prot_H-elongata_contig46862.11784.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig46862.11784.1
Unique Nameprot_H-elongata_contig46862.11784.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length631
Homology
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 206 bits (523), Expect = 1.560e-52
Identity = 185/656 (28.20%), Postives = 283/656 (43.14%), Query Frame = 0
Query:   20 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLST-----LKPVEQWEKPLIYY-RDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPRQEV--DRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGA-CKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEGE-FQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLL---TQEAFL---------------KHEQ-------------EQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEAD--VEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            V + D  T+   G G   +  D      + + + +V Y+P + +NLLS      L  + Q++       R+  +L   E     +      G+  +   R  P + +   R   L  NG         S+ I     E M     G+  + C++C   K  R   PK T  RAS   +    DV GPM   S G + Y V F+DDY+++  V F+K K +        ++ Y+ +    +K +R+DNGGE+  + F+  L    I H+ T P  P+ NG AER    L E A ++M        +P+E  WA+A+  A    N+S T S +   +P+E  F   P   +L+ FG + Y      ++ K+  K  KC F+G    +P GT    L   T++ F+               K+EQ             E  Q     G V   AD E   +    +  ++ NVP    +     R   N    V +   P    A    E+   C D        T DI EP+N  +A  +     W+KA + E   +++N  ++ V    DK +VG++ ++K K   DG V K+K RLVAQG+ Q EG+ Y E +SP     SIR LLA A   D E+   D   AFL  D+ +E+Y+
Sbjct:  330 VNLGDDRTIFAFGKGTYNLVADLGNGRTQNIALKEVLYLPDLKKNLLSVQVMGKLGALIQFDGVQCKIERNSKLLATGELHGKLYMLKIIPGVEYINVAREAPDKNLWHCRFGHLGMNGI--------SKLINENMAEGMNCSDHGKESSLCESCVMGKQHRTPFPKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVS-YVNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA----GMPKE-FWAEAVNTATYTRNRSPTNSLNNA-TPFECLFNRKPDVSNLKVFGCVAYVHIPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVNPPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADD------LTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYM 960          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A6A3K5Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K5Y5_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.490e-52
Identity = 192/703 (27.31%), Postives = 299/703 (42.53%), Query Frame = 0
Query:    1 MSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEM-DMDQPGHTPKRVKMDDVAYVPGISRNLLSTLK------PVEQWEKPLIYYRDKAVLGFPEDESLAFNF-CPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMM-GIGTTGQW--GACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRN------FPTGTVSVLLTQEAFLKHE------QEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEAD--------------------VEDALACD--------DGGQMAMHATLD-------------------IQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            M+  R+ +  Y+  +  M V I+DG  L V G G + +  +DQ      R+KM DV ++PG+ R LLS  K       VE      + + D + +   +    A+   C ++    V       + E+            H  + HP++D   KT     GI   GQ     C  C + K      PK +  + S   +    DV GPMK +S GG  Y++ FVDD++R+ VV F+K+KS+  + L   +  Y       +  +R+DNG EF   +  R      I H+ T P +PQ NGVAER    + EKA +++    +  +VP E  WA+A+  A  + N+S  T    V +PYEL F   PT +HLR FG+ GYA     ++ K+ PK  +C F+G   N      F      V +T+   L         +    + G    VS  A       P  RK  ++  +  +         P     E   +C  PT+ E D                    +ED    +        DG      A +D                   +  P    QAM + +   WR+A + E+     N  +  V R      +G + ++ +K  Q G+VV+YK RLV +GF Q  G+ + E YSP     SIR++L+  AA +  +   D++ AFL + + + +Y+
Sbjct:  171 MTPHRSDLLEYEALNTTMEVTIADGKKLTVAGRGTVRLLGLDQ-----NRIKMVDVLHIPGLDRRLLSVGKLAERDLNVEPQRFSCVIWGDVSAIALGKKVGKAYVLDCDQEEARFVEYAGADSQWEL-----------WHARMGHPNKDALAKTQRATNGIPDVGQAFPTLCGGCMKGKQTVEVFPKRSKTKTSRVLELVHTDVMGPMKSTSKGGAKYILTFVDDFSRYVVVYFLKKKSEVASKLKEFMRFYEKQWGERLMCLRSDNGTEFVTKDVARICTLNGIMHQRTVPYSPQQNGVAERVNRTIMEKARSML----HYKSVPTE-WWAEAVSTAVYLINRSTNTQHTSV-TPYELGFKVKPTLEHLRVFGSHGYAHIDKAKRTKLEPKSFRCMFLGYADNVKGYRVFDLDASKVKVTRSVKLDERAVDGIYETLPARNGTVIRVSEDAHDAVTPAPVERKPAVEEPMEGVENDAPDRNDPPPTGLELAPYCAPPTVFEDDRVVFHPPVHRSRRAREPVFLLEDGTDAEEERKSEGSDGPPSPKRARIDEDGLLAEAVLAYAASIGDAVDIPTTHAQAMANDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVTKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDSDTAFLNSGLKDRVYM 851          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 198 bits (504), Expect = 2.950e-50
Identity = 153/502 (30.48%), Postives = 245/502 (48.80%), Query Frame = 0
Query:  150 MMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSL--IADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA---LPALRKLT-IDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALAC------------DDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            M G+  T +   C+ C + K  R   PKT D RAS   +  + DV GPM   SLGG+ Y V F+DDY+R+  V F+K KS+           A  IT +   IK +R+DNGGE+   EF+  L +  I H+ + P  P  NGVAER    +    +   + + +  ++P E  WA+A+  +  V N+S T + + + +PYE  F   P   +LR FG + Y      ++ K+  K  K  FMG P       +   ++++     +    +K+     +  S++ +  A   +P + + T +DGN      +  R        ++A       T EE  + +                D+   +A   T DI EP N  +A       +W++A + E   +++N  ++ V+  K K VVG+K ++K K  ++G V +YK RLVAQG+ Q EGV Y+E +SP     +IR LLA + AK+ E+   D + AFL  ++ EE+Y+
Sbjct:  357 MDGVSNTNENQFCEACIKGKYHRCPYPKTADYRASEPFEHVYSDVCGPMSVPSLGGSRYYVSFIDDYSRYTFVYFMKNKSEVLEKFKEFHTFATNITGKP--IKVLRSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGERRMRRPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSEYNSLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYM 849          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A445JBB1_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445JBB1_GLYSO)

HSP 1 Score: 199 bits (505), Expect = 3.470e-50
Identity = 173/628 (27.55%), Postives = 285/628 (45.38%), Query Frame = 0
Query:   20 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTGVRRIPR----QEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTTG---QWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVR-KHKMAPKGEKCAFMGIPRNF------PTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            V  +D  T+ V+G G++ M   + G       +  V YVPG+  NLLS  + +E+  + ++   DKA+  +  + +L       KG+ S   + +I      Q+    A   E    H    H +  D+ R  ++ +  G          C  C ++K  R A       R+  K Q  F DV GP++H +  GN Y V F+DD+TR   +  +KRK++                  +I+ +RTD GGE+   EF    +   ITHE TPP TPQ+NGVAER    L     +++K      N+P+   W +A+  A  + N+S T   + + +P E W G  P   H R FG++ Y     + + K+  KGE    +G           P     V+     F +    +  ++GE+ +       + PA     +  I+G   P+  +      P               + + ++    A DD G +   A L   EP   ++AM++ +W    +A + E+R +  N  ++ V   K K  +G K +YK KV   G+VVKYK RLVA+GF Q  GV Y E ++P     ++R+++A A+ +  ++   D + AFL  +++EE+Y+
Sbjct:  386 VRFADDRTMKVEGVGKV-MIRKKDGSL---CYITGVLYVPGMKSNLLSIGQLLEKGYRMVL--EDKAMKVYDTEHNLLM-----KGILSNNRIFKIELGMLLQQCLATAVDKEEWLWHFRYGHLNFGDLNRMQSKAIVKGLPHIHVPKDVCAECMESKMSRGAFNPNVPSRSKRKLQVIFSDVCGPIQHETPAGNKYFVTFIDDFTRKLWIYLIKRKNEVLGVFKKFKVLVEKQSGQNIEILRTDGGGEYVSTEFDEYCENEGITHEVTPPYTPQHNGVAERKNRTLLNMVRSMLKSK----NMPK-MWWGEAVNTAAYIINRSPTKKMENI-TPEEAWTGVKPNVSHFRVFGSVCYRHVPDQLRTKLDDKGEVMIMVGYHSTGGYKLVNPVNNKIVISRDIVFDEGNAWKWSEKGESSTGVEQNLFDVPA--GETESDIEGETGPVEDNDDEGGSPEMPRRSLRQRQVPARLNDYEIMPDGAIDDEGDLVHFALLAETEPVTLQEAMKNSKW---LEAMKEELRSIEKNLTWELVELPKGKKAIGVKWVYKVKVNPKGEVVKYKARLVARGFLQRHGVDYEEVFAPVARIETVRVVVAHASMQRWKVHQLDVKSAFLNGELEEEVYV 991          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: B1PJ47_PHATR (Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B1PJ47_PHATR)

HSP 1 Score: 197 bits (501), Expect = 1.160e-49
Identity = 189/700 (27.00%), Postives = 313/700 (44.71%), Query Frame = 0
Query:   20 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPR--KGLFSVTGVRRIPRQ----EVDRG-------------ARLAENGSV----------------HRMLAHPSEDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTA-DHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTV--------SVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA------------LPALRKLTI---------------DGNVPPMLPS-RTRSRRPHTNVEEAVMHCFL---PTIEEADVEDALACDDGGQMAMHATLDIQ------EPKNR-RQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSK----DKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLA-TAAAKDGELRHFDAEQAFLTADIDEELYI 631
            V + +G    ++  G I     Q   T   ++  ++ +VP +++NLLS  + ++    P  + ++   L   ++       CPR   G++ +   R  P+     E +RG             A + + G+                 H  L H  E + +KT +   I  TG+  +C+ C  AKAK+ +V KTT+ RA   G+R FVD+ GP   + LG   Y +  VDD TR   + FVK++SD +  L   +   +   +   KY+R DN GE +   ++  D++ +T E T PDTPQ NGV ER + +L+++A A+M   D +    R  LWA+A+  A D+ N S+ T +D  KSP +L+   +    D L  FG +GYA  R   K K   K  +   +G  +N    T         S++ +++      +    K   +  V     L+ P             +P + ++ I               D  VP +  S   R+ +  + +E  +    +   PT +EA  +  +   +     +H   + +      EPK    +A+  PE + W  +   EI   +    +K+V RS+     K ++ TK ++K+K  QDG   +YK R+V +GF QI GV Y+E +SP     S+R+ +A T A  D  +   D E AFL   +D + YI
Sbjct:  429 VIVGNGVNCKIEKSGSISF---QDSETKTIIEATEIHHVPNMTKNLLSLSRLIDDGWNPQ-FTKEALFLERVQNGQQKRIKCPRYSDGMYYLEAKRVNPQDVNIAETERGGQKVSETTWRDVTAEIDDKGNTKGQKHVKIKSMDINEAHDKLGHKGEVLLKKTLKHHSIKVTGELQSCEGCCLAKAKQKSVSKTTNIRAKSPGERLFVDMSGPFTATILGSR-YQIQVVDDATRKGFIGFVKKRSDLSQWLEENVLSKLEGMQKQTKYLRADNAGENKNPLEKLCDKKGMTLELTAPDTPQQNGVVERRIAVLQQRANAMMMAAD-LTPEARALLWAEALNTANDLENISLNTMSD--KSPDKLFSNELTKLMDRLVEFGRIGYATIRRKFKGKWKEKSLRVIMVGYAKNHSADTYRLYNPQNKSIIESRDVVWSDWKRPDPKRTLSIFVKDPDTLKEPVGIDDKEFVSEVKMPEIPQVNIPEDAAPDTAAGRNVGDAAVPVVQESDEERAAKIASRLEREMRKLDVSWNPTAKEAMEKPTVVEQNNRSKQVHFVFNTELSSDHGEPKELLSEALVGPEKEKWLPSAVNEIMNFISRGSWKKVPRSQARKSGKTILPTKWVFKKKDEQDG-TTRYKSRIVTKGFMQIPGVDYSESFSPVANDTSVRIGIAKTLANNDWVIEVIDIEAAFLEGQLDRDTYI 1119          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 192 bits (489), Expect = 2.560e-48
Identity = 179/658 (27.20%), Postives = 297/658 (45.14%), Query Frame = 0
Query:    1 MSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDM---DQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNFCPRKGLFSVTG---VRRIPRQEVDRGARLAENGSV--HRMLAHPS-EDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYAR-RSVRKHKMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPA---LPALRKLT-IDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALAC------------DDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            M+  R  +S Y +     +V + D  ++   G G   +     D+  H    V + +V Y+P + +NLLS    V+         RD A + F E++           +  + G   V  I ++ V+   +  +      H  L H    ++ +   E M  G        + C + K  R   PKT D RAS   +    DV GPM   SLGG+ Y V F+DDY+R+  V F+K KS+            +      IK + +DNGGE+   EF+  L +  I H+ + P  P  NGVAER    +    +   + + +  ++P E  WA+A+  +  V N+S T + + + +PYE  F   P   +LR FG + Y      ++ K+  K  K  FMG P       +   ++++     +    +K+     +  S++ +  A   +P + + T +DGN      +  R        ++A       T EE  + +                D+   +A   T DI EP N  +A       +W++A + E   +++N  ++ V+  K K VVG+K ++K K  ++G V +YK RLVAQG+ Q EGV Y+E +SP     +IR LLA + AK+ E+   D + AFL  +++EE+Y+
Sbjct:  308 MTFERNRLSNYVEFKRPCSVNLGDNRSILAYGKGTYHVKAVVNDRIQH----VALQEVLYLPELDKNLLSVHAMVK---------RD-ATVTFKENKCEISRNLKILAVGEIQGKLYVLNIVKEHVNIAKQQPDTDRYLWHCRLGHLGMNNVNKLINENMVSG--------EACIKGKHHRCPYPKTADYRASEPFELVHSDVCGPMSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAER----MNRTVVETTRSMLSHAHIPNE-FWAEAVNTSVYVRNRSPTKALNDI-TPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMGYPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYM 937          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A2N9FYK2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FYK2_FAGSY)

HSP 1 Score: 192 bits (488), Expect = 5.110e-48
Identity = 177/675 (26.22%), Postives = 285/675 (42.22%), Query Frame = 0
Query:    1 MSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESL--AFNFCPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEMMGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKH--KMAPKGEKCAFMGIPRNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNV----PPMLPSR----------------TRSRRPHTNVEEAVMHCFL-PTIEEADVEDALACDDGGQ------------------MAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            M H R   SA +   P ++V++ +G+TL + G G   +       +P  +   +V Y+P    NLLS  +        + +     +   P+   L  A + C    ++    +  +  Q        A     HR L HPS     +        T+     C  C ++K  R     + + ++S    R F D+ G     S+ G+ Y +  VDD++R   +  ++ KS+    LL   A        ++K +RTDNG EF E + Q  L    I HE T  +TPQ NGVAER         + + + L    ++P  K W + +  A  + N++ +      KSP+EL F TIPT +HLR FG + YA+ ++R H  K +P+  KC F+G P N     +  L T + F   +    +            D+  P++P L  L +   +     P+LP+                 T  R   T    A +  ++ PT+       +L     G                   + +HA     EP     A+    W   R+A   E+R +  N  +        K  +G K ++K K+  DG + +YK RLVA+G+ Q+EG+ Y E ++P     ++R LLA AAA+   +   D   AFL  D+DEE+Y+
Sbjct:  358 MCHDRRLFSALQPPPPSLSVKLPNGHTLSIMGIGYCIL-------SPTLI-FTNVYYIPDFHFNLLSVSQFTSNTNYIVSFSSKNFLFQDPQSTRLIGAGDLCNGLYVYRPNNILALSVQPT------ANKDLWHRRLGHPSRLFIPQL-----FNTSHVISDCDVCARSKHTRLPFSSSAN-KSSFPFNRIFCDIWGGYHTPSICGSHYFLTIVDDFSRTTWLYLMRYKSEAHTNLLHFFALVQNQFNTTVKKLRTDNGQEFLETKLQSYLQNHGIIHERTCVETPQQNGVAERK----HRHLLNIARSLRFQAHLPL-KFWGECVLTAAYLINRTPSRILQN-KSPFELLFNTIPTYNHLRVFGCLCYAQ-TLRNHRDKFSPRASKCLFLGYPGNHKAYKLYNLDTHKIFFSRDVTFHEN---IFPFQDLPDIPSPSIPIL-PLPVPEPILSLPEPILPTSXXXXXXXXXXXXXXXXTSLRPRRTTSRPAYLQDYVCPTLHVGPTASSLTTSTSGTAHPLSAFLSYSRFSSSHLIFLHALTSSVEPSCYSTALRHSHW---REAMSTELRALEANSTWTLEPLPPGKKPIGCKWVFKTKLRADGSIERYKARLVAKGYTQVEGLDYHETFAPVAKMTTVRCLLAVAAAQQWIIHQLDVNNAFLHGDLDEEVYM 998          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 191 bits (485), Expect = 1.290e-47
Identity = 163/569 (28.65%), Postives = 258/569 (45.34%), Query Frame = 0
Query:  133 HRMLAHPSEDITRKTTE---MMGIGTTGQWG---ACKTCFQAKAKRYAVPKTTD-ERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKHKMAPKGEKCAFMG-------------------IPRNF-------------PTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALP---ALRKLTIDGNVPPMLPSRTRSRRPHT----------------------NVEEAVMHCFLPTIEEADVEDALACDDGGQ--MAMHATLDI---QEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            HR + H S  I  +      + G+  T +      C +C QAK  R  VPK  + +R    G R   DV GP +  +LGG  Y   F DD TR+  +  ++ KS T +A  S  A        +IK +++D GGE+   EF   L         T  DTPQ+NG+AER    L E A A++   +    +P+  LW +AM  A  + N++ T + DG K+P+E+ +G +P    L  FGA  + R      K+  K  +  F+G                   + RN              P G +  ++       H+ +Q+ K         S +   P++P   A  +   D N  P  P+  RS RP                           + +    L      + E++ +  +G +   AM A   +   QEP++  +AM+SP+W  W+KA E E+R + D+  Y  V   ++  VVG+K +++ K   +GK+  YK RLVAQGF QI G+ + + ++P    ASIR++LA AA  D ++   D + A+L AD++EE+++
Sbjct:  529 HRRMGHISPIIAERLVREGRVEGVRLTDKANKEKTCNSCIQAKITRATVPKERESDRTKELGDRVRSDVWGPAQTETLGGKKYFTSFTDDATRWTDLYLLRAKSGTFSAYKSYEAKLKNQDGKTIKALQSDRGGEYLSREFTDHLTTHGTVSRLTVHDTPQHNGLAERINRTLPEHARAMLIAAE----LPKN-LWGEAMMHATWLKNRTSTRALDG-KTPFEVRYGHLPDLGDLHEFGAKVWVRIE-NAGKLDSKAREGRFVGYSTESKGYRVYWPDKRAVSVERNVRFIDETVIADEAQPEGVIEAVVPSSPSTLHQPQQKPKSHTEPPAPSSVNP--PSMPTSDAPAQEHKDENHAPEAPAE-RSHRPRKASAYVKRLNDGSGVADGRKSRPKYPQGLQPGDLMGAAAVEAEESESEQEGDEPIFAMPAAFAVREGQEPRSLEEAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFM 1087          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A445IW95_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445IW95_GLYSO)

HSP 1 Score: 189 bits (479), Expect = 9.110e-47
Identity = 174/637 (27.32%), Postives = 287/637 (45.05%), Query Frame = 0
Query:   20 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQW-----EKPLIYYRD---KAVLGFPEDESLAFNF---CPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTTG---QWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELS-IKYVRTDNGGEFEG-EFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVR-KHKMAPKGEKCAFMGIPRN-----FPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALP--ALRKLTIDGNVPPMLPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            V+ +D   L  +G G++ +     G +     + DV +VPG+  NLLS  + +E+      E  ++   D   K +L  P  ++  F        +  F+ T         V+     +E    H    H +  D+ +  +  M +G          C  C Q K  R    +    RA  K +  + DV GPM+  SLGGN Y + F+D+ TR   V  ++RKSD    +     +    Q  S IK +RTD GGE+   EFQ   D+  I HE TPP TPQ+NG AER    +     +++K      ++P+  LW +A+  A  + N S +   +G+ +P E W G  P   H R FG++ +     + + K+  KGE+   +G         F   +  ++++++            E  + +   + +++GP++   +  + T +GN      +  R  R   N  +         + +ADV    + D  G +   A     EP N   AM    W +   A   E++ +  N V++ V++ K K  +  K +YK K   +GKVVKYK RLVA+GF Q  G+ Y E ++P     +IR ++A A+ K+  +   D + AFL   +DEE+Y+
Sbjct: 1061 VKFADDRILTAEGIGKVLIKTKDGGQSC----ITDVLFVPGMKSNLLSLGQLLEKGFMTKLENKMLRVFDRNHKLILKSPLSKNRTFKIEIDVIEQKCFTTT---------VN-----SEEWLWHYRFGHLNFRDLIKLNSREMVLGLPQIKPPSEVCDGCLQCKQSRSTFKQNVPIRAKEKLEVIYSDVCGPMQTESLGGNKYFISFIDELTRKVWVYLIRRKSDVFE-VFEKFKNMAEKQSGSLIKILRTDGGGEYVSTEFQEFCDQEGIIHEVTPPYTPQHNGAAERKNRTIMNMVRSMLKGK----SLPKY-LWGEAVSTAVFILNMSPSKRLEGI-TPEEAWSGAKPNVSHFRIFGSLCFRHIPDQLRRKLDDKGEQMILLGYHSTGGYKLFDPKSKKIIISRDVVFD--------ESRSWNWEQNTEMKGPSIMIRSEEEETSEGNGN----TTQREVRRQRNAPKPARFQGFEMLSDADV----SAD--GNLVHFALFSEAEPINFEDAMTDQRWVE---AMTEELKSIEKNQVWELVSQPKSKKPIDVKWIYKIKTNPEGKVVKYKARLVAKGFLQKAGIDYREVFAPVARIETIRTVVAIASLKNWTMHQLDVKCAFLNGPLDEEVYV 1651          
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Match: A0A8J6HA52_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HA52_TENMO)

HSP 1 Score: 188 bits (478), Expect = 9.650e-47
Identity = 173/679 (25.48%), Postives = 292/679 (43.00%), Query Frame = 0
Query:   20 VEISDGNTLPVDGFGRIEMDMDQPGHTPKRVKMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPED--ESLAFNFCPRKG-----LFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPS-EDITRKTTEMMGIGTT----GQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKHSSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSIKYVRTDNGGEF-EGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWFGTIPTADHLRPFGAMGYARRSVRKH-KMAPKGEKCAFMGIP------RNFPTGTVSVLLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPMLPS-------RTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHA----------------------------------------TLDIQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGTKMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRMLLATAAAKDGELRHFDAEQAFLTADIDEELYI 631
            V +++G +  V G GR E+          +V +++V YVP ++ NLLS  +  +              +GF  +  E    N    KG     ++ +T   R    + ++     ++ S HR   H   ED+ +   + M  G      G    C+ C + K  R  +PK    RA+   +    D+ GPM++++  G  Y +  +DDY+RF  V F+K KS+ +  +   I       E  +K +R+DNG E+   E QR L    I  ++T P +   NGVAER    L E A  ++ + +      ++K WA+A+  AC + N   + + D  K+P+ELW    P   HL  FG  GYA     K  K+  K     F+G        R   T T  + ++++  +     ++++E E GS   +   E   +   R    D N P               S     N ++  ++    ++ E +   +LA D   + ++ A                                          D +EPKNR +A+   +  DW +A   E++ + +N  +   T  + +  +G K ++KRK   +  ++KYK RLVAQGF Q  G  Y E ++P     ++R+LLA A  +  ++ HFDA+ AFL  ++ E +Y+
Sbjct:  299 VTVANGESAKVLGIGRGELHCLNGKDEAVKVCLENVLYVPDLTENLLSVKRLAKTGHS----------VGFTGEQCEISKNNIVIAKGKLSPDMYELTVPHRSLAVKQNQHTPNCQH-SWHRRFGHRHPEDVQKLEIKKMATGLKIQDCGIREVCECCIKGKMSRCPIPKKATTRATSVLELVHTDLCGPMQNATPSGKRYFMTMIDDYSRFTQVYFLKFKSEVSKFINEYIKYAENKFEKKVKVIRSDNGREYITKELQRSLTEMGIKVQYTAPYSAFQNGVAERKNRTLMEAARCMLIDAEI-----KKKYWAEAVNTACYLQNILPSKAVD--KTPFELWNRRKPDVKHLHIFGCKGYAHLPKEKRRKLDEKAISLTFVGYSAESKAYRMLDTATDKITISRDVKIIERDLKREEENEKGSSQENKSTERRKIVENR----DENTPESGQEVNYSEDIEIISENELENEQDQGLNESSESLNEFEETQSLAMDSVLEQSLPAGDEEYVFQGNLDDLNNQEVRVSERPTKGQPPDRFKPQANIVRDHEEPKNRTEALSGVDKHDWIRAMNEEMKALTENSTWVLTTLPEGRKTIGCKWVFKRKKNANTGLIKYKARLVAQGFSQKYGTDYDEVFAPVVRATTLRLLLAIATQRKLKIHHFDAKTAFLNGELKETIYM 955          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46862.11784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT1.560e-5228.20Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6A3K5Y5_9STRA4.490e-5227.31Uncharacterized protein n=4 Tax=Phytophthora rubi ... [more]
A0A7D9HXK4_PARCT2.950e-5030.48Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A445JBB1_GLYSO3.470e-5027.55Retrovirus-related Pol polyprotein from transposon... [more]
B1PJ47_PHATR1.160e-4927.00Gag-pol polyprotein n=1 Tax=Phaeodactylum tricornu... [more]
A0A7D9D6Q5_PARCT2.560e-4827.20Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2N9FYK2_FAGSY5.110e-4826.22Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A401GQU1_9APHY1.290e-4728.65Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A445IW95_GLYSO9.110e-4727.32Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6HA52_TENMO9.650e-4725.48Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 535..631
e-value: 8.1E-20
score: 71.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 176..367
e-value: 5.3E-24
score: 86.5
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 187..299
e-value: 5.9E-16
score: 58.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 172..353
score: 20.171
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 250..388
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 428..619
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 250..388
coord: 428..619
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 188..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46862contigH-elongata_contig46862:870..3107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46862.11784.1mRNA_H-elongata_contig46862.11784.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig46862 870..3128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig46862.11784.1 ID=prot_H-elongata_contig46862.11784.1|Name=mRNA_H-elongata_contig46862.11784.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=631bp
MSHTRAGMSAYKKASPGMTVEISDGNTLPVDGFGRIEMDMDQPGHTPKRV
KMDDVAYVPGISRNLLSTLKPVEQWEKPLIYYRDKAVLGFPEDESLAFNF
CPRKGLFSVTGVRRIPRQEVDRGARLAENGSVHRMLAHPSEDITRKTTEM
MGIGTTGQWGACKTCFQAKAKRYAVPKTTDERASVKGQRFFVDVGGPMKH
SSLGGNSYVVIFVDDYTRFKVVKFVKRKSDTTAALLSLIADYITSQELSI
KYVRTDNGGEFEGEFQRELDRRSITHEHTPPDTPQYNGVAERALGLLREK
AIALMKELDNIINVPREKLWAQAMFFACDVTNKSVTTSTDGVKSPYELWF
GTIPTADHLRPFGAMGYARRSVRKHKMAPKGEKCAFMGIPRNFPTGTVSV
LLTQEAFLKHEQEQQQKEGEAGSVSGSADLEGPALPALRKLTIDGNVPPM
LPSRTRSRRPHTNVEEAVMHCFLPTIEEADVEDALACDDGGQMAMHATLD
IQEPKNRRQAMESPEWDDWRKAEEIEIRGMVDNCVYKQVTRSKDKLVVGT
KMLYKRKVGQDGKVVKYKCRLVAQGFWQIEGVHYTEKYSPTPLTASIRML
LATAAAKDGELRHFDAEQAFLTADIDEELYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf