mRNA_H-elongata_contig20608.5892.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig20608.5892.1
Unique NamemRNA_H-elongata_contig20608.5892.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A6H5JYR9_9PHAE (A protein ( P-DTprotein, P-DH protein ) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYR9_9PHAE)

HSP 1 Score: 431 bits (1109), Expect = 1.640e-143
Identity = 219/287 (76.31%), Postives = 243/287 (84.67%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKMEGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVS-----SEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLEAHTKSNGNG 846
            VAR EV+YAV+PIENSLGGSIHANYDLLLRYELY++GEHDFRVEHCLLA PGTK  DVKKVMSHPQALAQCDNYLRG+ VEKV  YDTAGSAK+I+EGKMEGCAAIASDLAAEA+ M+V+ASNIEDDD+NFTRFLLLAR  VG FL+P V +KTS+VFTL N+ GALYKALACFSLREID SKIESRPTSAQLLQYLRFQ++  +G V      S      E  RFQYCFYLDFL+GELD  A+ AL+HLRE  PFC++LGSYAR S LVGPISDTLEA +   GNG
Sbjct:  130 VARREVEYAVIPIENSLGGSIHANYDLLLRYELYVIGEHDFRVEHCLLALPGTKREDVKKVMSHPQALAQCDNYLRGMNVEKVAMYDTAGSAKLIAEGKMEGCAAIASDLAAEAYGMEVLASNIEDDDMNFTRFLLLARTPVGGFLSPGVAAKTSIVFTLPNSAGALYKALACFSLREIDFSKIESRPTSAQLLQYLRFQQTTGAGGVGAGGALSNNRSNGEERRFQYCFYLDFLAGELDDKAQSALAHLRESAPFCRVLGSYARDSTLVGPISDTLEALSMGIGNG 416          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A835YRB8_9STRA (Trifunctional chorismate Mutase/Prephenate Dehydratase/Prephenate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB8_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 3.800e-130
Identity = 193/275 (70.18%), Postives = 230/275 (83.64%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGL-GVEKVPTYDTAGSAKIISEGKMEGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLEA 822
            V+  E DYAV+PIENSLGGSIHANYDLLLR+EL+I+GEHDF+VEH L+A PGTK +++K+V+SH QALAQCDNYLR + GVE+VPTYDTAGSAK+I+E  M+GCAAIAS+LAAE + ++V+A+NIEDD VNFTRFLLLARQ VG F+ P VP+KTSVVFTL NT GALYKALACFSLR+ID SKIESRPTSAQLLQYLR+Q  +             +LPRFQYCFYLDFL+ ELD AA+ AL+HLRE+ PF ++LGSY R  +LVGP+ DTLEA
Sbjct:   51 VSNREADYAVIPIENSLGGSIHANYDLLLRFELFIIGEHDFKVEHSLMALPGTKASEIKQVLSHQQALAQCDNYLRAMPGVERVPTYDTAGSAKMIAEKGMKGCAAIASELAAETYGLEVLATNIEDDHVNFTRFLLLARQPVGVFIAPPVPAKTSVVFTLPNTAGALYKALACFSLRDIDFSKIESRPTSAQLLQYLRYQLRSSGSGAGXXXGGSDDLPRFQYCFYLDFLAAELDDAAQSALAHLREVAPFMRVLGSYPRQGQLVGPVRDTLEA 325          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A1Z5KR40_FISSO (Arogenate/prephenate dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR40_FISSO)

HSP 1 Score: 340 bits (872), Expect = 2.470e-108
Identity = 174/280 (62.14%), Postives = 211/280 (75.36%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKM-------EGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLE 819
            VA  E DYA LP+ENSLGGSIH NYDL+LRY+L IV EH+FRV+HCLLA+ G K  D+K  +SHPQALAQCDN+LRGLG+  +PTYDTAGSAK+I++G         E  AAIAS LA + + M+ +   IEDDD NFTRFLLL RQ VGA++T ++P+KTSVVFTL NT GALYKALACFSLR+ID SKIESRPTSA LL +L+F KS   G  +  K D   LPRF+YCFYLDFL+ ELD   + AL+HLRE   F +ILGS+ R S+LVGP+ +  +
Sbjct:  102 VASMECDYACLPVENSLGGSIHENYDLMLRYDLTIVAEHEFRVKHCLLAKEGVKREDIKYAISHPQALAQCDNFLRGLGITPIPTYDTAGSAKMIADGGQLPDKCTPENTAAIASALAGKIYGMNCLNEGIEDDDTNFTRFLLLGRQGVGAYITKNIPAKTSVVFTLPNTAGALYKALACFSLRDIDFSKIESRPTSASLLNFLKF-KSQQLGRKARNKAD---LPRFRYCFYLDFLANELDENTQNALAHLREQADFMRILGSFPRKSRLVGPVKEAAD 377          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A7S1ZAS6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAS6_TRICV)

HSP 1 Score: 336 bits (862), Expect = 4.320e-107
Identity = 168/281 (59.79%), Postives = 210/281 (74.73%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGK--MEGC-----AAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLEA 822
            VA  EVDY  LP+ENSLGGSIH NYDL+LRY+L +V EH+FRV+HCLLA+PG K  ++K  +SHPQALAQCDNYLRGLG+  +P YDTAGSAK+I + K   +GC     AAIASDLA   + ++ +   IEDDD NFTRFLLL R  V  +L  ++PSKTS+VFTL +T GALYKALACF+LR+ID SKIESRPTSA LL +L+F+  A    +  ++ +  E  RF+YCFYLDFL+ ELD +A+ AL+HLRE   FC++LGSY   S+LVGP+ D  EA
Sbjct:   84 VASREVDYCCLPVENSLGGSIHENYDLMLRYDLTVVAEHEFRVKHCLLAKPGIKREEIKFAISHPQALAQCDNYLRGLGIAPIPVYDTAGSAKMIRDNKGLPDGCTPQNTAAIASDLAGRTYCLNCLDEGIEDDDTNFTRFLLLGRNGVSQYLGKNIPSKTSIVFTLPDTAGALYKALACFALRDIDFSKIESRPTSASLLSFLKFRSQA----MGRKRRNRAEQTRFRYCFYLDFLASELDESAQYALAHLREQADFCRVLGSYPAKSRLVGPVKDAAEA 360          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: W7U342_9STRA (Arogenate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U342_9STRA)

HSP 1 Score: 335 bits (860), Expect = 1.530e-106
Identity = 169/286 (59.09%), Postives = 213/286 (74.48%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKMEGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQ----KSADSGNVSSE--KDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLEAHTKSNG 840
            VA  E DYAV+PIENSLGGSIHANYDLLLR+EL+I+GEH+FRVEH LLA PG K  D+++VMSHPQALAQCD YLR  GV +   YDTAGSAK+I+E  +  CAAIAS+LA   + +DV+  NIEDDD NFTRFLLL+RQS+ + +   VP+KTS+VF   NTPGALYKALACF+LR+ID  KIESRPTS QL ++L+FQ    +S  SG   +     D+ +LPRF+YCFYLDFL+ +LD  AR AL  L E + + ++LGS+    +L+GPI + L+   K +G
Sbjct:  112 VATREADYAVVPIENSLGGSIHANYDLLLRHELHIIGEHEFRVEHSLLALPGVKKEDIRRVMSHPQALAQCDAYLRNWGVARESMYDTAGSAKVIAEQGLRDCAAIASELAGATYGLDVLDQNIEDDDSNFTRFLLLSRQSISSLIPHSVPAKTSIVFITPNTPGALYKALACFTLRDIDFCKIESRPTSPQLFRFLQFQQRQMRSFASGGADAAMGSGDDHDLPRFRYCFYLDFLASQLDEPARNALLQLEEQSQYVRVLGSFPTKGQLLGPIREALDLLAKESG 397          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A1E7F413_9STRA (Prephenate dehydratase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F413_9STRA)

HSP 1 Score: 312 bits (799), Expect = 4.780e-103
Identity = 167/281 (59.43%), Postives = 197/281 (70.11%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQP------GTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKME-GCA-----AIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSG---------NVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYAR 780
            VA  EVDY  LPIENSLGGSIH NYDL+LRY+L I  EH+FRV+HC+LA P      G     +K  +SHPQALAQCDNYLR L +  +PTYDTAGSAK+I +  +  GC      AIASDLA E + M+ +A  +EDDD NFTRFLLL R+ V  +L  DVPSKTSVVFTL NT GALYKALACFSLR+ID SKIESRPTSA LL YL+F+K+A+S                  + +LPRF+YCFYLDFL G+L   +  ALS+LRE T F +ILGSY R
Sbjct:   40 VASMEVDYCCLPIENSLGGSIHENYDLMLRYDLTICAEHEFRVQHCVLASPDASSILGGSGQQIKYAISHPQALAQCDNYLRSLNIRPIPTYDTAGSAKMIRDNDLPAGCTPFNTIAIASDLAGETYGMNCLAKGVEDDDSNFTRFLLLGRKGVLEYLNKDVPSKTSVVFTLPNTAGALYKALACFSLRDIDFSKIESRPTSAALLNYLKFRKAANSAVAXXXXXXXXXXXXXXXDNDLPRFRYCFYLDFLDGQLSSNSENALSNLREFTDFVRILGSYPR 320          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A7S1FR39_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR39_9STRA)

HSP 1 Score: 320 bits (820), Expect = 7.370e-103
Identity = 169/288 (58.68%), Postives = 210/288 (72.92%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKME---GC-----AAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLT----PDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERE---LPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLE 819
            V   E DYA LP+ENSLGGSIH N+DL+LRY+L +V EHD RV H LL++    I  +K  +SHPQALAQCDNYLR   +  +P YDTAG+AK+++EG ++   GC     AAIASDLAA+ + +D++ + IEDDD NFTRFLLL RQ VG  LT     DVP+KTSVVFTL NTPGALYKALACFSLR+ID SKIESRPTSA LLQ+L+F+         S K+D R    +PRF+YCFYLDFL+ E++  A+ AL HLRE + FC+ILGSY + S+LVGP+   +E
Sbjct:   21 VVNRECDYACLPVENSLGGSIHENFDLMLRYDLVVVAEHDLRVSHNLLSKQ-KDINKIKYAISHPQALAQCDNYLRSHNITPLPVYDTAGAAKMLAEGSLDLPSGCTKENTAAIASDLAAKTYGLDIVEAAIEDDDSNFTRFLLLGRQGVGCLLTGSDGKDVPAKTSVVFTLPNTPGALYKALACFSLRDIDFSKIESRPTSASLLQFLKFR---------SAKEDSRSGSLIPRFRYCFYLDFLASEMNPQAQNALHHLREQSEFCRILGSYPQKSRLVGPVKAAVE 298          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A7S4VK81_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VK81_9STRA)

HSP 1 Score: 325 bits (834), Expect = 1.750e-102
Identity = 164/286 (57.34%), Postives = 207/286 (72.38%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEG-------KMEGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLEAHTKSN 837
            VA  E DYA +P+ENSLGGSIH NYDL+LRY+L +V EH+FRV HCLL +PG K + +K  +SHPQALAQCDNYLR LG+  VP YDTAGSAKI+SEG         E  AAIASDLA + + ++ +   IEDDDVNFTRFLLL+R  +   L P +PSKTS+VFTL ++ GALYKALACF+LR+ID SKIESRPT+A LL YL+F+     G  + ++      PRF+YCFYLDFL+ E+D  ++ AL HL E + + +ILGSY + S+LVGPI+  +E    SN
Sbjct:  102 VASRECDYAFVPVENSLGGSIHENYDLMLRYDLSVVAEHEFRVHHCLLVKPGVKKSAIKYAVSHPQALAQCDNYLRSLGITPVPMYDTAGSAKILSEGVGLPDKCTPENTAAIASDLAGKTYRLNCLEKGIEDDDVNFTRFLLLSRTGIVQHLNPKIPSKTSIVFTLPDSAGALYKALACFALRDIDFSKIESRPTAASLLNYLKFRSQQAHGRKARQRSGS---PRFRYCFYLDFLASEVDEISQNALHHLNEQSDYLRILGSYPQKSRLVGPIAAAVEELKNSN 384          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A448ZNM5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNM5_9STRA)

HSP 1 Score: 323 bits (828), Expect = 7.980e-102
Identity = 172/292 (58.90%), Postives = 208/292 (71.23%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKK-------------VMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKM------EGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPISDTLE 819
            VA  EVDY  LPIENSLGGSIH NYDL+LRY+L I  EH+FRV+HC+LA+ G ++ + K               +SHPQALAQCDNYLR LG+  +PTYDTAGSAK+I +  +      +   AIASDLA   + M+ +A ++EDDD NFTRFLLL R+ V   L  DVPSKTSVVFTL NT GALYKALACFSLR+ID SKIESRPTSA LL YL+F+KS  + +   E DD  +LPRF+YCFYLDFL G+L   +  AL++LRE T F +ILGSY R S+LVGP+S   E
Sbjct:   96 VASMEVDYCCLPIENSLGGSIHENYDLMLRYDLTICAEHEFRVQHCVLAKEGVRLPEGKHDXGGDQGGXVARYAISHPQALAQCDNYLRSLGITPIPTYDTAGSAKMIRDNDLPDRCTPDNTIAIASDLAGATYGMNCLAKSVEDDDSNFTRFLLLGRKGVLEHLGKDVPSKTSVVFTLPNTAGALYKALACFSLRDIDFSKIESRPTSAALLNYLKFRKSQQT-SYGGEHDDS-DLPRFRYCFYLDFLDGQLSSNSENALANLREFTDFVRILGSYPRQSRLVGPVSVAAE 385          
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Match: A0A7S0CAL8_9STRA (Hypothetical protein n=3 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAL8_9STRA)

HSP 1 Score: 318 bits (815), Expect = 1.850e-100
Identity = 170/283 (60.07%), Postives = 200/283 (70.67%), Query Frame = 1
Query:    1 VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQPGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISE-------------GKM--EGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDVPSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQKSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTPFCKILGSYARGSKLVGPI 804
            V   E DYA +P+ENSLGGSIH NYDL+LRY+L IV EHDFRV HC L +PG K  DVK  +SH QALAQCD YLRGLG+  VPTYDTAGSAK+I+              GK   E  AAIASDLA E + +D +   IEDDD NFTRFLLL R+ V   LT  + SKTSVVFTL ++ GALYKALACFSLR+ID SKIESRPTSA LL +L+F +S   G  +  +    + PRF+YCFYLDFL+ ELD +A+ AL HLRE   FC++LGSY   SKLVGP+
Sbjct:  108 VTAMECDYACVPVENSLGGSIHENYDLMLRYDLTIVAEHDFRVRHCFLVKPGMKREDVKYAISHSQALAQCDGYLRGLGITPVPTYDTAGSAKMIANTFNGVTDGARALPGKCTPENTAAIASDLAGEIFGLDSLDKGIEDDDSNFTRFLLLGRKGVVEHLTKKISSKTSVVFTLPDSAGALYKALACFSLRDIDFSKIESRPTSASLLHFLKF-RSQIGGRTALSRS---KSPRFRYCFYLDFLASELDESAQNALHHLREQADFCRVLGSYPEKSKLVGPV 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20608.5892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYR9_9PHAE1.640e-14376.31A protein ( P-DTprotein, P-DH protein ) n=2 Tax=Ec... [more]
A0A835YRB8_9STRA3.800e-13070.18Trifunctional chorismate Mutase/Prephenate Dehydra... [more]
A0A1Z5KR40_FISSO2.470e-10862.14Arogenate/prephenate dehydratase n=2 Tax=Fistulife... [more]
A0A7S1ZAS6_TRICV4.320e-10759.79Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
W7U342_9STRA1.530e-10659.09Arogenate dehydrogenase n=2 Tax=Monodopsidaceae Ta... [more]
A0A1E7F413_9STRA4.780e-10359.43Prephenate dehydratase (Fragment) n=1 Tax=Fragilar... [more]
A0A7S1FR39_9STRA7.370e-10358.68Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S4VK81_9STRA1.750e-10257.34Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZNM5_9STRA7.980e-10258.90Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0CAL8_9STRA1.850e-10060.07Hypothetical protein n=3 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20608contigH-elongata_contig20608:2834..6552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.9
Seed ortholog evalue2.9e-119
Seed eggNOG ortholog2880.D8LBQ3
Preferred nameTYR1
KEGG rclassRC00002,RC00017,RC00125
KEGG koko:K00211,ko:K00852,ko:K12586,ko:K15227
KEGG ReactionR00733,R01051,R01730,R02750
KEGG Pathwayko00030,ko00400,ko01100,ko01110,ko01130,ko01230,ko03018,map00030,map00400,map01100,map01110,map01130,map01230,map03018
KEGG ModuleM00040,M00391
GOsGO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.prephenate dehydrogenase (NADP ) activity
EggNOG OGsCOG0077@1,COG0287@1,KOG2380@2759,KOG2797@2759
EC1.3.1.13,1.3.1.78,2.7.1.15
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Hectar predicted targeting categoryother localisation
Exons5
Model size846
Cds size846
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20608.5892.1prot_H-elongata_contig20608.5892.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig20608 2834..6552 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930153.583117-CDS-H-elongata_contig20608:2833..29291622930153.583117-CDS-H-elongata_contig20608:2833..2929Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 2834..2929 +
1691679301.609646-CDS-H-elongata_contig20608:2833..29291691679301.609646-CDS-H-elongata_contig20608:2833..2929Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 2834..2929 +
1622930153.6005328-CDS-H-elongata_contig20608:4109..42431622930153.6005328-CDS-H-elongata_contig20608:4109..4243Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 4110..4243 +
1691679301.6194053-CDS-H-elongata_contig20608:4109..42431691679301.6194053-CDS-H-elongata_contig20608:4109..4243Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 4110..4243 +
1622930153.6194618-CDS-H-elongata_contig20608:4619..48091622930153.6194618-CDS-H-elongata_contig20608:4619..4809Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 4620..4809 +
1691679301.6266787-CDS-H-elongata_contig20608:4619..48091691679301.6266787-CDS-H-elongata_contig20608:4619..4809Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 4620..4809 +
1622930153.6344378-CDS-H-elongata_contig20608:5555..58161622930153.6344378-CDS-H-elongata_contig20608:5555..5816Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 5556..5816 +
1691679301.633929-CDS-H-elongata_contig20608:5555..58161691679301.633929-CDS-H-elongata_contig20608:5555..5816Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 5556..5816 +
1622930153.649155-CDS-H-elongata_contig20608:6387..65521622930153.649155-CDS-H-elongata_contig20608:6387..6552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 6388..6552 +
1691679301.6485915-CDS-H-elongata_contig20608:6387..65521691679301.6485915-CDS-H-elongata_contig20608:6387..6552Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig20608 6388..6552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig20608.5892.1

>prot_H-elongata_contig20608.5892.1 ID=prot_H-elongata_contig20608.5892.1|Name=mRNA_H-elongata_contig20608.5892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=282bp
VARHEVDYAVLPIENSLGGSIHANYDLLLRYELYIVGEHDFRVEHCLLAQ
PGTKIADVKKVMSHPQALAQCDNYLRGLGVEKVPTYDTAGSAKIISEGKM
EGCAAIASDLAAEAWNMDVIASNIEDDDVNFTRFLLLARQSVGAFLTPDV
PSKTSVVFTLANTPGALYKALACFSLREIDCSKIESRPTSAQLLQYLRFQ
KSADSGNVSSEKDDERELPRFQYCFYLDFLSGELDYAARCALSHLRELTP
FCKILGSYARGSKLVGPISDTLEAHTKSNGNG
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mRNA from alignment at H-elongata_contig20608:2834..6552+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig20608.5892.1 ID=mRNA_H-elongata_contig20608.5892.1|Name=mRNA_H-elongata_contig20608.5892.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3719bp|location=Sequence derived from alignment at H-elongata_contig20608:2834..6552+ (Himanthalia elongata Himel1 dioecious)
GTTGCCCGACACGAGGTGGATTACGCCGTGTTGCCCATCGAAAACTCTTT AGGAGGGTCGATCCACGCTAATTACGACTTGCTCTTGAGATACGAGGTGA GGTGAGGTGATGTATGTGTGTCCGCGCCACCCGACTCCAGGAGGCAAAAT CGATTCGATTGTACGGATCGTCTGCTAGGCGCTGTCATTCAGATTCGTGT GGCGCGCGACGTGCGTAATGGTGACGTGTCTGTCACGTCAAACACCTCTT TGGTGTCCGCGGAAAGGGAGAGCTGTGTAGGAGATAAGCCCGTCTCCTTG CATGGACATTTTGTTCCGTTTTATCTTCCTTTTAGAGCCCCTTTCTGTCC ATATTCTTTCTGTATCGCCAAATGGTCCCTCTCGAGCAACTTGGCAGCAG CGATTGCCGTAGATCTGCAAGAGGGGGCGTACTACCGTAGCGCCGTTGTG AGTTTTACAGGAGGCATGTTTGGCCTTGATCGCCACACCACCGAAATTGG CCTAAACAACGAAGCACCACTCGAAGCACACCGCGGCGGCGCCCCTTTAA ACTTGGCGTCGCTGTGGTCGTGGCCCGGCCGTAGCGATACGGCTGGGCGC ATTCCTTTTCCCAGCGAAAGCTGTGTTTCCCTAGAAACAAAAGGGAACGA GGTGAACGAGGTGCAATATTGACCACGAAAACGCGGCGCTGTGTGTACAG CCTTGCTCCTTACTCCCGTGAGCGAATTGCTGAAGAATCAGTCGCGACAT TACATTCTCATTACAGAGTTCGTTAGCCTCCACTTCATTGGCGAGTTTTT GTCTGTATATTCGTGTGTGTATGTGTGTACGTGTGTTCTTGTTTATGCGG ATACATGTCTTTGTGTCTTTTGTGTGCGTGTTTGTTCCTTCTCAAGCGGG TGAAGTCAGTTAAACCGGGCTCGTTCTTTGGATAAGAAAATAGAGAAATA GTTATAACAGCAGATACGCGAATTAACGATACCCCTAGGTAGTTCATGGC CGTTACACGAATTAGCGATGTCCTTCGATCCCACGGTCCACTGTTACTGT CGACCCAATCCGCCCATTTGTCTGTGGTTTGGGGGCCTTTGAAGACCCCT TTCACAGAGTTCTAATGAGGTATTTCGCGCACCGCGGTAAAATGTGCTTG TATACCGGAACCGCCACAAACAAGCAGGGTTTCCGTGCGCCCGATCACCG CGAGGCGGACGTGCGGCGAGCCGACAGCAGCAGCTGTTACTCTTAACCCC CGCCGATTCAATCCACGATCTGACAGCTTTACATCGTTGGAGAGCACGAC TTCCGCGTAGAGCACTGCCTCCTGGCGCAACCGGGGACGAAGATTGCGGA CGTGAAAAAGGTCATGAGTCATCCGCAGGCACTGGCGCAGTGCGACAACT ACCTGCGTGGGTGAGACCCCGACGGACGATCGCTGTTAAATTTTACACAG GAGTAGTGCCTTTGTCGGATTGATGCCCCCCCCCCATCCCCCTTTTTGCC TTTCGGTAAAATGCTGTGCCATCTTGCTGTAGAAGCGGTACCCCCTTGAT CGCGAGAATGGTGGTAAAAAGGGTTGACGTGAGGCAGCCATTATTGTGAA TGTGCGCGAAGGCATTTGTGGTAGCTCTAGTATATAGGAGCCGAGGTGCT TGACCGTCCGTGTTTTGCGATTTATCTCGCCCGTGGTAGCAATGCACCTG GGAGGCGAACAATGGGTCCAAACGGCGCACGTATTTTCTCTTAGACCCCT CGGTTGTGGTCCTTCGCGTATATTTGCGTTCGTTAGCCTGGGCGTGGAGA AAGTGCCCACGTACGACACCGCAGGCAGCGCGAAGATCATCTCGGAAGGG AAGATGGAGGGATGCGCCGCGATCGCGTCCGACCTCGCGGCGGAGGCTTG GAACATGGACGTCATCGCGTCCAACATCGAAGACGATGACGTCAACTTCA CCAGGTTTCTTCTTCTAGCCCGACAGGTGCGGTAGTCCCCGACAAAAGCT AGATCCAGCGAGACCGGCTCGCCCTGAGCGATAATCTTGTTATTTGGTGT ATTTATGTATATGAGTGTGAGTGTGTGTGTGTATTTATTAAATTGCACAC AACCGCACAATCCGGCTCTCTCAATGGGTGTGTGTGTGTGTGTGTCTTAT TCAGCACAACGCTTTCCCTAAAGTAAATCCTGCAGAATCGATTCTAGAAA ACATGTTTGGTGCCGGCAAGGTAAATAGAACCAATTCCGCACGCGAAAAA CATACGATATAGTCCAAGTGACGTAATGTGTGGTGGATGTTGGTGTCTCG CGGAGGAGGGTGGGGGGTACCTGTGCTCGACGCATATCGTATTATAGCGG ACATACACCGCACATCCCAACTATAACGGGACAGAGTGATTTGCCGGGTT TTCGCCGGTCAGGCTGGTTTCACAAGGGTGATACCAGTAGTTTGAGTCAT AATCATTGCGTTTGCTACGCCAAACCGGACATGCCATGGGTTAATTTTTT TACATTTAGCGGACGCGCGACTACAACTCCAAATACTGCAACGGACGGAC GGGGAGGGTGGCACAAACACCCTTCACGCGATCCACAACCAGCACGCAGT GATGAAGAAAGGGTGCGGCTTTAACGAGCCGCCTCTTGCCCTACATACCG TGCATGTGTTTGTCGCCTGGTGCTTGACGCGATATACCCTCGTCGCTGTT GTCGTGACGCTGGCCGAGGCAGTCGGTGGGGGCGTTTCTGACGCCGGACG TTCCGTCCAAGACCAGCGTGGTTTTCACGCTCGCCAACACGCCCGGGGCG TTGTACAAGGCTCTGGCTTGCTTCAGCCTTAGAGAGATCGATTGCTCCAA GATCGAATCCAGGCCGACTTCCGCGCAGCTCTTGCAGTACCTCCGCTTCC AAAAGTCCGCCGACTCCGGAAACGTCAGTTCTGAGAAAGACGACGAGCGC GAGCTGCCGCGCTTCCAGTATTGTTTTTACCTGGTGCGTCCGGCTGGCAG GATTGAGAAGGACGACGACGTTGCTCTGTAGCTCAGCGGTTTCAGTAGTC AAGGCGATGTCTAACCGCCGTTGAAAAAAACGACCTGATCATTACATGGC GGTGATGATGATGATCGTATCGTCATGACCACGATGCAGCAGAGGGCTAG TGCTTGGGAATCACCCCGAGAGATATATTTGTGTTTTTGTGCGTTTTGTC CGATTGCTTGGTCCCGCTGAAATACATCTCAATACCCAAGAGTATAGGTG TGTATATCTTTCTATTTGTATGTATAGAAAACGAAATCATTATACTTGAT ACTATGAATACTTAAGTACCTGTTCTACACTACGCAGTAAATCTTAACTC GTCAAAGGAAAGTAGAGAGCTGCACGCCTTACATTCCTGGGTACGGGATT CTCTATCTCTCTCTCTCTCTCTCTCGCAAGACTGTTTCGCAAGGCGTGGG CCTGCCTGTCTGCCTGTCTGCCCCGCCGTTCTTCTCTCTCCTCCCCCGTG ACCCGCGACGGGGAAAATGAAAACATGGGTGCCCTTTTCTCTCTAAACCG GTAGGACTTTCTCTCGGGAGAACTGGACTACGCGGCGCGCTGTGCTCTGT CGCACCTTCGCGAATTGACGCCATTCTGCAAGATTTTGGGCTCGTATGCT CGGGGCAGCAAGCTCGTGGGACCGATCAGCGACACTCTGGAGGCACACAC GAAGAGCAACGGCAACGGC
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Coding sequence (CDS) from alignment at H-elongata_contig20608:2834..6552+

>mRNA_H-elongata_contig20608.5892.1 ID=mRNA_H-elongata_contig20608.5892.1|Name=mRNA_H-elongata_contig20608.5892.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1692bp|location=Sequence derived from alignment at H-elongata_contig20608:2834..6552+ (Himanthalia elongata Himel1 dioecious)
GTTGCCCGACACGAGGTGGATTACGCCGTGTTGCCCATCGAAAACTCTTT
AGGAGGGTCGATCCACGCTAATTACGACTTGCTCTTGAGATACGAGGTTG
CCCGACACGAGGTGGATTACGCCGTGTTGCCCATCGAAAACTCTTTAGGA
GGGTCGATCCACGCTAATTACGACTTGCTCTTGAGATACGAGCTTTACAT
CGTTGGAGAGCACGACTTCCGCGTAGAGCACTGCCTCCTGGCGCAACCGG
GGACGAAGATTGCGGACGTGAAAAAGGTCATGAGTCATCCGCAGGCACTG
GCGCAGTGCGACAACTACCTGCGTGGCTTTACATCGTTGGAGAGCACGAC
TTCCGCGTAGAGCACTGCCTCCTGGCGCAACCGGGGACGAAGATTGCGGA
CGTGAAAAAGGTCATGAGTCATCCGCAGGCACTGGCGCAGTGCGACAACT
ACCTGCGTGGCCTGGGCGTGGAGAAAGTGCCCACGTACGACACCGCAGGC
AGCGCGAAGATCATCTCGGAAGGGAAGATGGAGGGATGCGCCGCGATCGC
GTCCGACCTCGCGGCGGAGGCTTGGAACATGGACGTCATCGCGTCCAACA
TCGAAGACGATGACGTCAACTTCACCAGGTTTCTTCTTCTAGCCCGACAG
CCTGGGCGTGGAGAAAGTGCCCACGTACGACACCGCAGGCAGCGCGAAGA
TCATCTCGGAAGGGAAGATGGAGGGATGCGCCGCGATCGCGTCCGACCTC
GCGGCGGAGGCTTGGAACATGGACGTCATCGCGTCCAACATCGAAGACGA
TGACGTCAACTTCACCAGGTTTCTTCTTCTAGCCCGACAGTCGGTGGGGG
CGTTTCTGACGCCGGACGTTCCGTCCAAGACCAGCGTGGTTTTCACGCTC
GCCAACACGCCCGGGGCGTTGTACAAGGCTCTGGCTTGCTTCAGCCTTAG
AGAGATCGATTGCTCCAAGATCGAATCCAGGCCGACTTCCGCGCAGCTCT
TGCAGTACCTCCGCTTCCAAAAGTCCGCCGACTCCGGAAACGTCAGTTCT
GAGAAAGACGACGAGCGCGAGCTGCCGCGCTTCCAGTATTGTTTTTACCT
GTCGGTGGGGGCGTTTCTGACGCCGGACGTTCCGTCCAAGACCAGCGTGG
TTTTCACGCTCGCCAACACGCCCGGGGCGTTGTACAAGGCTCTGGCTTGC
TTCAGCCTTAGAGAGATCGATTGCTCCAAGATCGAATCCAGGCCGACTTC
CGCGCAGCTCTTGCAGTACCTCCGCTTCCAAAAGTCCGCCGACTCCGGAA
ACGTCAGTTCTGAGAAAGACGACGAGCGCGAGCTGCCGCGCTTCCAGTAT
TGTTTTTACCTGGACTTTCTCTCGGGAGAACTGGACTACGCGGCGCGCTG
TGCTCTGTCGCACCTTCGCGAATTGACGCCATTCTGCAAGATTTTGGGCT
CGTATGCTCGGGGCAGCAAGCTCGTGGGACCGATCAGCGACACTCTGGAG
GCACACACGAAGAGCAACGGCAACGGCGACTTTCTCTCGGGAGAACTGGA
CTACGCGGCGCGCTGTGCTCTGTCGCACCTTCGCGAATTGACGCCATTCT
GCAAGATTTTGGGCTCGTATGCTCGGGGCAGCAAGCTCGTGGGACCGATC
AGCGACACTCTGGAGGCACACACGAAGAGCAACGGCAACGGC
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