mRNA_H-elongata_contig46304.11720.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: D8LGT5_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT5_ECTSI) HSP 1 Score: 245 bits (626), Expect = 1.230e-74 Identity = 117/158 (74.05%), Postives = 133/158 (84.18%), Query Frame = 1
Query: 10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGFRGNE 483
Y DF+ + GLQ+KDAKVG+G + GDRVV WDGYTIGYNGN+FE+NKGPKGG +D+D+ S RFVVG G +IPGLEEGI G++AGGVRQIVVPPELGYPEGDR H+ VGPKPSTFSG RALDFVLSNPGYIDKTLLF V+VVRVDKPG R R +
Sbjct: 126 YPDFKDLDKGLQYKDAKVGAGRAVTDGDRVVFDWDGYTIGYNGNLFETNKGPKGGDFDKDKDSSRFVVGSGTIIPGLEEGIKGMQAGGVRQIVVPPELGYPEGDRKHDRVGPKPSTFSGTRALDFVLSNPGYIDKTLLFTVKVVRVDKPGDRASRSGK 283
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7S2WEE0_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEE0_9STRA) HSP 1 Score: 207 bits (528), Expect = 3.470e-61 Identity = 101/159 (63.52%), Postives = 120/159 (75.47%), Query Frame = 1
Query: 1 RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGFRG 477
R Y DF T+SGLQ+KD + GSGS A+ GDRVVI W+GYTIGY G FE+ KGGA+ ED+ +RFVVGK VIP LEE + G++ G +RQI++PPELGYP D SH+ VGPKP+TFSG RALDFVL N G IDKTLL N+ V RVDKPG+RGF G
Sbjct: 42 RITYPDFTLTKSGLQYKDVRAGSGSAAAVGDRVVIDWEGYTIGYYGRPFEAKGKVKGGAFSEDKDYYRFVVGKRSVIPALEEAVQGMQPGAIRQIIIPPELGYPPSDPSHSQVGPKPTTFSGERALDFVLENKGLIDKTLLINLEVKRVDKPGERGFSG 200
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A835ZI71_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI71_9STRA) HSP 1 Score: 201 bits (511), Expect = 4.850e-59 Identity = 101/158 (63.92%), Postives = 112/158 (70.89%), Query Frame = 1
Query: 1 RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGFR 474
R Y DF SGLQ+KD KVGSG S GDRVVI W+GYTIGY G F+ KGGA+ D RF +G G VIP L E + +K GGVRQI+VP E+GYPE DR H VGPKPSTFSGNRALDFVL N G IDKTLLFNV + RVDKPGQRGF+
Sbjct: 13 RAKYPDFVELPSGLQYKDIKVGSGEKPSTGDRVVIDWEGYTIGYYGRPFQLKNSVKGGAFAADTDFLRFTLGDGTVIPALNEALATMKEGGVRQIIVPNEIGYPESDRGHTRVGPKPSTFSGNRALDFVLQNKGIIDKTLLFNVELKRVDKPGQRGFK 170
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: L1J2M3_GUITC (Peptidylprolyl isomerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J2M3_GUITC) HSP 1 Score: 189 bits (479), Expect = 3.050e-54 Identity = 92/153 (60.13%), Postives = 111/153 (72.55%), Query Frame = 1
Query: 10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
Y DF T SGLQ+KD KVG+G GDRVV W+GYTIGY G +F++ G KGGA+ ++ R V+G VIPGLEEG+ G+K GG+RQ+VV PELGYPE D SH VGPKPSTF G RAL+FVL N G IDKTLLFN++V+R+DK G
Sbjct: 16 YPDFVATPSGLQYKDVKVGNGESPEDGDRVVFDWEGYTIGYYGRIFQAKNGVKGGAFADETDFQRCVLGSHTVIPGLEEGLKGMKVGGIRQLVVTPELGYPEDDPSHTRVGPKPSTFDGQRALNFVLFNKGLIDKTLLFNIKVIRIDKKDGDG 168
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A6U4NEY8_HEMAN (Peptidylprolyl isomerase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4NEY8_HEMAN) HSP 1 Score: 192 bits (488), Expect = 4.660e-54 Identity = 95/154 (61.69%), Postives = 115/154 (74.68%), Query Frame = 1
Query: 10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPP-ELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
Y DF +T SGLQFKDAK G+GS S GDRVVI W+GYTIGY G +F+ GGA+ +D +RFV+G G ++PGL+EGI G+K GGVRQIVVPP EL YP D H VGP+PSTF G RAL+FVL N G IDKTLLFNV+++RVDK ++G
Sbjct: 131 YPDFTSTPSGLQFKDAKQGTGSSPSDGDRVVIDWEGYTIGYYGRIFQKKNSVVGGAFADDPGYYRFVLGSGSLLPGLDEGIRGMKPGGVRQIVVPPGELNYPADDSGHKRVGPRPSTFDGMRALNFVLENKGLIDKTLLFNVKLIRVDKKNEQG 284
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7S0VSM8_9CRYP (Peptidylprolyl isomerase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSM8_9CRYP) HSP 1 Score: 185 bits (470), Expect = 2.110e-51 Identity = 91/154 (59.09%), Postives = 111/154 (72.08%), Query Frame = 1
Query: 10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPP-ELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
Y D+ +TESGLQ+KDAK G G GDRVVI W+GYTIGY G +F+ GGA+ +D +RFV+G G ++PGLEEGI G+K GGVRQIVVPP L YP D H VGP+PSTF G RAL+FV+ N G IDKTLLFNV+++RVDK +G
Sbjct: 131 YPDYVSTESGLQYKDAKQGKGESPGDGDRVVIDWEGYTIGYYGRIFQKKNSVVGGAFADDPGYYRFVLGTGSLLPGLEEGIKGMKPGGVRQIVVPPGPLNYPIDDSGHKRVGPRPSTFDGMRALNFVMENKGLIDKTLLFNVKLIRVDKKNDKG 284
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A0G4END1_VITBC (Peptidylprolyl isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4END1_VITBC) HSP 1 Score: 181 bits (458), Expect = 4.370e-51 Identity = 91/156 (58.33%), Postives = 114/156 (73.08%), Query Frame = 1
Query: 1 RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGP-KGGAYDE----DRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYP-EGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVD 450
R Y DF+ T SGLQFKD K G G+P +KGDRVV+ W+GYTIGY G +FE G KG A+ + D RFVVG G VIP ++E + +K GG+RQIVVPPE+GYP E D +H +VGPKPSTFSG R+L+FVL N G +DKTLLFN++++RVD
Sbjct: 16 RAKYPDFEQTASGLQFKDVKEGEGTPPAKGDRVVLDWEGYTIGYYGRIFEKKSGVVKGSAFADNVYNDPKLMRFVVGSGSVIPAIDEAVQSMKPGGIRQIVVPPEIGYPMEKDPNHEMVGPKPSTFSGQRSLNFVLENQGLVDKTLLFNLKLLRVD 171
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7S4G9W0_9EUGL (Peptidylprolyl isomerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G9W0_9EUGL) HSP 1 Score: 180 bits (456), Expect = 3.910e-50 Identity = 90/156 (57.69%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 10 YRDFQTTESGLQFKDAKVGSGSP-ASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASF-RFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPP-ELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
Y DF TT SGLQFKDAK+G G A+ GDRVV W+GYTIGY G F+ + GP+GGA+ ED ++ R+V+G G VI GLEEG+ G++ G VRQ+++P LGYP D +H VGP P+TFSG RAL+FVL N IDKT+L NV+V R+DKPG++G
Sbjct: 71 YSDFVTTASGLQFKDAKLGGGDKVAAPGDRVVFLWEGYTIGYFGRPFQKSNGPQGGAFAEDDPAYTRYVLGSGGVIQGLEEGLTGMREGAVRQLIIPAGPLGYPPTDPNHTTVGPAPNTFSGMRALNFVLENTENIDKTILINVKVARIDKPGEKG 226
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A5J4Z9W9_PORPP (Peptidylprolyl isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9W9_PORPP) HSP 1 Score: 181 bits (458), Expect = 8.860e-50 Identity = 86/148 (58.11%), Postives = 109/148 (73.65%), Query Frame = 1
Query: 10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDE-DRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVD 450
Y DF T+SGLQ+KD +VG+G +GDR V+ W+GYTIGY G +FE+ +GGA+D D+ FRFV+G G IP L+E + ++ GGVRQ++VPPELGYP D H VGP+PSTFSG RALDFVL N G IDKTLL N+++VRVD
Sbjct: 129 YSDFVRTDSGLQYKDVRVGTGKQPEEGDRAVLKWEGYTIGYLGRIFEAKGKAQGGAFDSADKDYFRFVLGSGTAIPALDEAVRSMREGGVRQVIVPPELGYPASDPRHEKVGPRPSTFSGQRALDFVLENRGLIDKTLLINIQLVRVD 276
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7J7IDC6_9RHOD (Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDC6_9RHOD) HSP 1 Score: 179 bits (454), Expect = 3.820e-49 Identity = 88/160 (55.00%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 1 RPPYRDFQTTESGLQFKDAKVGSGSPASK-GDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYP-EG-DRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGF 471
R Y DF T SG+Q++D +VG + GDRVVI W GYTIGY G +FE+ +GGA+ +DR R+V+G+GE+IP LEE ++ + GG+RQ++VPPE GYP +G D SH+ VGPKP TFSG RAL+FVL N G +DKTLLFNV ++R+D+PG+ GF
Sbjct: 120 RMRYSDFATLPSGVQYRDVRVGDSLNTPRTGDRVVISWSGYTIGYYGRIFEAKNRVQGGAFGDDREYSRYVLGRGELIPALEEALLTMHPGGIRQVIVPPEHGYPLDGTDWSHDRVGPKPRTFSGMRALNFVLENKGLVDKTLLFNVELIRIDRPGEHGF 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig46304.11720.1 >prot_H-elongata_contig46304.11720.1 ID=prot_H-elongata_contig46304.11720.1|Name=mRNA_H-elongata_contig46304.11720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFEback to top mRNA from alignment at H-elongata_contig46304:229..2728+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig46304.11720.1 ID=mRNA_H-elongata_contig46304.11720.1|Name=mRNA_H-elongata_contig46304.11720.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2500bp|location=Sequence derived from alignment at H-elongata_contig46304:229..2728+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig46304:229..2728+ >mRNA_H-elongata_contig46304.11720.1 ID=mRNA_H-elongata_contig46304.11720.1|Name=mRNA_H-elongata_contig46304.11720.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig46304:229..2728+ (Himanthalia elongata Himel1 dioecious)back to top |