mRNA_H-elongata_contig206894.5925.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: D8LJU0_ECTSI (Orotidine-5'-phosphate decarboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU0_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 8.240e-20 Identity = 52/83 (62.65%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 1 GKRVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGM-SAVQQVEDAFGIPVVSIATLAHLME 246
GKRVL+VDDVIT GTAIR++ ILR+ A PAGVV+A DRQE+TGAES IG SAVQQVE+ G+PVVS+ ++HL E
Sbjct: 420 GKRVLVVDDVITAGTAIREAFGILRKEGATPAGVVIALDRQEKTGAES-----VIGTTSAVQQVEEECGVPVVSVVGMSHLTE 497
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A0G4G8I2_VITBC (Orotate phosphoribosyltransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G8I2_VITBC) HSP 1 Score: 85.1 bits (209), Expect = 2.440e-18 Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 GKRVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIG---MSAVQQVEDAFGIPVVSIATLAHLM 243
G RVL+VDDV+T GTA+R+SM+I++ A AGVV+A DRQER AE++GE+ G SAVQ+V +G+PV+SI TL HL+
Sbjct: 131 GMRVLIVDDVMTAGTAVRESMDIIKRAGCHLAGVVIALDRQERGKAEAEGEAERGGAAPQSAVQEVAGQYGVPVLSIITLQHLI 214
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A835Z0K1_9STRA (Orotidine-5'-phosphate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0K1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 4.830e-18 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 GKRVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHL 240
GKRVL+VDDVIT GTAIR++M++L A AVPAGVV+A DR E+ G +SAVQQVE FGIPVVS+ L H+
Sbjct: 421 GKRVLIVDDVITAGTAIREAMDMLTAAGAVPAGVVIALDRMEKGGGSE--------LSAVQQVEKEFGIPVVSVVCLTHI 492
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A4Q3Y1D1_9BACT (Orotate phosphoribosyltransferase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3Y1D1_9BACT) HSP 1 Score: 81.3 bits (199), Expect = 1.610e-17 Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLME 246
RVL++DDVIT GTAIR+S+EI+R A A PAG+ +A DR+ER + GE T+ SAVQ+V+ FGIP VSI +L+ L+E
Sbjct: 60 RVLIIDDVITAGTAIRESIEIIRAAGAQPAGIALALDREERGRDPATGE--TLAESAVQEVQRLFGIPCVSILSLSALIE 137
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A258N308_9GAMM (Orotate phosphoribosyltransferase n=5 Tax=unclassified Thiotrichales TaxID=939858 RepID=A0A258N308_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 2.790e-17 Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLM 243
++L+VDDVIT GTAIR+S+EI++ A A PAGVV+A DR E+ E S+VQ+VED FGIPV+ I T+AHL+
Sbjct: 119 KILIVDDVITAGTAIRESIEIIQAAGATPAGVVIALDRMEKGTGEK---------SSVQEVEDRFGIPVIPIVTMAHLI 188
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A522Q927_9BURK (Orotate phosphoribosyltransferase (Fragment) n=1 Tax=Candidimonas sp. TaxID=1912597 RepID=A0A522Q927_9BURK) HSP 1 Score: 80.9 bits (198), Expect = 5.020e-17 Identity = 44/79 (55.70%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLM 243
RV+++DDVIT GT++R+S+ ++R+A A PA V++A DR ER G +DGE S + SAVQ V A+GIPVVSIATL +M
Sbjct: 125 RVVIIDDVITAGTSVRESVGLIRQAGATPAAVLIALDRMERAG--TDGELSPL--SAVQDVSRAYGIPVVSIATLDDIM 199
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: D3RRZ7_ALLVD (Orotate phosphoribosyltransferase n=4 Tax=Allochromatium TaxID=85072 RepID=D3RRZ7_ALLVD) HSP 1 Score: 80.9 bits (198), Expect = 5.520e-17 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLM 243
R+L++DDVIT GT++R+S+EI+R A A PAGVV+A DRQER GE S AVQ+VED FG+PV S+ T+A L+
Sbjct: 119 RILIIDDVITAGTSVRESVEIIRAAGATPAGVVIALDRQER----GQGERS-----AVQEVEDQFGLPVQSLLTMADLI 188
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A5Q0EHF8_9GAMM (Orotate phosphoribosyltransferase n=1 Tax=gamma proteobacterium SS-5 TaxID=947516 RepID=A0A5Q0EHF8_9GAMM) HSP 1 Score: 80.9 bits (198), Expect = 5.620e-17 Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLME 246
RVL++DDVIT GTAIR+SM+I++ +A PAGVV+A DRQER G+ S A+Q+VE FGIPV+SI TL L+E
Sbjct: 119 RVLIIDDVITAGTAIRESMDIIQAQQARPAGVVIALDRQER----GQGQRS-----AIQEVEQEFGIPVISIVTLDQLVE 189
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A7C4I4J8_9PROT (Orotate phosphoribosyltransferase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C4I4J8_9PROT) HSP 1 Score: 80.9 bits (198), Expect = 6.860e-17 Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLM 243
RV++VDDVIT GT++R+S+E++R A A PAGV++A DR ER G S+G S SAVQ+VE A+G+PVV+IATL L+
Sbjct: 122 RVVIVDDVITAGTSVRESVELIRAAGATPAGVLIALDRMERAG--SNGALSP--RSAVQEVEAAYGMPVVAIATLDDLL 196
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Match: A0A7C1XRW7_9GAMM (Orotate phosphoribosyltransferase n=2 Tax=root TaxID=1 RepID=A0A7C1XRW7_9GAMM) HSP 1 Score: 80.5 bits (197), Expect = 7.760e-17 Identity = 41/79 (51.90%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 7 RVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGESSTIGMSAVQQVEDAFGIPVVSIATLAHLM 243
+VL++DDVIT GTAIR+SM+I+ +A A PAGV++A DRQE+ E +SA+Q+VE + IPV+SI TL HL+
Sbjct: 119 KVLIIDDVITAGTAIRESMQIIEQANATPAGVIIALDRQEKGTGE---------LSAIQEVEQQYNIPVLSIITLEHLI 188 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig206894.5925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig206894.5925.1 >prot_H-elongata_contig206894.5925.1 ID=prot_H-elongata_contig206894.5925.1|Name=mRNA_H-elongata_contig206894.5925.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp GKRVLLVDDVITGGTAIRQSMEILREAEAVPAGVVVAFDRQERTGAESDGback to top mRNA from alignment at H-elongata_contig206894:29..697+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig206894.5925.1 ID=mRNA_H-elongata_contig206894.5925.1|Name=mRNA_H-elongata_contig206894.5925.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=669bp|location=Sequence derived from alignment at H-elongata_contig206894:29..697+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig206894:29..697+ >mRNA_H-elongata_contig206894.5925.1 ID=mRNA_H-elongata_contig206894.5925.1|Name=mRNA_H-elongata_contig206894.5925.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=492bp|location=Sequence derived from alignment at H-elongata_contig206894:29..697+ (Himanthalia elongata Himel1 dioecious)back to top |