mRNA_H-elongata_contig46418.11733.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A6H5J694_9PHAE (HORMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J694_9PHAE) HSP 1 Score: 300 bits (769), Expect = 1.300e-101 Identity = 153/184 (83.15%), Postives = 165/184 (89.67%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNT--QAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 552
V SVLYQRGVYHPD FAREAKY ITTLVTTDE LKKYL+NVI+QLK WLL+ ELQRLVLVIVGTDSG+TLERWTFNVHKEERP L+DGSN Q RKS+K I +EIQNVIRQITSSVTFLP+LDEPCSFDLLVYT NDA VP+GWD+SD +CIKDSSEV LRSFSTKIHKVDTVVSYKN+ DE
Sbjct: 31 VNSVLYQRGVYHPDGFAREAKYGITTLVTTDEALKKYLDNVIKQLKEWLLEKELQRLVLVIVGTDSGDTLERWTFNVHKEERPALKDGSNAGDQQPRKSQKAITQEIQNVIRQITSSVTFLPLLDEPCSFDLLVYTGNDATVPSGWDDSDPRCIKDSSEVSLRSFSTKIHKVDTVVSYKNKTDE 214
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A836CIY9_9STRA (DNA-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY9_9STRA) HSP 1 Score: 208 bits (530), Expect = 3.240e-65 Identity = 109/193 (56.48%), Postives = 143/193 (74.09%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKG--------WLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPV-LQDGS-NTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDEL 555
+ S+LYQRG+Y +SF+++ KY +T + T D GLK YL+NVI+Q+ G W+L E+QRLVLVI G +SGE LERW F+V E P L++ S N A RKS+K+I EIQ +IRQIT+SVTFLP+L EPC+FDLLVYT+ A VP W+ESD + I DSS+VKLRSFSTK+HKVDT+V+++N+ D L
Sbjct: 29 INSILYQRGIYPAESFSKQQKYGLTMMTTEDMGLKAYLDNVIKQMHGKWPSKLCRWMLRDEVQRLVLVISGVESGEALERWAFHVQGEPAPAPLKEASGNAPAPRKSQKDICNEIQAIIRQITASVTFLPLLSEPCAFDLLVYTNKSATVPIQWEESDPRYIADSSQVKLRSFSTKVHKVDTLVAFRNQSDAL 221
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A7S1G3K4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3K4_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.310e-64 Identity = 102/182 (56.04%), Postives = 135/182 (74.18%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 552
+ S+LYQRG+Y P+SF+ ++Y ++ LVTTD+GLK YL V+ QL WL E+Q+LV+VI G DSG+ LERW FNV ++ G V KS KEI+KEIQ +IRQIT+SV+FLP+LDEPC+FDLLVYTD D VP W+ESD + I +S+EV+LRSF+TK+HKVD +V+YK D+
Sbjct: 31 INSILYQRGIYPPESFSAVSQYGLSMLVTTDDGLKGYLSQVLGQLSSWLSRGEVQKLVVVITGVDSGDVLERWVFNVETDKSITASGGG----VEKSAKEIQKEIQAIIRQITASVSFLPLLDEPCTFDLLVYTDADTDVPRSWEESDPQYISNSTEVRLRSFTTKVHKVDAMVAYKTGDDD 208
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A2R5FZ78_9STRA (Mitotic spindle assembly checkpoint protein MAD2A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FZ78_9STRA) HSP 1 Score: 205 bits (521), Expect = 5.470e-64 Identity = 102/182 (56.04%), Postives = 138/182 (75.82%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 552
+ S+LYQRG+Y P++F R +KY + LVT DE L YLE V++QL+ WL++ +Q+LVLVI G +S E LERW FNV + + V G+ +A +K +KEI EIQ +IRQIT+SVTFLP+L+EPC+FDLLV+TD D +VP W+ESD + I D+++VKLRSF+TKIHKVDT VSY+N D+
Sbjct: 28 INSILYQRGIYPPETFKRVSKYGLALLVTEDEFLSNYLEQVLKQLESWLMEGTVQKLVLVITGVESKEVLERWVFNVEAD-KSVTATGNPLEAKQKPRKEIMNEIQAIIRQITASVTFLPLLNEPCTFDLLVHTDCDTEVPQTWEESDPRHIADATDVKLRSFTTKIHKVDTCVSYRNCVDD 208
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A8J5XKU7_DIALT (HORMA domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKU7_DIALT) HSP 1 Score: 204 bits (520), Expect = 5.630e-64 Identity = 104/181 (57.46%), Postives = 134/181 (74.03%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPD 549
V S+LYQRG+Y P++F + +KY +T LVTTD GL YLE V+ QL WL+D +Q+LV+VI G +SG+TLERW F+V ++ P DG++ +A + +KE+ EIQ +IRQIT+SVTFLP+LDE C+FDLLVYTD D VP+ W+ESD K I S EVKLRSF+TKIHKVD VSY D
Sbjct: 26 VNSILYQRGIYPPETFKKVSKYGLTMLVTTDAGLSDYLEQVLSQLSMWLIDRSVQKLVVVIAGQESGKTLERWVFDVRADKLP---DGASVEA--RPEKELTSEIQAIIRQITASVTFLPLLDEACTFDLLVYTDTDVNVPSAWEESDPKYIAKSEEVKLRSFTTKIHKVDAAVSYLAEDD 201
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A6U9WAU7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9WAU7_9STRA) HSP 1 Score: 205 bits (522), Expect = 6.400e-64 Identity = 104/198 (52.53%), Postives = 139/198 (70.20%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVL-----------------QDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPD 549
+ S+LYQRG+Y P++F RE+KYD+T L TTD+GL KYL V+ Q++ WLL+ ++QRLV+V+ G DSGETLERW FNV ++ + DG+ + RK KEI EIQ +IRQIT+SVTFLP+L+EPCSFDLLVYT DA VP+ W++SD I +S EVKLRSF+T +HKVD++V+Y+ D
Sbjct: 27 INSILYQRGIYQPETFKRESKYDLTVLTTTDDGLLKYLSQVMAQMESWLLNGDVQRLVVVVSGVDSGETLERWQFNVALDDEAGVAGTDENRAPNPNVNDSNSDGNINKKNRKRLKEIHNEIQAIIRQITASVTFLPLLNEPCSFDLLVYTKKDAAVPSKWEDSDPCYIMNSQEVKLRSFTTSVHKVDSMVAYREAED 224
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A061QUQ8_9CHLO (Mitotic spindle assembly checkpoint protein MAD2 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUQ8_9CHLO) HSP 1 Score: 202 bits (514), Expect = 6.310e-63 Identity = 101/183 (55.19%), Postives = 134/183 (73.22%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDEL 555
V S+LYQRGVY P+SF + KY + ++T+DE L +YL NV++QL WLL+ +LQRLVLV+ S E LERW FN+ ++ + N KSKKEI EIQ +IRQIT+SVTFLP+LDE CSFDLL+YTD +A VP W+ESD++ I +++EVKLRSFSTK+HK+D++V+YK D L
Sbjct: 28 VNSILYQRGVYPPESFEGQKKYGLNMMITSDEKLTEYLNNVLKQLHEWLLNRQLQRLVLVVSSIQSKEVLERWAFNIETDKEVLSARDPNLVKREKSKKEITSEIQAIIRQITASVTFLPLLDESCSFDLLMYTDANADVPQQWEESDARFISNAAEVKLRSFSTKVHKIDSMVTYKMEDDNL 210
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A7S3PXY9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXY9_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.150e-62 Identity = 104/197 (52.79%), Postives = 142/197 (72.08%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVH---KEERPVLQDGS-------NTQAVR----------KSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYK 537
+ S+LYQRG+Y P++F RE+KY +T L TTDEGL KYL N++ Q++ WLLD ++QRLV+V+ G DSGETLERW FNV KE++ +G+ NT+ + KS ++I EIQ +IRQIT+SVTFLP+L+EPCSFDLLVYT+ A VP W++SD + I +S EVKLRSF+T +HKV+++V+YK
Sbjct: 27 INSILYQRGIYQPETFRRESKYGLTVLTTTDEGLLKYLNNIMSQMESWLLDGDVQRLVVVVTGVDSGETLERWQFNVSVDDKEKQAGKSNGNENDAAGINTKNINLPDGTKGKTGKSVRDIHNEIQAIIRQITASVTFLPLLNEPCSFDLLVYTNQTAVVPQKWEDSDPRYIMNSQEVKLRSFTTSVHKVESMVAYK 223
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A5A8DN77_CAFRO (HORMA domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DN77_CAFRO) HSP 1 Score: 200 bits (508), Expect = 4.970e-62 Identity = 95/182 (52.20%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRPDE 552
+ S+L+QRG+Y P++F + AKY + LV+TDEGLK YL +V+ Q+ GWLL+ ++Q+LV+VI G DSGETLERW FN+ ++ V S+ + + KEI++EI +IRQIT+SV+FLP+L EPC+FDLLVYTD DA VP W++SD + IKD +++LRSF+T++HKV VSY+ D+
Sbjct: 31 INSILFQRGIYPPETFDKVAKYGLPMLVSTDEGLKSYLSHVLTQISGWLLEGKVQKLVVVITGADSGETLERWVFNISPDKAAVTGGKSSDKPL----KEIQQEIAGIIRQITASVSFLPLLSEPCAFDLLVYTDPDAVVPRAWEDSDPRYIKDGEDMQLRSFTTRVHKVSAAVSYRRGDDD 208
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Match: A0A7S0LS95_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS95_9EUKA) HSP 1 Score: 201 bits (510), Expect = 5.770e-62 Identity = 100/180 (55.56%), Postives = 131/180 (72.78%), Query Frame = 1
Query: 7 VRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWLLDSELQRLVLVIVGTDSGETLERWTFNVHKEERPVLQDGSNTQAVRKSKKEIKKEIQNVIRQITSSVTFLPMLDEPCSFDLLVYTDNDAKVPTGWDESDSKCIKDSSEVKLRSFSTKIHKVDTVVSYKNRP 546
+ S+LYQRG+Y P+SF R +KY + LVTT+ GL YL++V+EQLK WL +Q+LV+ + G + ETLERW F V + V +G+ V K +KE+ EIQ +IRQIT+SVTFLP+LDEPC+FDLLVYTD+D +VP W+ESD K I +S EVKLRSF+TK+HKVD V+YK P
Sbjct: 62 INSILYQRGIYPPESFKRVSKYGLAMLVTTEPGLVTYLKSVLEQLKEWLAKGNVQKLVIAVTGQSTNETLERWVFEVQTDSAAVGANGT----VDKPEKEVMSEIQAIIRQITASVTFLPLLDEPCTFDLLVYTDDDVEVPKAWEESDPKYIANSDEVKLRSFTTKVHKVDASVTYKADP 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46418.11733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46418.11733.1 >prot_H-elongata_contig46418.11733.1 ID=prot_H-elongata_contig46418.11733.1|Name=mRNA_H-elongata_contig46418.11733.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp MGVRSVLYQRGVYHPDSFAREAKYDITTLVTTDEGLKKYLENVIEQLKGWback to top mRNA from alignment at H-elongata_contig46418:1049..2639+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46418.11733.1 ID=mRNA_H-elongata_contig46418.11733.1|Name=mRNA_H-elongata_contig46418.11733.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1591bp|location=Sequence derived from alignment at H-elongata_contig46418:1049..2639+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46418:1049..2639+ >mRNA_H-elongata_contig46418.11733.1 ID=mRNA_H-elongata_contig46418.11733.1|Name=mRNA_H-elongata_contig46418.11733.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig46418:1049..2639+ (Himanthalia elongata Himel1 dioecious)back to top |