mRNA_H-elongata_contig46304.11720.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig46304.11720.1
Unique NamemRNA_H-elongata_contig46304.11720.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: D8LGT5_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT5_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.230e-74
Identity = 117/158 (74.05%), Postives = 133/158 (84.18%), Query Frame = 1
Query:   10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGFRGNE 483
            Y DF+  + GLQ+KDAKVG+G   + GDRVV  WDGYTIGYNGN+FE+NKGPKGG +D+D+ S RFVVG G +IPGLEEGI G++AGGVRQIVVPPELGYPEGDR H+ VGPKPSTFSG RALDFVLSNPGYIDKTLLF V+VVRVDKPG R  R  +
Sbjct:  126 YPDFKDLDKGLQYKDAKVGAGRAVTDGDRVVFDWDGYTIGYNGNLFETNKGPKGGDFDKDKDSSRFVVGSGTIIPGLEEGIKGMQAGGVRQIVVPPELGYPEGDRKHDRVGPKPSTFSGTRALDFVLSNPGYIDKTLLFTVKVVRVDKPGDRASRSGK 283          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7S2WEE0_9STRA (Peptidylprolyl isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEE0_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.470e-61
Identity = 101/159 (63.52%), Postives = 120/159 (75.47%), Query Frame = 1
Query:    1 RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGFRG 477
            R  Y DF  T+SGLQ+KD + GSGS A+ GDRVVI W+GYTIGY G  FE+    KGGA+ ED+  +RFVVGK  VIP LEE + G++ G +RQI++PPELGYP  D SH+ VGPKP+TFSG RALDFVL N G IDKTLL N+ V RVDKPG+RGF G
Sbjct:   42 RITYPDFTLTKSGLQYKDVRAGSGSAAAVGDRVVIDWEGYTIGYYGRPFEAKGKVKGGAFSEDKDYYRFVVGKRSVIPALEEAVQGMQPGAIRQIIIPPELGYPPSDPSHSQVGPKPTTFSGERALDFVLENKGLIDKTLLINLEVKRVDKPGERGFSG 200          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A835ZI71_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI71_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.850e-59
Identity = 101/158 (63.92%), Postives = 112/158 (70.89%), Query Frame = 1
Query:    1 RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGFR 474
            R  Y DF    SGLQ+KD KVGSG   S GDRVVI W+GYTIGY G  F+     KGGA+  D    RF +G G VIP L E +  +K GGVRQI+VP E+GYPE DR H  VGPKPSTFSGNRALDFVL N G IDKTLLFNV + RVDKPGQRGF+
Sbjct:   13 RAKYPDFVELPSGLQYKDIKVGSGEKPSTGDRVVIDWEGYTIGYYGRPFQLKNSVKGGAFAADTDFLRFTLGDGTVIPALNEALATMKEGGVRQIIVPNEIGYPESDRGHTRVGPKPSTFSGNRALDFVLQNKGIIDKTLLFNVELKRVDKPGQRGFK 170          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: L1J2M3_GUITC (Peptidylprolyl isomerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J2M3_GUITC)

HSP 1 Score: 189 bits (479), Expect = 3.050e-54
Identity = 92/153 (60.13%), Postives = 111/153 (72.55%), Query Frame = 1
Query:   10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
            Y DF  T SGLQ+KD KVG+G     GDRVV  W+GYTIGY G +F++  G KGGA+ ++    R V+G   VIPGLEEG+ G+K GG+RQ+VV PELGYPE D SH  VGPKPSTF G RAL+FVL N G IDKTLLFN++V+R+DK    G
Sbjct:   16 YPDFVATPSGLQYKDVKVGNGESPEDGDRVVFDWEGYTIGYYGRIFQAKNGVKGGAFADETDFQRCVLGSHTVIPGLEEGLKGMKVGGIRQLVVTPELGYPEDDPSHTRVGPKPSTFDGQRALNFVLFNKGLIDKTLLFNIKVIRIDKKDGDG 168          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A6U4NEY8_HEMAN (Peptidylprolyl isomerase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4NEY8_HEMAN)

HSP 1 Score: 192 bits (488), Expect = 4.660e-54
Identity = 95/154 (61.69%), Postives = 115/154 (74.68%), Query Frame = 1
Query:   10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPP-ELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
            Y DF +T SGLQFKDAK G+GS  S GDRVVI W+GYTIGY G +F+      GGA+ +D   +RFV+G G ++PGL+EGI G+K GGVRQIVVPP EL YP  D  H  VGP+PSTF G RAL+FVL N G IDKTLLFNV+++RVDK  ++G
Sbjct:  131 YPDFTSTPSGLQFKDAKQGTGSSPSDGDRVVIDWEGYTIGYYGRIFQKKNSVVGGAFADDPGYYRFVLGSGSLLPGLDEGIRGMKPGGVRQIVVPPGELNYPADDSGHKRVGPRPSTFDGMRALNFVLENKGLIDKTLLFNVKLIRVDKKNEQG 284          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7S0VSM8_9CRYP (Peptidylprolyl isomerase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSM8_9CRYP)

HSP 1 Score: 185 bits (470), Expect = 2.110e-51
Identity = 91/154 (59.09%), Postives = 111/154 (72.08%), Query Frame = 1
Query:   10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPP-ELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
            Y D+ +TESGLQ+KDAK G G     GDRVVI W+GYTIGY G +F+      GGA+ +D   +RFV+G G ++PGLEEGI G+K GGVRQIVVPP  L YP  D  H  VGP+PSTF G RAL+FV+ N G IDKTLLFNV+++RVDK   +G
Sbjct:  131 YPDYVSTESGLQYKDAKQGKGESPGDGDRVVIDWEGYTIGYYGRIFQKKNSVVGGAFADDPGYYRFVLGTGSLLPGLEEGIKGMKPGGVRQIVVPPGPLNYPIDDSGHKRVGPRPSTFDGMRALNFVMENKGLIDKTLLFNVKLIRVDKKNDKG 284          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A0G4END1_VITBC (Peptidylprolyl isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4END1_VITBC)

HSP 1 Score: 181 bits (458), Expect = 4.370e-51
Identity = 91/156 (58.33%), Postives = 114/156 (73.08%), Query Frame = 1
Query:    1 RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGP-KGGAYDE----DRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYP-EGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVD 450
            R  Y DF+ T SGLQFKD K G G+P +KGDRVV+ W+GYTIGY G +FE   G  KG A+ +    D    RFVVG G VIP ++E +  +K GG+RQIVVPPE+GYP E D +H +VGPKPSTFSG R+L+FVL N G +DKTLLFN++++RVD
Sbjct:   16 RAKYPDFEQTASGLQFKDVKEGEGTPPAKGDRVVLDWEGYTIGYYGRIFEKKSGVVKGSAFADNVYNDPKLMRFVVGSGSVIPAIDEAVQSMKPGGIRQIVVPPEIGYPMEKDPNHEMVGPKPSTFSGQRSLNFVLENQGLVDKTLLFNLKLLRVD 171          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7S4G9W0_9EUGL (Peptidylprolyl isomerase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G9W0_9EUGL)

HSP 1 Score: 180 bits (456), Expect = 3.910e-50
Identity = 90/156 (57.69%), Postives = 115/156 (73.72%), Query Frame = 1
Query:   10 YRDFQTTESGLQFKDAKVGSGSP-ASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASF-RFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPP-ELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRG 468
            Y DF TT SGLQFKDAK+G G   A+ GDRVV  W+GYTIGY G  F+ + GP+GGA+ ED  ++ R+V+G G VI GLEEG+ G++ G VRQ+++P   LGYP  D +H  VGP P+TFSG RAL+FVL N   IDKT+L NV+V R+DKPG++G
Sbjct:   71 YSDFVTTASGLQFKDAKLGGGDKVAAPGDRVVFLWEGYTIGYFGRPFQKSNGPQGGAFAEDDPAYTRYVLGSGGVIQGLEEGLTGMREGAVRQLIIPAGPLGYPPTDPNHTTVGPAPNTFSGMRALNFVLENTENIDKTILINVKVARIDKPGEKG 226          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A5J4Z9W9_PORPP (Peptidylprolyl isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9W9_PORPP)

HSP 1 Score: 181 bits (458), Expect = 8.860e-50
Identity = 86/148 (58.11%), Postives = 109/148 (73.65%), Query Frame = 1
Query:   10 YRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFESNKGPKGGAYDE-DRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVD 450
            Y DF  T+SGLQ+KD +VG+G    +GDR V+ W+GYTIGY G +FE+    +GGA+D  D+  FRFV+G G  IP L+E +  ++ GGVRQ++VPPELGYP  D  H  VGP+PSTFSG RALDFVL N G IDKTLL N+++VRVD
Sbjct:  129 YSDFVRTDSGLQYKDVRVGTGKQPEEGDRAVLKWEGYTIGYLGRIFEAKGKAQGGAFDSADKDYFRFVLGSGTAIPALDEAVRSMREGGVRQVIVPPELGYPASDPRHEKVGPRPSTFSGQRALDFVLENRGLIDKTLLINIQLVRVD 276          
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Match: A0A7J7IDC6_9RHOD (Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDC6_9RHOD)

HSP 1 Score: 179 bits (454), Expect = 3.820e-49
Identity = 88/160 (55.00%), Postives = 117/160 (73.12%), Query Frame = 1
Query:    1 RPPYRDFQTTESGLQFKDAKVGSGSPASK-GDRVVICWDGYTIGYNGNVFESNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPELGYP-EG-DRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVDKPGQRGF 471
            R  Y DF T  SG+Q++D +VG      + GDRVVI W GYTIGY G +FE+    +GGA+ +DR   R+V+G+GE+IP LEE ++ +  GG+RQ++VPPE GYP +G D SH+ VGPKP TFSG RAL+FVL N G +DKTLLFNV ++R+D+PG+ GF
Sbjct:  120 RMRYSDFATLPSGVQYRDVRVGDSLNTPRTGDRVVISWSGYTIGYYGRIFEAKNRVQGGAFGDDREYSRYVLGRGELIPALEEALLTMHPGGIRQVIVPPEHGYPLDGTDWSHDRVGPKPRTFSGMRALNFVLENKGLVDKTLLFNVELIRIDRPGEHGF 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig46304.11720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGT5_ECTSI1.230e-7474.05Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2WEE0_9STRA3.470e-6163.52Peptidylprolyl isomerase n=1 Tax=Rhizochromulina m... [more]
A0A835ZI71_9STRA4.850e-5963.92Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
L1J2M3_GUITC3.050e-5460.13Peptidylprolyl isomerase n=1 Tax=Guillardia theta ... [more]
A0A6U4NEY8_HEMAN4.660e-5461.69Peptidylprolyl isomerase n=1 Tax=Hemiselmis anders... [more]
A0A7S0VSM8_9CRYP2.110e-5159.09Peptidylprolyl isomerase n=1 Tax=Hemiselmis tepida... [more]
A0A0G4END1_VITBC4.370e-5158.33Peptidylprolyl isomerase n=2 Tax=Vitrella brassica... [more]
A0A7S4G9W0_9EUGL3.910e-5057.69Peptidylprolyl isomerase n=1 Tax=Eutreptiella gymn... [more]
A0A5J4Z9W9_PORPP8.860e-5058.11Peptidylprolyl isomerase n=1 Tax=Porphyridium purp... [more]
A0A7J7IDC6_9RHOD3.820e-4955.00Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus ya... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig46304contigH-elongata_contig46304:229..2728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.1
Seed ortholog evalue1.1e-62
Seed eggNOG ortholog2880.D8LGT5
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009987,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031976,GO:0031977,GO:0031984,GO:0034357,GO:0036211,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
EggNOG free text desc.histone peptidyl-prolyl isomerization
EggNOG OGsCOG0545@1,KOG0552@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1448
Cds size489
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig46304.11720.1prot_H-elongata_contig46304.11720.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig46304 229..1713 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930767.2605472-CDS-H-elongata_contig46304:228..3551622930767.2605472-CDS-H-elongata_contig46304:228..355Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46304 229..355 +
1691679561.0802376-CDS-H-elongata_contig46304:228..3551691679561.0802376-CDS-H-elongata_contig46304:228..355Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46304 229..355 +
1622930767.3951957-CDS-H-elongata_contig46304:904..10771622930767.3951957-CDS-H-elongata_contig46304:904..1077Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46304 905..1077 +
1691679561.0905054-CDS-H-elongata_contig46304:904..10771691679561.0905054-CDS-H-elongata_contig46304:904..1077Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46304 905..1077 +
1622930767.4106808-CDS-H-elongata_contig46304:1524..17131622930767.4106808-CDS-H-elongata_contig46304:1524..1713Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46304 1525..1713 +
1691679561.0990818-CDS-H-elongata_contig46304:1524..17131691679561.0990818-CDS-H-elongata_contig46304:1524..1713Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig46304 1525..1713 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930767.4268034-UTR-H-elongata_contig46304:1713..18201622930767.4268034-UTR-H-elongata_contig46304:1713..1820Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46304 1714..1820 +
1691679561.108814-UTR-H-elongata_contig46304:1713..18201691679561.108814-UTR-H-elongata_contig46304:1713..1820Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46304 1714..1820 +
1622930767.4435282-UTR-H-elongata_contig46304:1876..27281622930767.4435282-UTR-H-elongata_contig46304:1876..2728Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46304 1877..2728 +
1691679561.1227055-UTR-H-elongata_contig46304:1876..27281691679561.1227055-UTR-H-elongata_contig46304:1876..2728Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig46304 1877..2728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig46304.11720.1

>prot_H-elongata_contig46304.11720.1 ID=prot_H-elongata_contig46304.11720.1|Name=mRNA_H-elongata_contig46304.11720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
RPPYRDFQTTESGLQFKDAKVGSGSPASKGDRVVICWDGYTIGYNGNVFE
SNKGPKGGAYDEDRASFRFVVGKGEVIPGLEEGIVGVKAGGVRQIVVPPE
LGYPEGDRSHNVVGPKPSTFSGNRALDFVLSNPGYIDKTLLFNVRVVRVD
KPGQRGFRGNET*
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mRNA from alignment at H-elongata_contig46304:229..2728+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig46304.11720.1 ID=mRNA_H-elongata_contig46304.11720.1|Name=mRNA_H-elongata_contig46304.11720.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2500bp|location=Sequence derived from alignment at H-elongata_contig46304:229..2728+ (Himanthalia elongata Himel1 dioecious)
CGGCCCCCATACAGAGATTTCCAGACGACGGAGAGCGGCCTGCAATTCAA GGATGCTAAGGTTGGGTCGGGGTCTCCCGCGTCGAAGGGGGACAGAGTTG TCATATGCTGGGACGGATACACCATCGGTGAGCCGAGATCAATTCTTCAC GTGAAGCTCTTTGCCGCGCGGTTTCTTCTCGAGCACAGCGCGCATGCTCA TCAAAAGAAATGCTTCACGACGTCCCGCTCCTGTACTTGACCCGCGGCGC TGCTGGTTTTACCGCGTTACACGAAACGCGCATCGCACTGGTGACTGTGC CTGATACAATCGATCCAGGTATGGAGGCGTTTTGAATTTCTTATCGATAC TTCGGTGCCAATACTTCACAACACGCAAATGCCTCCCCACCGCGCTAATC GTGGTGAAATAACAACCAATCGTCCAAGAACACCGGTATCAGTAGCAACA ATAGCTGTGCCTAGCTTTTGGTCACCTGGTATCCTCTGCGGTTATCTACG TACAGCAGTCGAGGCCGATTTTCGCTCTTTCTGTATCTGTCAGAAGTGCG ATGATAGCGCGTTCTCCCCTCCACACACACACACTCAGCCCTTCCCTGAG GTTATCCCCGCTGGGCGTGACCTCATCCCACATCCCAGTGGTGAAAAACA CTGCGAGATTCGTGTTACCGCGACAGGCTACAACGGGAACGTATTCGAGA GCAACAAGGGTCCCAAGGGGGGGGCGTACGACGAAGACAGGGCATCTTTC CGCTTCGTAGTGGGGAAGGGCGAAGTCATCCCTGGGCTTGAGGAAGGGAT CGTGGGCGTGAAGGCGGGAGGCGTCCGGCAGATTGTGGTGCCTCCAGAGG TGCGCACCCACCCTCCTCTACCTCCTGGCGCCCCGCCCCCTTTAAATTAT TTGCGCCGCCGTTAATGGTAGGATGCGTTGGATGCCGGTACTCATCTGAA AAACTCATAAGGGCGCCGATGTCAAAACAATTCCTCTACCCTATACTTAT GTGGATTATGTGTGGTCACTCGAACCGAGAGCTGCCGATGCGATCGTGCA GCTCTATGGGGACTATGGGGACACCGACTCATCCGTGTTCTCGCTTCGAG TAACCACAGAGTTCGTCTGCACCAAGTACGAATGGATGCATAACCAATGG TATGTGGTCGATTGGGAGGGTATGTAATCGGTCTGTGCGATTGTAATATG GCGTCCTCTGTCCCCTGCCCCGATCCCTCAAACGCCTGTTCACAGCAAGA AAACTCCCATCCCGCTGACTCCCCCCTCTTCGTTTCTCCGCCACAGTTGG GCTACCCTGAGGGTGATCGCAGCCACAATGTGGTGGGACCCAAGCCTTCA ACCTTTTCTGGAAACCGAGCGCTCGACTTCGTCCTTTCTAACCCCGGCTA CATCGACAAGACTCTGCTGTTCAACGTTCGAGTCGTCCGCGTCGACAAGC CCGGGCAGAGGGGGTTCCGCGGAAACGAGACATGACTTTTTTTATTAGCA GCGATTAACTTCTAGTATTGAGCACGCCCTGCCAAGCACCTAAGACGGTT ATCTATCTCGCTGGTTATCATTTGGGAACGGGGGGGGGGGGTGCAGGGGG CGCAGATACCGTNNNNNNNNNNTCATTTGGGAACGGGGGGGGGGGGAGCT GGCGCGGCAGATACCGTACCATATTGATGGGTTCCGTGAACACCTGTGTA AAGATTCGCTCGATTCGTTCTGGTGAGAGATGCCGGCTAAACGTTACGCA AAATCCATCGACCTGCTCTCATGGTCATCATATATCATATCGGAGCGAAA TGGCTTCATTTGGAGTCTTACAACCGCGGCATTCTTCTTGCTTACACTAG GGAAGGGAAGGAGGAACGGAAGGAGAATGTCACCGCGTAGTGTCACCCCG CTCGGCGAAATGGAGCTAGGGCGATGGGCATGCAGCGCTTCAAGCCCCGA GAGCGTACTATCACCGTGCTTTCGCAGTATGTAGACGATTGCGATTCAAC GGCAGAAACAGCCCAGCGACTGCCGAGGTAACGCTTTGATGAGCTAGGCG ATAGCGTCGCAAACGGAGAGAAAGGGTGGCAAGATTCCCACCCTAATAAA AAAGAGCATAGAGGTGTGTGTAGTATGGTGCGGGGTAGACCGAGCCGCCA TGGCTCAAAAGTGTAGAATTATTTGTAGACCAGCGTGCGCTCTACAACTT CCTCTCGAAAGAAGAGGGCCGTTTGCGGCAAGTCTATGAGGTTATTATCT CGGGTGAAAAAAGAGAACGATTACAGAATTGTTGAGTCATTGTGGTAAGA TCGGTTTATGCAGTGCTATGTTTGCCGCGTTGTGTTGTACCGGTAACTGA ATTGAAGCCGAAGAGGCCAGGCCAGGCCTATCCGCACTCCTCGCGCGATT CGCAAATATTTAGGCACCATCCCCCAGGCGCTCACATCCGTGTTACTTCA AAAACTTGGAGACGACCGCTTGGATCCTTCGGCCTTCTGCCTTTTGCTCG
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Coding sequence (CDS) from alignment at H-elongata_contig46304:229..2728+

>mRNA_H-elongata_contig46304.11720.1 ID=mRNA_H-elongata_contig46304.11720.1|Name=mRNA_H-elongata_contig46304.11720.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=978bp|location=Sequence derived from alignment at H-elongata_contig46304:229..2728+ (Himanthalia elongata Himel1 dioecious)
CGGCCCCCATACAGAGATTTCCAGACGACGGAGAGCGGCCTGCAATTCAA
GGATGCTAAGGTTGGGTCGGGGTCTCCCGCGTCGAAGGGGGACAGAGTTG
TCATATGCTGGGACGGATACACCATCGCGGCCCCCATACAGAGATTTCCA
GACGACGGAGAGCGGCCTGCAATTCAAGGATGCTAAGGTTGGGTCGGGGT
CTCCCGCGTCGAAGGGGGACAGAGTTGTCATATGCTGGGACGGATACACC
ATCGGCTACAACGGGAACGTATTCGAGAGCAACAAGGGTCCCAAGGGGGG
GGCGTACGACGAAGACAGGGCATCTTTCCGCTTCGTAGTGGGGAAGGGCG
AAGTCATCCCTGGGCTTGAGGAAGGGATCGTGGGCGTGAAGGCGGGAGGC
GTCCGGCAGATTGTGGTGCCTCCAGAGGCTACAACGGGAACGTATTCGAG
AGCAACAAGGGTCCCAAGGGGGGGGCGTACGACGAAGACAGGGCATCTTT
CCGCTTCGTAGTGGGGAAGGGCGAAGTCATCCCTGGGCTTGAGGAAGGGA
TCGTGGGCGTGAAGGCGGGAGGCGTCCGGCAGATTGTGGTGCCTCCAGAG
TTGGGCTACCCTGAGGGTGATCGCAGCCACAATGTGGTGGGACCCAAGCC
TTCAACCTTTTCTGGAAACCGAGCGCTCGACTTCGTCCTTTCTAACCCCG
GCTACATCGACAAGACTCTGCTGTTCAACGTTCGAGTCGTCCGCGTCGAC
AAGCCCGGGCAGAGGGGGTTCCGCGGAAACGAGACATGATTGGGCTACCC
TGAGGGTGATCGCAGCCACAATGTGGTGGGACCCAAGCCTTCAACCTTTT
CTGGAAACCGAGCGCTCGACTTCGTCCTTTCTAACCCCGGCTACATCGAC
AAGACTCTGCTGTTCAACGTTCGAGTCGTCCGCGTCGACAAGCCCGGGCA
GAGGGGGTTCCGCGGAAACGAGACATGA
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