERLMCLRSDNGTEFVTKDVARICTLNGIMHQRTVPYSPQQNGVAERVNRTIMEKARSML----HYKSVPTE-WWAEAVSTAVYLINRSTNTQHTSV-TPYELGFKVKPTLEHLRVFGSHGYAHIDKAKRTKLEPKSFRCMFLGYADNVKGYRVFDLDASKVKVTRSVKLDERAVDGIYETLPARNGTVIRVSEDAHDAVTPAPVERKPAVEEPMEGVENDAPDRNDPPPTGLELAPYCAPPTVFEDDRVVFHPPVHRSRRAREPVFLLEDGTDAEEERKSEGSDGPPSPKRARIDEDGLLAEAVLAYAASIGDAVDIPTTHAQAMANDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVTKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDSDTAFLNSGLKDRVYM 851
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 215 bits (548), Expect = 1.040e-55 Identity = 193/682 (28.30%), Postives = 295/682 (43.26%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLST-----LKPVEQWEKPLIYY-RDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPRQEV--DRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGA-CKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLL---TQEAFL---------------KHEQ-------------EQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEAD--VEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSGAT HM+ + + Y + V + D T+ G G + D + + + +V Y+P + +NLLS L + Q++ R+ +L E + G+ + R P + + R L NG S+ I E M G+ + C++C K R PK T RAS + DV GPM S G + Y V F+DDY+++ V F+K K + ++ Y+ + +K +R+DNGGE+ + F+ L I H+ T P P+ NG AER L E A ++M +P+E WA+A+ A N+S T S + +P+E F P +L+ FG + Y ++ K+ K KC F+G +P GT L T++ F+ K+EQ E Q G V AD E + + ++ NVP + R N V + P A E+ C D T DI EP+N +A + W+KA + E +++N ++ V DK +VG++ ++K K DG V K+K RLVAQG+ Q EG+ Y E +SP SIR LLA A D E+ D AFL D+ +E+Y+
Sbjct: 304 DSGATQHMTSEKNRLVNYVEFKQPCKVNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLSVQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGI--------SKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYM 960
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT) HSP 1 Score: 203 bits (517), Expect = 6.300e-52 Identity = 185/665 (27.82%), Postives = 303/665 (45.56%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDM---DQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTG---VRRIPRQEVDRGARLAENGSV--HRMLAHPS-EDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA---LPALRKLT-IDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALAC------------DDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSGAT HM+ R +S Y + +V + D ++ G G + D+ H V + +V Y+P + +NLLS V+ RD A + F E++ + + G V I ++ V+ + + H L H ++ + E M G + C + K R PKT D RAS + DV GPM SLGG+ Y V F+DDY+R+ V F+K KS+ + IK + +DNGGE+ EF+ L + I H+ + P P NGVAER + + + + + ++P E WA+A+ + V N+S T + + + +PYE F P +LR FG + Y ++ K+ K K FMG P + ++++ + +K+ + S++ + A +P + + T +DGN + R ++A T EE + + D+ +A T DI EP N +A +W++A + E +++N ++ V+ K K VVG+K ++K K ++G V +YK RLVAQG+ Q EGV Y+E +SP +IR LLA + AK+ E+ D + AFL +++EE+Y+
Sbjct: 301 DSGATQHMTFERNRLSNYVEFKRPCSVNLGDNRSILAYGKGTYHVKAVVNDRIQH----VALQEVLYLPELDKNLLSVHAMVK---------RD-ATVTFKENKCEISRNLKILAVGEIQGKLYVLNIVKEHVNIAKQQPDTDRYLWHCRLGHLGMNNVNKLINENMVSG--------EACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYM 937
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: B1PJ47_PHATR (Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B1PJ47_PHATR) HSP 1 Score: 202 bits (515), Expect = 2.080e-51 Identity = 199/727 (27.37%), Postives = 325/727 (44.70%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGM-TVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPR--KGLFSVTGVRRIPRQ----EVDRG-------------ARLAENGSV----------------HRMLAHPSEDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTA-DHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTV--------SVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA------------LPALRKLTI---------------DGNVPPMLPS-RTRSRRPHTNVEEAVMHCFL---PTIEEADVEDALACDDGGQMAMHATLDIQ------EPKNR-RQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSK----DKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLA-TAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSGA+ H GM Y SP + V + +G ++ G I Q T ++ ++ +VP +++NLLS + ++ P + ++ L ++ CPR G++ + R P+ E +RG A + + G+ H L H E + +KT + I TG+ +C+ C AKAK+ +V KTT+ RA G+R FVD+ GP + LG Y + VDD TR + FVK++SD + L + + + KY+R DN GE + ++ D++ +T E T PDTPQ NGV ER + +L+++A A+M D + R LWA+A+ A D+ N S+ T +D KSP +L+ + D L FG +GYA R K K K + +G +N T S++ +++ + K + V L+ P +P + ++ I D VP + S R+ + + +E + + PT +EA + + + +H + + EPK +A+ PE + W + EI + +K+V RS+ K ++ TK ++K+K QDG +YK R+V +GF QI GV Y+E +SP S+R+ +A T A D + D E AFL +D + YI
Sbjct: 404 DSGASGHTFKNAQGM--YNIKSPIIKNVIVGNGVNCKIEKSGSISF---QDSETKTIIEATEIHHVPNMTKNLLSLSRLIDDGWNPQ-FTKEALFLERVQNGQQKRIKCPRYSDGMYYLEAKRVNPQDVNIAETERGGQKVSETTWRDVTAEIDDKGNTKGQKHVKIKSMDINEAHDKLGHKGEVLLKKTLKHHSIKVTGELQSCEGCCLAKAKQKSVSKTTNIRAKSPGERLFVDMSGPFTATILGSR-YQIQVVDDATRKGFIGFVKKRSDLSQWLEENVLSKLEGMQKQTKYLRADNAGENKNPLEKLCDKKGMTLELTAPDTPQQNGVVERRIAVLQQRANAMMMAAD-LTPEARALLWAEALNTANDLENISLNTMSD--KSPDKLFSNELTKLMDRLVEFGRIGYATIRRKFKGKWKEKSLRVIMVGYAKNHSADTYRLYNPQNKSIIESRDVVWSDWKRPDPKRTLSIFVKDPDTLKEPVGIDDKEFVSEVKMPEIPQVNIPEDAAPDTAAGRNVGDAAVPVVQESDEERAAKIASRLEREMRKLDVSWNPTAKEAMEKPTVVEQNNRSKQVHFVFNTELSSDHGEPKELLSEALVGPEKEKWLPSAVNEIMNFISRGSWKKVPRSQARKSGKTILPTKWVFKKKDEQDG-TTRYKSRIVTKGFMQIPGVDYSESFSPVANDTSVRIGIAKTLANNDWVIEVIDIEAAFLEGQLDRDTYI 1119
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT) HSP 1 Score: 198 bits (504), Expect = 3.340e-50 Identity = 153/502 (30.48%), Postives = 245/502 (48.80%), Query Frame = 1
Query: 469 MMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSL--IADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA---LPALRKLT-IDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALAC------------DDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
M G+ T + C+ C + K R PKT D RAS + + DV GPM SLGG+ Y V F+DDY+R+ V F+K KS+ A IT + IK +R+DNGGE+ EF+ L + I H+ + P P NGVAER + + + + + ++P E WA+A+ + V N+S T + + + +PYE F P +LR FG + Y ++ K+ K K FMG P + ++++ + +K+ + S++ + A +P + + T +DGN + R ++A T EE + + D+ +A T DI EP N +A +W++A + E +++N ++ V+ K K VVG+K ++K K ++G V +YK RLVAQG+ Q EGV Y+E +SP +IR LLA + AK+ E+ D + AFL ++ EE+Y+
Sbjct: 357 MDGVSNTNENQFCEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKP--IKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYM 849
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A445JBB1_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445JBB1_GLYSO) HSP 1 Score: 199 bits (505), Expect = 3.940e-50 Identity = 173/628 (27.55%), Postives = 285/628 (45.38%), Query Frame = 1
Query: 79 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPR----QEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTTG---QWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVR-KHKMAPKGEKCAFMGIPRNF------PTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
V +D T+ V+G G++ M + G + V YVPG+ NLLS + +E+ + ++ DKA+ + + +L KG+ S + +I Q+ A E H H + D+ R ++ + G C C ++K R A R+ K Q F DV GP++H + GN Y V F+DD+TR + +KRK++ +I+ +RTD GGE+ EF + ITHE TPP TPQ+NGVAER L +++K N+P+ W +A+ A + N+S T + + +P E W G P H R FG++ Y + + K+ KGE +G P V+ F + + ++GE+ + + PA + I+G P+ + P + + ++ A DD G + A L EP ++AM++ +W +A + E+R + N ++ V K K +G K +YK KV G+VVKYK RLVA+GF Q GV Y E ++P ++R+++A A+ + ++ D + AFL +++EE+Y+
Sbjct: 386 VRFADDRTMKVEGVGKV-MIRKKDGSL---CYITGVLYVPGMKSNLLSIGQLLEKGYRMVL--EDKAMKVYDTEHNLLM-----KGILSNNRIFKIELGMLLQQCLATAVDKEEWLWHFRYGHLNFGDLNRMQSKAIVKGLPHIHVPKDVCAECMESKMSRGAFNPNVPSRSKRKLQVIFSDVCGPIQHETPAGNKYFVTFIDDFTRKLWIYLIKRKNEVLGVFKKFKVLVEKQSGQNIEILRTDGGGEYVSTEFDEYCENEGITHEVTPPYTPQHNGVAERKNRTLLNMVRSMLKSK----NMPK-MWWGEAVNTAAYIINRSPTKKMENI-TPEEAWTGVKPNVSHFRVFGSVCYRHVPDQLRTKLDDKGEVMIMVGYHSTGGYKLVNPVNNKIVISRDIVFDEGNAWKWSEKGESSTGVEQNLFDVPA--GETESDIEGETGPVEDNDDEGGSPEMPRRSLRQRQVPARLNDYEIMPDGAIDDEGDLVHFALLAETEPVTLQEAMKNSKW---LEAMKEELRSIEKNLTWELVELPKGKKAIGVKWVYKVKVNPKGEVVKYKARLVARGFLQRHGVDYEEVFAPVARIETVRVVVAHASMQRWKVHQLDVKSAFLNGELEEEVYV 991
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 198 bits (504), Expect = 4.950e-50 Identity = 175/662 (26.44%), Postives = 290/662 (43.81%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRK-GLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGA-CKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGS---------ADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTN-----VEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSGAT HM+ ++ +S Y + V + D ++ G G + D H + + + DV Y+P + +NLLS V+ + + + + LA K + + V + D +L H + + ++ + + + M G+ + C+ C K R P +RA+ + DV GPM +S+GG+ Y V F+DDYTR+ V F+K K + A + S+K +RTDNGGE+ EF+ L + I H+ T P P NGV+ER L E ++M + + WA+A+ A + N+S TTS + +PYE F P +LR FG +A ++ K K K F+G P + T + +++ + K+G +G +E +PA+ I+G+ ++ H EE M ++ DD +A + T DI EP + ++A +W++A + E ++ N ++ V K K +VG++ ++K K DG V ++K RLVAQG+ Q +G+ Y E +SP SIR LLA A D E+ D + AFL ++DE +++
Sbjct: 292 DSGATQHMTFDKSNLSDYVEFKQPCIVNLGDNRSILAYGKGTYRIVADLGDHV-QNISLRDVLYLPDLEKNLLSVRAMVKLGAN--VRFEGEGCEITRNSKLLAVGKMQGKLYMLKIVTVDHANIAKEDLNLKLWHYRYGHLGMDNVNKLMKGEMVQGMDCVMDGESDSVCEGCIMGKQHRTKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTPV-----EFWAEAINTAVYLRNRSPTTSLKEI-TPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIGYPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAV---VIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSRFDDKCYVADNLTADINEPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFM 941
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A8J6HA52_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HA52_TENMO) HSP 1 Score: 197 bits (500), Expect = 1.630e-49 Identity = 182/705 (25.82%), Postives = 304/705 (43.12%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPED--ESLAFNFCPRKG-----LFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTT----GQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKH-KMAPKGEKCAFMGIP------RNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPS-------RTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHA----------------------------------------TLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSGAT HMS+ + +K V +++G + V G GR E+ +V +++V YVP ++ NLLS + + +GF + E N KG ++ +T R + ++ ++ S HR H ED+ + + M G G C+ C + K R +PK RA+ + D+ GPM++++ G Y + +DDY+RF V F+K KS+ + + I E +K +R+DNG E+ E QR L I ++T P + NGVAER L E A ++ + + ++K WA+A+ AC + N + + D K+P+ELW P HL FG GYA K K+ K F+G R T T + ++++ + ++++E E GS + E + R D N P S N ++ ++ ++ E + +LA D + ++ A D +EPKNR +A+ + DW +A E++ + +N + T + + +G K ++KRK + ++KYK RLVAQGF Q G Y E ++P ++R+LLA A + ++ HFDA+ AFL ++ E +Y+
Sbjct: 274 DSGATSHMSNDESFFKTLEKRKM-RDVTVANGESAKVLGIGRGELHCLNGKDEAVKVCLENVLYVPDLTENLLSVKRLAKTGHS----------VGFTGEQCEISKNNIVIAKGKLSPDMYELTVPHRSLAVKQNQHTPNCQH-SWHRRFGHRHPEDVQKLEIKKMATGLKIQDCGIREVCECCIKGKMSRCPIPKKATTRATSVLELVHTDLCGPMQNATPSGKRYFMTMIDDYSRFTQVYFLKFKSEVSKFINEYIKYAENKFEKKVKVIRSDNGREYITKELQRSLTEMGIKVQYTAPYSAFQNGVAERKNRTLMEAARCMLIDAEI-----KKKYWAEAVNTACYLQNILPSKAVD--KTPFELWNRRKPDVKHLHIFGCKGYAHLPKEKRRKLDEKAISLTFVGYSAESKAYRMLDTATDKITISRDVKIIERDLKREEENEKGSSQENKSTERRKIVENR----DENTPESGQEVNYSEDIEIISENELENEQDQGLNESSESLNEFEETQSLAMDSVLEQSLPAGDEEYVFQGNLDDLNNQEVRVSERPTKGQPPDRFKPQANIVRDHEEPKNRTEALSGVDKHDWIRAMNEEMKALTENSTWVLTTLPEGRKTIGCKWVFKRKKNANTGLIKYKARLVAQGFSQKYGTDYDEVFAPVVRATTLRLLLAIATQRKLKIHHFDAKTAFLNGELKETIYM 955
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A2N9ETQ8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ETQ8_FAGSY) HSP 1 Score: 192 bits (488), Expect = 6.480e-48 Identity = 183/653 (28.02%), Postives = 282/653 (43.19%), Query Frame = 1
Query: 1 DSGATFHMSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQ--W----EKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKH---KMAPKGEKCAFMGIPRNFP-----TGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
DSG + HM+ + + K V +D LP+ G + P K+V ++ V +VPG+ +NLLS + + W K + Y++ V+G P E S + + VD + S H++ ++ + + ++ T C C KA + ++ RA + DV G +K SS+ G Y+V F+DD++R+ V F+K KS+T + + IK +RTDNGGE+ EF L + +I + T P TPQ NGVAER L E + + + + NVP + WA+ M A + N+ D V SP++ + T P H R FG + Y V H K K +C F+G T T + E E +A LPAL++ I+ +P + + + T V P +EE E+ DD I+EP +A +S +DWRKA E EI + N + V + KD + K +YK K DG + +YK RLVA+GF Q G+ Y E +SP ++R+LLA AA+K +L D + AFL ++D E+Y+
Sbjct: 722 DSGCSNHMTGDKEKLQNMSKYKGKRVVVTADNTRLPIAHIGETLI---SPRFNAKQVPLEQVYHVPGVKKNLLSVAQLADSGNWVLFGPKDVKVYKEIVVIGTPTMEGQRMESVYVMSAESAYVDKTRKNETVDLWHARLGHVSYHKLKVMMNKSLVKGLPQLECREDT----VCAGCQYGKAHQLPYQESKF-RAKEPLELVHSDVFGRVKQSSIKGMRYMVTFIDDFSRYVWVFFMKEKSETLSKFIEFRMKVENEVGKKIKCLRTDNGGEYTSDEFCDYLRKCNIRRQLTCPGTPQQNGVAERKNRHLAE----ICRSMLHAKNVPG-RFWAECMKTAAHIINRLPQARLDFV-SPFQKMWNTKPKVSHFRVFGCVCYV--FVPDHLRSKFDKKAIRCIFVGYDSQRKGWRCCDPTTGRCYTSRNVIFDEASSWWSEDKA------------TLPALKE--IEKKMPESMEEQLGKDQSKTGVHHRTPEEDRPRLEEVIEEEEK--DDN----------IKEPSTYEEASQS---EDWRKAMEEEIHALKQNQTWDLVPKPKDVKPISCKWVYKVKTRADGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKSWKLWQMDVKNAFLHGELDREIYM 1329
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 191 bits (485), Expect = 1.460e-47 Identity = 163/569 (28.65%), Postives = 258/569 (45.34%), Query Frame = 1
Query: 418 HRMLAHPSEDITRKTTE---MMGIGTTGQWG---ACKTCFQAKAKRYAVPKTTD-ERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKHKMAPKGEKCAFMG-------------------IPRNF-------------PTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALP---ALRKLTIDGNVPPMLPSRTRSRRPHT----------------------NVEEAVMHCFLPTIEEADVEDALACDDGGQ--MAMHATLDI---QEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 1914
HR + H S I + + G+ T + C +C QAK R VPK + +R G R DV GP + +LGG Y F DD TR+ + ++ KS T +A S A +IK +++D GGE+ EF L T DTPQ+NG+AER L E A A++ + +P+ LW +AM A + N++ T + DG K+P+E+ +G +P L FGA + R K+ K + F+G + RN P G + ++ H+ +Q+ K S + P++P A + D N P P+ RS RP + + L + E++ + +G + AM A + QEP++ +AM+SP+W W+KA E E+R + D+ Y V ++ VVG+K +++ K +GK+ YK RLVAQGF QI G+ + + ++P ASIR++LA AA D ++ D + A+L AD++EE+++
Sbjct: 529 HRRMGHISPIIAERLVREGRVEGVRLTDKANKEKTCNSCIQAKITRATVPKERESDRTKELGDRVRSDVWGPAQTETLGGKKYFTSFTDDATRWTDLYLLRAKSGTFSAYKSYEAKLKNQDGKTIKALQSDRGGEYLSREFTDHLTTHGTVSRLTVHDTPQHNGLAERINRTLPEHARAMLIAAE----LPKN-LWGEAMMHATWLKNRTSTRALDG-KTPFEVRYGHLPDLGDLHEFGAKVWVRIE-NAGKLDSKAREGRFVGYSTESKGYRVYWPDKRAVSVERNVRFIDETVIADEAQPEGVIEAVVPSSPSTLHQPQQKPKSHTEPPAPSSVNP--PSMPTSDAPAQEHKDENHAPEAPAE-RSHRPRKASAYVKRLNDGSGVADGRKSRPKYPQGLQPGDLMGAAAVEAEESESEQEGDEPIFAMPAAFAVREGQEPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFM 1087 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46862.11784.1 >prot_H-elongata_contig46862.11784.1 ID=prot_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=631bp MSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVback to top mRNA from alignment at H-elongata_contig46862:870..3128- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46862.11784.1 ID=mRNA_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2259bp|location=Sequence derived from alignment at H-elongata_contig46862:870..3128- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46862:870..3128- >mRNA_H-elongata_contig46862.11784.1 ID=mRNA_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3786bp|location=Sequence derived from alignment at H-elongata_contig46862:870..3128- (Himanthalia elongata Himel1 dioecious)back to top |