mRNA_H-elongata_contig46617.11761.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46617.11761.1
Unique NamemRNA_H-elongata_contig46617.11761.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: D7G4R0_ECTSI (Ribosomal large subunit pseudouridine synthase A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R0_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 2.170e-121
Identity = 172/219 (78.54%), Postives = 191/219 (87.21%), Query Frame = 1
Query:    1 VEWHSGNKRQRQNFWTEVVHNACNGLLENDTTKGEEEFRGHLRRLTKENNVPRKRTKFDNYMAVTLGLEGDDRDKVSTRVWDAVDSRLKLEAGPGVDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            VEWHSG KRQRQ FWT+VVH AC  LL ++ T+GEEEFR HLRRLTKENNVPRKR+KF NY AVTLGLEG++ DKVS R+WD VD  LK E GPGVDCLLTRVQ+RWP ARHVHRLDQDTSGLVVMALT EAAREMCRQFRERVPSKTYTAV+EGRM KT KSGEV AK+RPD DNRP+QMF +E GNEA T W+R+KR++DRT VDFTPVTGRTHQ++
Sbjct:   60 VEWHSGTKRQRQEFWTDVVHTACESLLNDEKTEGEEEFRDHLRRLTKENNVPRKRSKFHNYTAVTLGLEGEEGDKVSARLWDTVDGHLKKEVGPGVDCLLTRVQSRWPEARHVHRLDQDTSGLVVMALTVEAAREMCRQFRERVPSKTYTAVLEGRMAKTPKSGEVTAKLRPDTDNRPKQMFCEEKGNEAHTNWERIKRKEDRTWVDFTPVTGRTHQIR 278          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A7S2WNF9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNF9_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.690e-29
Identity = 75/175 (42.86%), Postives = 113/175 (64.57%), Query Frame = 1
Query:  148 NVPRKRTKFDNYMAVTLGLEGDDRDKVSTRVWDAVDSRL-KLEAGPGV---DCLLTRVQARWP-TARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            +VPRK  KF +Y   +L +E  D   V  +VWD + S++ + EA  G+   D +L+RV+     TA  VHRLD +TSG+++++L  +  RE+ RQFRERV  KTY A+V G + + +  G+V   +  D D+RPRQ+ D+  G EA T ++ V+R +DRT+V+  PVTGRTHQ++
Sbjct:    5 SVPRKLVKFRSYAQRSLRIEAGD---VVEQVWDIISSKMAEEEAQEGLEETDSVLSRVKTHIDRTAVAVHRLDCETSGVMLVSLNVDVTRELGRQFRERVVQKTYFAMVHGVVDQDE--GQVSVPLSADPDHRPRQVVDEVKGKEATTTYRVVQRFEDRTKVELHPVTGRTHQLR 174          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A1M6B4V3_9RHOB (Pseudouridine synthase n=2 Tax=Shimia gijangensis TaxID=1470563 RepID=A0A1M6B4V3_9RHOB)

HSP 1 Score: 114 bits (285), Expect = 5.630e-28
Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 1
Query:  250 VDSRLKLEAGPG-----VDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            VD    L + PG      DCLLTR+Q  +PTA  VHRLD+DTSG++V  LTP A R +  QF +R   KTY A +EGRM   +KSG V   +  D +NRPRQM   + G +A T W+ +K  DD TRV  +P +GRTHQ++
Sbjct:   16 VDKPAGLLSVPGRGDHLADCLLTRLQVAFPTALLVHRLDRDTSGVLVFGLTPHAQRNLSMQFEKRSTKKTYVARLEGRME--EKSGTVDLPLIVDWENRPRQMVCHDTGKQAVTDWRVLKVSDDDTRVRLSPKSGRTHQLR 154          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A7W2BME3_9HYPH (RNA pseudouridine synthase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W2BME3_9HYPH)

HSP 1 Score: 114 bits (285), Expect = 9.260e-28
Identity = 66/141 (46.81%), Postives = 87/141 (61.70%), Query Frame = 1
Query:  250 VDSRLKLEAGPG-----VDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            +D    L + PG     +DCL+TR+  R+P AR VHRLD DTSG++V+A+ P A R +  QF  R   KTY A+V+G +     SG V   IR D  NRPRQM D   G  A T WQ + REDDR+R+   P+TGR+HQ++
Sbjct:   36 IDKPCGLLSVPGKGDDRLDCLITRLHKRYPQARIVHRLDLDTSGVMVIAMNPAAHRHLGLQFERRHVEKTYIALVDGNVAAD--SGRVDLPIRVDWPNRPRQMIDHAEGRSAVTDWQVLAREDDRSRIALRPLTGRSHQLR 174          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A099F4N7_9RHOB (Pseudouridine synthase n=1 Tax=Paracoccus halophilus TaxID=376733 RepID=A0A099F4N7_9RHOB)

HSP 1 Score: 114 bits (284), Expect = 9.460e-28
Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 1
Query:  289 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            DCL+ R++A +PT   VHRLD DTSG++V ALTPEA R + RQF ER   KTY A + GR+    K+G V   +  D  NRPRQM D++ G  ART W+ V+ +D  TRV  +PVTGR+HQ++
Sbjct:   42 DCLIARLRAAFPTILLVHRLDLDTSGVMVFALTPEAQRHLSRQFEERRTKKTYVARLWGRLQ--PKTGTVDLPLIVDWPNRPRQMVDRDRGRPARTDWRVVRADDMETRVRLSPVTGRSHQLR 162          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A1G3AV14_9BACT (Pseudouridine synthase n=2 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A1G3AV14_9BACT)

HSP 1 Score: 114 bits (284), Expect = 1.180e-27
Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  289 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            DCL+ RVQ R+P AR VHRLD  TSGL+V+A  PE+ RE+ RQF+ R   KTY A V G     + SGEV   +R D + RP Q+ D + G  A+T WQ ++R +D  R++ TPVTGRTHQ++
Sbjct:   49 DCLIHRVQKRFPKARIVHRLDFSTSGLMVIAQNPESHRELSRQFQNRETEKTYVAKVYG--CPDEPSGEVNLPLRCDLERRPLQIIDYQQGKTAQTFWQILERYEDSCRMELTPVTGRTHQLR 169          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: UPI00106F1B88 (RluA family pseudouridine synthase n=2 Tax=Paracoccus TaxID=265 RepID=UPI00106F1B88)

HSP 1 Score: 113 bits (283), Expect = 1.330e-27
Identity = 66/141 (46.81%), Postives = 86/141 (60.99%), Query Frame = 1
Query:  250 VDSRLKLEAGPG-----VDCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            VD    L + PG      DCL+ R++A +PT   VHRLD DTSG++V ALTP A R + +QF  R   K+Y A V GRM +   +G V A +  D  NRPRQM D E G  ART W+ ++  DD TRV   P+TGR+HQ++
Sbjct:   24 VDKPAGLLSVPGRGEDRADCLIARLRAAFPTVLLVHRLDLDTSGVMVFALTPHAQRHLNQQFERRQVKKSYVARVHGRMDRP--TGTVEAALIVDWPNRPRQMIDPENGRPARTDWRVIRASDDETRVRLFPLTGRSHQLR 162          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A2Z4UKY3_9HYPH (Ribosomal large subunit pseudouridine synthase A n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UKY3_9HYPH)

HSP 1 Score: 113 bits (283), Expect = 1.580e-27
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 1
Query:  289 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            DCL TR +  +PTA  VHRLD DTSG++VMA+TP A R +  QF +R   KTYTA V G+MT+ +  G VVA I  D  NRPRQM D E G  A T WQ + RE   +RV   P TGR+HQ++
Sbjct:   48 DCLETRARIEFPTATIVHRLDMDTSGILVMAMTPNAHRHLGLQFEKRKTKKTYTARVWGKMTEDE--GTVVAPIITDWPNRPRQMIDFEKGRSAETRWQVLDREAGASRVALYPHTGRSHQLR 168          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: UPI00047597A7 (RluA family pseudouridine synthase n=1 Tax=Desulfovibrio oxyclinae TaxID=63560 RepID=UPI00047597A7)

HSP 1 Score: 113 bits (282), Expect = 1.780e-27
Identity = 61/126 (48.41%), Postives = 85/126 (67.46%), Query Frame = 1
Query:  289 DCLLTRVQARWPTARH---VHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            DC++TRVQ  +P  R    VHRLD DTSG++V+ LT  A RE+ +QF +R  SK Y A+++G +   ++ G V   +R D DNRP Q+ D E G  A TLW+R+  E+ RTRV+F P+TGRTHQ++
Sbjct:   36 DCVVTRVQEMFPECRKYPTVHRLDMDTSGILVLGLTARAQRELSQQFHDREVSKRYVALLDGVLE--EEEGRVDLPLRLDVDNRPYQVVDFERGKPATTLWKRIAIENGRTRVEFVPLTGRTHQLR 159          
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Match: A0A2D5B3Y4_9BACT (RNA pseudouridine synthase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5B3Y4_9BACT)

HSP 1 Score: 113 bits (283), Expect = 1.790e-27
Identity = 60/123 (48.78%), Postives = 85/123 (69.11%), Query Frame = 1
Query:  289 DCLLTRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYTAVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKREDDRTRVDFTPVTGRTHQVQ 657
            DCL +R +A +P AR VHRLD+DTSG++VMA   +  RE+ RQF +R   K Y AVV GR+   D  G + A +R D D+ PRQ+ D E G  A+T ++ ++R DDRTR++ +PVTGR+HQ++
Sbjct:   53 DCLASRAEAAFPGARIVHRLDRDTSGVIVMARDADTHRELSRQFHDREVDKQYEAVVGGRLAVDD--GVIDAPMRKDLDDPPRQIIDDEQGRSAKTGFRVIERMDDRTRMELSPVTGRSHQLR 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46617.11761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4R0_ECTSI2.170e-12178.54Ribosomal large subunit pseudouridine synthase A n... [more]
A0A7S2WNF9_9STRA1.690e-2942.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1M6B4V3_9RHOB5.630e-2848.23Pseudouridine synthase n=2 Tax=Shimia gijangensis ... [more]
A0A7W2BME3_9HYPH9.260e-2846.81RNA pseudouridine synthase n=1 Tax=Hyphomicrobiale... [more]
A0A099F4N7_9RHOB9.460e-2851.22Pseudouridine synthase n=1 Tax=Paracoccus halophil... [more]
A0A1G3AV14_9BACT1.180e-2750.41Pseudouridine synthase n=2 Tax=unclassified Planct... [more]
UPI00106F1B881.330e-2746.81RluA family pseudouridine synthase n=2 Tax=Paracoc... [more]
A0A2Z4UKY3_9HYPH1.580e-2752.85Ribosomal large subunit pseudouridine synthase A n... [more]
UPI00047597A71.780e-2748.41RluA family pseudouridine synthase n=1 Tax=Desulfo... [more]
A0A2D5B3Y4_9BACT1.790e-2748.78RNA pseudouridine synthase n=1 Tax=Phycisphaerae b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46617contigH-elongata_contig46617:102..1858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.9
Seed ortholog evalue4.2e-97
Seed eggNOG ortholog2880.D7G4R0
EggNOG free text desc.pseudouridine synthase activity
EggNOG OGsCOG0564@1,KOG1919@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPseudouridine synthase, RsuA/RluB/C/D/E/F
Ec32 orthologEc-20_000700.1
Exons5
Model size657
Cds size657
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46617.11761.1prot_H-elongata_contig46617.11761.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46617 102..1858 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930771.7355614-CDS-H-elongata_contig46617:101..2181622930771.7355614-CDS-H-elongata_contig46617:101..218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 102..218 -
1691679563.050242-CDS-H-elongata_contig46617:101..2181691679563.050242-CDS-H-elongata_contig46617:101..218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 102..218 -
1622930771.7532437-CDS-H-elongata_contig46617:494..6041622930771.7532437-CDS-H-elongata_contig46617:494..604Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 495..604 -
1691679563.062759-CDS-H-elongata_contig46617:494..6041691679563.062759-CDS-H-elongata_contig46617:494..604Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 495..604 -
1622930771.7682524-CDS-H-elongata_contig46617:807..9201622930771.7682524-CDS-H-elongata_contig46617:807..920Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 808..920 -
1691679563.0706477-CDS-H-elongata_contig46617:807..9201691679563.0706477-CDS-H-elongata_contig46617:807..920Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 808..920 -
1622930771.780989-CDS-H-elongata_contig46617:1186..13391622930771.780989-CDS-H-elongata_contig46617:1186..1339Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 1187..1339 -
1691679563.0785902-CDS-H-elongata_contig46617:1186..13391691679563.0785902-CDS-H-elongata_contig46617:1186..1339Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 1187..1339 -
1622930771.7948055-CDS-H-elongata_contig46617:1694..18581622930771.7948055-CDS-H-elongata_contig46617:1694..1858Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 1695..1858 -
1691679563.086862-CDS-H-elongata_contig46617:1694..18581691679563.086862-CDS-H-elongata_contig46617:1694..1858Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46617 1695..1858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46617.11761.1

>prot_H-elongata_contig46617.11761.1 ID=prot_H-elongata_contig46617.11761.1|Name=mRNA_H-elongata_contig46617.11761.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
VEWHSGNKRQRQNFWTEVVHNACNGLLENDTTKGEEEFRGHLRRLTKENN
VPRKRTKFDNYMAVTLGLEGDDRDKVSTRVWDAVDSRLKLEAGPGVDCLL
TRVQARWPTARHVHRLDQDTSGLVVMALTPEAAREMCRQFRERVPSKTYT
AVVEGRMTKTDKSGEVVAKIRPDRDNRPRQMFDQEGGNEARTLWQRVKRE
DDRTRVDFTPVTGRTHQVQ
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mRNA from alignment at H-elongata_contig46617:102..1858-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46617.11761.1 ID=mRNA_H-elongata_contig46617.11761.1|Name=mRNA_H-elongata_contig46617.11761.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1757bp|location=Sequence derived from alignment at H-elongata_contig46617:102..1858- (Himanthalia elongata Himel1 dioecious)
GTGGAGTGGCACAGCGGCAACAAACGACAGAGGCAAAACTTCTGGACGGA GGTGGTGCACAATGCCTGCAACGGACTGTTGGAAAATGACACCACGAAGG GAGAAGAGGAATTCCGAGGCCACCTGCGCCGTCTGACCAAGGAAAATAAC GTGCCAAGGAAGAGGTGTGCACATGACGTCATGAGGGCAAGTTGGCGACG TGATCTGTGCAGAATCGGCATGGCTGGACTGCATCGGTTGTTGGCCCTTG ATCTCGTACCGTGACTGGGAGATTCGAGGATGCTCTGAGGTTTCATGCCC GCTCTAGCTGCACACCCCGCGTCTAATCATCTGGCACCATCGCTGCATTT GGCTGGTGTCGATGATGGTGGATTATGACGTAGCCTACCATTACGCCCAC CTTACAGTTCTCCGCTCTATGAGCCTTGTCCTGTCCGGCAGTTTGTACTG GACCTCGATTTTTGTCTACTTCATTTCTTCCTACTTCCTACGTGACTCTT ATCTGCTCGTATGTTTCAGGACCAAATTTGACAATTACATGGCGGTAACC TTGGGTCTAGAAGGAGATGATCGAGATAAGGTATCGACTCGTGTTTGGGA TGCGGTAGACAGCCGGCTAAAGCTCGAAGCGGGTCCCGGCGTAGACTGCC TTCTCACGAGAGTTCAAGCCAGGTTGGTGGATTATTGTGACAAGTCTGGA TAACTACATAGGTTCCGTGCGATCGGGTCGAATAAACGATATCGAGAGCA AAAGAGCAGAACACGCAAGTTGCTGATCACGTCGCCCGAGTTTTTTCGCC CCTAAATCGTGGGACAGCCTGGTTTTCCACGAGGAACACATATATACATG TGTTTTCCCCCGCGTGGCCTTAGGCATGTAAGATTGCACCCACGAAACGA TCAGCGCGTTTTCTCGATGGCTTGTTTCCGTTGCGCAGGTGGCCTACCGC TCGCCATGTCCATCGCCTGGATCAGGACACTTCGGGGTTGGTTGTCATGG CCCTCACACCCGAGGCGGCGAGGGAGATGTGTAGACAGTTTCGCGAAAGA GGTGAGAAATCATGAGCCTCACGGTGATGGATCAATGGATGAAGTGCGGC AGGGGGGTATGATGTCCGGACGGAGCCTGGTCCCCACGCCTTCCTCTTTA CTTGCGGGGCAACCAAACCGAACCGTTTGAAGGTGGATTTAATCATTCCT AAAAATGAAAAAGGGCGTTTTGGCTCCTGAATTCGTTTGCCACCTTGCCA TCAGTACCCTCCAAGACGTACACAGCGGTAGTAGAGGGAAGGATGACCAA AACTGACAAGAGTGGCGAAGTGGTGGCCAAGATACGCCCGGATAGAGATA ATCGTCCTCGGCAGGTGAGTAAAAGGCGGAGACCAGAAGCGCGACGTGAT ATCTTACTCTTCGATAAGCGGCCATGGGGGATGGTCGACGTGTAGTAAAC AAGCGGCCAGACAAATGTAGGTGGGTTATCTAGGCGAAGCTCTCTTGAAT CTTGCTGTATGACAAAATTTCTGTCATTGGCTTCGGCAGAGCGAGACTCC AGACGTGTGCTGTCGACGCTTTGAAATATTGATCACCTGACTCTCGGTCG TTTTCTTTCCCTGGTCGACCGTTACGATGTTACGATGTAGATGTTCGACC AGGAGGGTGGCAACGAAGCGCGTACTCTTTGGCAACGGGTGAAGAGGGAG GACGATCGGACGAGAGTAGACTTCACCCCAGTGACAGGGAGGACTCATCA GGTCCAA
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Coding sequence (CDS) from alignment at H-elongata_contig46617:102..1858-

>mRNA_H-elongata_contig46617.11761.1 ID=mRNA_H-elongata_contig46617.11761.1|Name=mRNA_H-elongata_contig46617.11761.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1314bp|location=Sequence derived from alignment at H-elongata_contig46617:102..1858- (Himanthalia elongata Himel1 dioecious)
GTGGAGTGGCACAGCGGCAACAAACGACAGAGGCAAAACTTCTGGACGGA
GGTGGTGCACAATGCCTGCAACGGACTGTTGGAAAATGACACCACGAAGG
GAGAAGAGGAATTCCGAGGCCACCTGCGCCGTCTGACCAAGGAAAATAAC
GTGCCAAGGAAGAGGTGGAGTGGCACAGCGGCAACAAACGACAGAGGCAA
AACTTCTGGACGGAGGTGGTGCACAATGCCTGCAACGGACTGTTGGAAAA
TGACACCACGAAGGGAGAAGAGGAATTCCGAGGCCACCTGCGCCGTCTGA
CCAAGGAAAATAACGTGCCAAGGAAGAGGACCAAATTTGACAATTACATG
GCGGTAACCTTGGGTCTAGAAGGAGATGATCGAGATAAGGTATCGACTCG
TGTTTGGGATGCGGTAGACAGCCGGCTAAAGCTCGAAGCGGGTCCCGGCG
TAGACTGCCTTCTCACGAGAGTTCAAGCCAGGACCAAATTTGACAATTAC
ATGGCGGTAACCTTGGGTCTAGAAGGAGATGATCGAGATAAGGTATCGAC
TCGTGTTTGGGATGCGGTAGACAGCCGGCTAAAGCTCGAAGCGGGTCCCG
GCGTAGACTGCCTTCTCACGAGAGTTCAAGCCAGGTGGCCTACCGCTCGC
CATGTCCATCGCCTGGATCAGGACACTTCGGGGTTGGTTGTCATGGCCCT
CACACCCGAGGCGGCGAGGGAGATGTGTAGACAGTTTCGCGAAAGAGGTG
GCCTACCGCTCGCCATGTCCATCGCCTGGATCAGGACACTTCGGGGTTGG
TTGTCATGGCCCTCACACCCGAGGCGGCGAGGGAGATGTGTAGACAGTTT
CGCGAAAGAGTACCCTCCAAGACGTACACAGCGGTAGTAGAGGGAAGGAT
GACCAAAACTGACAAGAGTGGCGAAGTGGTGGCCAAGATACGCCCGGATA
GAGATAATCGTCCTCGGCAGTACCCTCCAAGACGTACACAGCGGTAGTAG
AGGGAAGGATGACCAAAACTGACAAGAGTGGCGAAGTGGTGGCCAAGATA
CGCCCGGATAGAGATAATCGTCCTCGGCAGATGTTCGACCAGGAGGGTGG
CAACGAAGCGCGTACTCTTTGGCAACGGGTGAAGAGGGAGGACGATCGGA
CGAGAGTAGACTTCACCCCAGTGACAGGGAGGACTCATCAGGTCCAAATG
TTCGACCAGGAGGGTGGCAACGAAGCGCGTACTCTTTGGCAACGGGTGAA
GAGGGAGGACGATCGGACGAGAGTAGACTTCACCCCAGTGACAGGGAGGA
CTCATCAGGTCCAA
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